BGIOSGA014419

From RiceWiki
Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014419| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014419, complete gene.| tag = B0403H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014419

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014419, complete gene.

LocusTag

B0403H10-OSIGBA0105A11.7

Ensembl Transcript ID

BGIOSGA014419-TA

Ensembl Protein ID

BGIOSGA014419-PA

Length

4881

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29168426..29173306

Sequence Coding Region

29173202..29173306,29169513..29169970,29169250..29169394,29168668..29169125,29168426..29168504

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29168426..29173306 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29168426..29173306 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGCATGCATCGCGTGCTCCTCCAAGGAAGGCGGGGAGGACGGGTCCCGTGGCGCGGCCACGCCTCACGGCAGAGATGCCGTCAAGTCCCTCACCTCACAGCTCAAGGACATGGTGCTCAAGTTCTCCGGCTCCAACAAGCATCAGCACTACAAGGCGGCGACGGCCGGTAGCCCTTCGTTCAGGAGCAGGAGCTACCGCCGTCCGTACCCGGGCTTCATCGATGACTCCGCGTTCATGACGACGACCAGGCCTGGAGGTGAGGCCTACATGTACACGAGAGCGGCGCCGCCGCCGCCCGTCCGGGCCGCGTCGACGTCGATGGCGACATGGGACATGACCAGGAGCAAGAGCAACCGAGGGTGGCAGCAGGATGCCGGCAGGAGCCCCGGCGGCACGACGTGGATACAGAGCATCGAGGAGGAGGCCGGCGCCGACGACGTCACCGTCGTGGAGGATGCCGTGCCGAGGGAGTGGACGGCGCAGGTGGAGCCCGGCGTCCAGATCACCTTCGTCACGCTCCCCGGCGGTGGCAACGACCTCAAGCGCATCCGGTTCAGCCGAGAGATTTTTAACAAGTGGGAGGCGCAGCGTTGGTGGGGCGAGAACTACGACCGCATCGTCGAGCTGTACAACGTGCAGACGTTCAGCGGCCGGCAGCAAGGCGTGTCCACTCCCACGTCCTCCGTCGACGACTCTATTCTGAGAGAATCATCGTTCTGCTCCAGGGGCGGATCGACCCGGGAGAGTCCGGTCGTGACGCCGGCGACGTCGTCGTCGCTGGCCAAAGAGCCGATCGCAAGGAGCATGTCGTGCAAGGCGATGGCGGCTTCGGCGTCTAATTACGCCGCGGCGGCGGCTTCCACAAGAGCGGCGTGCTACCCATCGGCGGCAGTGCCCGACCCGTCCGACCACGTGTGGGCGCACCACTTCAACATGCTCAACTCCGCTGCGGCCGGCCCGTCCGCGGCGGGCGGCGGCGTCCCATCGTTGTACGACCCGTCGCGGGGGACCACCTCGTCCCGCGACGAGGCCTCCGTGTCCATCAGCAACGCGAGCGACATGGAGGCGACCGAGTGGATCGAGCAGGACGAGCCGGGCGTCTGCCTCACTATCCGCGAGCTCGGCGACGGCACCCGCGAGCTCCGCCGCATCCGGTTCAGCCGCGAGAGGTTTGGTGAGGACAGGGCGAAGGTTTGGTGGGAGCACAACAGAGACAGAATACAAGCACAGTATCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MLACIACSSKEGGEDGSRGAATPHGRDAVKSLTSQLKDMVLKFSGSNKHQHYKAATAGSPSFRSRSYRRPYPGFIDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSREIFNKWEAQRWWGENYDRIVELYNVQTFSGRQQGVSTPTSSVDDSILRESSFCSRGGSTRESPVVTPATSSSLAKEPIARSMSCKAMAASASNYAAAAASTRAACYPSAAVPDPSDHVWAHHFNMLNSAAAGPSAAGGGVPSLYDPSRGTTSSRDEASVSISNASDMEATEWIEQDEPGVCLTIRELGDGTRELRRIRFSRERFGEDRAKVWWEHNRDRIQAQYL</aaseq>

Gene Sequence

<dnaseqindica>1..105#3337..3794#3913..4057#4182..4639#4803..4881#ATGCTGGCATGCATCGCGTGCTCCTCCAAGGAAGGCGGGGAGGACGGGTCCCGTGGCGCGGCCACGCCTCACGGCAGAGATGCCGTCAAGTCCCTCACCTCACAGGTACCCGTCTGTCCCTTCTTCTTCTTCGTCTTGATCTAAACTTCTTCTCGTACATGCTACTCCTGGATCGAATTTACACCTGCTACTTTGCCATCAGTACTGCAATATATAGAGTGTACTACTACATGCTACTAGCTCTGTCTGTATGAGGAAGAGATAGTAGTAGCAGCAGTTAATAGACGAGGGGGAGACCAGGGGTGGCAGCCAAGATGGACGACCACTGAGACTGTACAGTAGTATACCACTAGTGCTCTGTCTCTGCTTACCCATGTCACAAAAAAGAGAGAGAGAGAGAGAGTACAGTACTCTACTTACCAGCAATGCCCAGGAATTGCCCAAGCATGGCCGATCTGGGACCGTATGCGCTGTGTTGCAACCTTGCAACTGAATTGAATTCGTTCGTCCGATTGGTTAGGTCACCCGCAGATCGATCAGCCGGTGTACGTTGGCAAAGAGTCCAAAGTCACGGTGGTTGAAAACTGACGAAGTAATGTGCGTGTGATAGAGACAAACTACTAGCAAAGCGTCCGTCGCCATTTCCTGGTACGGTGGCCGTGTACGTACTAGGTACTATTAAACGAGCAAGTTTCTGTAGCCATGACTGCCATTTATTTTGGCCCTTAGCCCCTTTACGGAATCATAGGATTACTAGTTCCGCCGCCCCACGCAATGCAGACACAGACGCAATCAATTGAGTACCTATACTCAGGTCATCTAACTCTCGATCGTCCTATGCAAACATACTCCAAAATGCTTTTAATTTCTAGCCGTACCTTCTCACAAGTTACAATGGATTGATATTGTTCATTTCTGCATATACAAGTATGCAACTTTATGACATTTTACGTTTTAAGAAAAGCCATTTTTAGTACTGATCATAGGCAATTAAACTAGTTTGGTATGTTGTCAGAGGTAGTACAAATCAACGAGCAGAGATCAGCATGATGTCCCTAGCTAAGACTATGTGTTTTCTCTGAAAAACCTATACCTACGTCGTCCAACTTTACAACAGTGATACAACTGCTGACTACAGTAGCTAGGAAATGTTGATGTTGAGCCATGCCCAAAAGTACGATGTGAATGACAGTGGTTCAATCGCCTCCCTTTAGCACTCAACGTCGATAAATTCTGGCGACATTCCTCGACAAAGCTGGTCAAGGGAGGATGAGTAGATGTGGTGGGAGAAAGAATTAAGGCCACTTTAATGTCTTTGCTGCTTGGATCCCCATCCCAGCCGGCCGGCCGGGCGCCACCACTCCTAAACTTTGGACAGTTTGCCACTTTGCCAACCACATCGTGGCTTGATTTTGTTCCCATGCTATGCACACACATTCCCCTTCTTTTCTCATTCGTTCATTCCCTTTAATTGCCCTAAAGAGATGCCCATAAGGTAGATACAAAGTGCCCCTGTGGCTGCCTGCCTGATGGTTGGCTGGTGTCCACCCTTTTTCCCTTGTAGAAAGGCATGCTTTGGTGGTGTTTCTAAGGGGGTGTTTGGTTGAATACATGTCTTGGGTTGGCACGTCTCAAGGCCTATTCAGATTGTAATCAAATAAATCTTACTACCTCTGTTTTTTAATAGATGACGCCGTTGATTTTTTCTCACATGTTTGACTATTCGTCTTATTCAAAAATTTTATGCAAATATATAAGATATAAATCAAATTTAAAGTAATATGAGTGATAAAACAACTCATAACAAAATAAATTATAATTACGTAATTTTTTTTGAATAAGACGAATGGTCAAACATGTAAGAAAAAGTTAATGGCGTCATCTATTAAAAAACGGAGGTAGTACTAAATTTTAGCATCGCTAAAATTTTAGCAAGTTGACAATATTGCCTTTGGCAAGATTTCTTATTTATTTATCAGAGTTTAGTAAGAAACTAAATGGATATATATATTTGACAGCTTTATAGAAAAAAGATACGATTTGAAATGGCATCAATATGAAACAAGCCCTTAAGCATGCCGTTGTTTCTTACAGAGAAGGAGCCAAGAATTTTAACCAATATAACTGTTCGATCTTCAAAATTCTCATGATATTTGAATGGATTTACAAAGGATTAATAAGGAGACAAAAACCAAAGGTTCAGGCCGTAATTGTCCTAGATTTATCTCCGCCCTAGTTTCTTAGGTGGTCTTTGGTTCGTTCGTTGTGTCAGATTATATTTCCAACCGCATAGTCCAACATCAAAATATTTGATTCCTTATCTACCTTGGTCATTGGTGTCGTCAGTATTCTGTTGACCATATGCCTTACCTAAGGTTAGGAATATGCCAAAGTTAGCCACGAACAAAACACAAAGTCTAAAACTAGGATCTGCCTTGCTTGCTGCAATGGAGATGGAATAAAGCCGGATACGAATCGGGCCACGGTGCATTGGCACGCGACGCGAGCTATACACTCACGGATTAATTAGGCCCAGCCTGGGCCCCTGCACCTGCCGGCCGCCGGCCGCGGGCCACGCAAACGCGCGCGCGGCTCGTCTCGCGTATGGCTCGCGTCTTGCATCTGCGGGCTCGCGTCTCGTGTCTTTTTAAGCGAGCGCGCACGGCGCACGCAACGCATCATGCGTGCATGCATGCCATCCATGCGGTGGAGGGGTCATGCTGCATGTGCTGCGATCGAGCGAGCCAGCGAGCGGCCGGGCCGCGCGCGCCTTTGCGCGCGACGAGCTGTCATTATCGCCCGCACCGGTTACTATGTTGCTTTGAGCTTAGGCTGCGATAGATATGCAGCCATGAGGCATGCATGCCACGGTTCCTTGATTCAGACAAAAGGGTAAAGATTTCCCTCCTGTGTCGTGTGCAGTGTCACTAGCCAGTTAGTGTGGTCATTAATTTGTACCAAGTATATTTGTGTGTTACTACTAGTTTTTTTTTTTTTGTGACCTAGCTAGCAGCCAGTGGCCACTTTTGATTTAAACCTGTTTGTCATATGAGGTCATCGGTCAGCAGGCATCATTCTCGGTACTCTTCCCTAATTTAAAGGTCACACATATGGATACACATGTTTATGGATGTTCATGATTAAAAAACTATTTACTTTTGATCCAAGCAAGCTAAGTATTGACACATGTAAATGTATCACAGATATTATACGATGTGATAGCTACTTATGCCAGTAATTCCAGTGAGAGCTGATGCACATAACACTCGCGAAGTGACTCTCGCGTGACTGAGTGGTAGCTAACTAGGCTCCTACGATGCAATGTGTTGTCTCCAGCTCAAGGACATGGTGCTCAAGTTCTCCGGCTCCAACAAGCATCAGCACTACAAGGCGGCGACGGCCGGTAGCCCTTCGTTCAGGAGCAGGAGCTACCGCCGTCCGTACCCGGGCTTCATCGATGACTCCGCGTTCATGACGACGACCAGGCCTGGAGGTGAGGCCTACATGTACACGAGAGCGGCGCCGCCGCCGCCCGTCCGGGCCGCGTCGACGTCGATGGCGACATGGGACATGACCAGGAGCAAGAGCAACCGAGGGTGGCAGCAGGATGCCGGCAGGAGCCCCGGCGGCACGACGTGGATACAGAGCATCGAGGAGGAGGCCGGCGCCGACGACGTCACCGTCGTGGAGGATGCCGTGCCGAGGGAGTGGACGGCGCAGGTGGAGCCCGGCGTCCAGATCACCTTCGTCACGCTCCCCGGCGGTGGCAACGACCTCAAGCGCATCCGGTTCAGGTTCTGACACTGATCATATCTGCTCCATTTCCACGGTTGATTGTATTCTCTGCACGTATTGTGTGCGAGCGATTTGTCCAGAGTTAACTCTCACGCACGTGCGTATTGGTGTGTGTAGCCGAGAGATTTTTAACAAGTGGGAGGCGCAGCGTTGGTGGGGCGAGAACTACGACCGCATCGTCGAGCTGTACAACGTGCAGACGTTCAGCGGCCGGCAGCAAGGCGTGTCCACTCCCACGTCCTCCGTCGACGACTCTATTCTGGTCGGTACTACGCCTTTCAAAGATTTCACGGGCATTCTATGCTACTTCGAAATCATCACGTTGTTTTCATCTGCATGATCAATAATGCAACTCACTGAAAAATCTGGACCGTGAATGAATGCAGAGAGAATCATCGTTCTGCTCCAGGGGCGGATCGACCCGGGAGAGTCCGGTCGTGACGCCGGCGACGTCGTCGTCGCTGGCCAAAGAGCCGATCGCAAGGAGCATGTCGTGCAAGGCGATGGCGGCTTCGGCGTCTAATTACGCCGCGGCGGCGGCTTCCACAAGAGCGGCGTGCTACCCATCGGCGGCAGTGCCCGACCCGTCCGACCACGTGTGGGCGCACCACTTCAACATGCTCAACTCCGCTGCGGCCGGCCCGTCCGCGGCGGGCGGCGGCGTCCCATCGTTGTACGACCCGTCGCGGGGGACCACCTCGTCCCGCGACGAGGCCTCCGTGTCCATCAGCAACGCGAGCGACATGGAGGCGACCGAGTGGATCGAGCAGGACGAGCCGGGCGTCTGCCTCACTATCCGCGAGCTCGGCGACGGCACCCGCGAGCTCCGCCGCATCCGGTTCAGGTATACACTAATCACGCACGGATAGCCAAAACATCTTAGGTTTACCATGTCACCAACACAAATCTTTCAAATCTAACCAGAATTTCATGTATATACTCGCCTAGGGACTACTTTCTGATTGATCCATGCTTAATCGTACTCAATTGATTCTCTGCTTCTGCAGCCGCGAGAGGTTTGGTGAGGACAGGGCGAAGGTTTGGTGGGAGCACAACAGAGACAGAATACAAGCACAGTATCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014419