BGIOSGA014422

From RiceWiki
Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014422| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014422, complete gene.| tag = AOX1(AO...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014422

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014422, complete gene.

LocusTag

AOX1(AO1-1)

Ensembl Transcript ID

BGIOSGA014422-TA

Ensembl Protein ID

BGIOSGA014422-PA

Length

2191

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29157194..29159384

Sequence Coding Region

29159064..29159384,29158776..29158904,29157354..29157842,29157194..29157253

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29157194..29159384 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29157194..29159384 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTCCCGGATGGCCGGATCGGCGATCCTCCGTCACGTCGGCGGCGTCCGCCTCTTCACCGCGTCGGCGACCTCTCCGGCGGCGGCGGCGGCGGCGGCGGCGAGGCCGTTCCTTGCAGGCGGAGAAGCCGTCCCCGGGGTGTGGGGGTTGCGGCTGATGTCCACGTCGTCCGTGGCGTCGACGGAGGCGGCGGCCAAGGCGGAGGCCAAGAAGGCGGACGCGGAGAAGGAGGTGGTGGTCAACAGCTACTGGGGCATCGAGCAGTCGAAGAAGCTGGTGCGGGAGGACGGCACGGAGTGGAAGTGGTCTTGCTTTAGGCCATGGGAGACCTACACCGCGGACACTTCGATCGATCTGACGAAGCACCACGTGCCCAAGACGCTGCTCGACAAGATCGCCTACTGGACCGTCAAGTCGCTGCGCTTCCCCACTGATATCTTCTTCCAGAGGAGGTATGGCTGCCGCGCGATGATGCTGGAGACGGTGGCGGCGGTGCCGGGGATGGTGGGCGGCATGCTGCTCCACCTCCGGTCCCTCCGGCGCTTCGAGCAGAGCGGCGGCTGGATCCGCACGCTGCTGGAAGAGGCCGAGAACGAGCGCATGCACCTGATGACCTTCATGGAGGTGGCGAACCCAAAGTGGTACGAGCGCGCCCTCGTCATCACCGTCCAGGGCGTCTTCTTCAACGCCTACTTCCTGGGTTACCTCCTCTCCCCCAAGTTCGCGCACCGCGTCGTCGGCTACCTCGAGGAGGAGGCCATCCACTCGTACACCGAGTTCCTCAAGGACCTCGAGGCCGGCAAGATCGACAACGTCCCTGCCCCGGCCATCGCCATCGACTACTGGCGCCTCCCCGCCAACGCCACGCTCAAGGACGTCGTCACCGTCGTGCGCGCCGACGAGGCTCACCACCGCGACGTCAATCACTTCGCATCGGACATCCATTACCAGGGCATGGAGCTGAAGCAGACCCCTGCGCCGATCGGATATCACTGA</cdnaseq>

Protein Sequence

<aaseq>MSSRMAGSAILRHVGGVRLFTASATSPAAAAAAAARPFLAGGEAVPGVWGLRLMSTSSVASTEAAAKAEAKKADAEKEVVVNSYWGIEQSKKLVREDGTEWKWSCFRPWETYTADTSIDLTKHHVPKTLLDKIAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRRFEQSGGWIRTLLEEAENERMHLMTFMEVANPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDLEAGKIDNVPAPAIAIDYWRLPANATLKDVVTVVRADEAHHRDVNHFASDIHYQGMELKQTPAPIGYH</aaseq>

Gene Sequence

<dnaseqindica>1..321#481..609#1543..2031#2132..2191#ATGAGCTCCCGGATGGCCGGATCGGCGATCCTCCGTCACGTCGGCGGCGTCCGCCTCTTCACCGCGTCGGCGACCTCTCCGGCGGCGGCGGCGGCGGCGGCGGCGAGGCCGTTCCTTGCAGGCGGAGAAGCCGTCCCCGGGGTGTGGGGGTTGCGGCTGATGTCCACGTCGTCCGTGGCGTCGACGGAGGCGGCGGCCAAGGCGGAGGCCAAGAAGGCGGACGCGGAGAAGGAGGTGGTGGTCAACAGCTACTGGGGCATCGAGCAGTCGAAGAAGCTGGTGCGGGAGGACGGCACGGAGTGGAAGTGGTCTTGCTTTAGGGTACTTGCGCTTCGCTTTGCTCCTGATCGGTTTCCTGTTTCGATTCTGTTTGTCCCGTAGATTGATCGCCAGATCGATGTATCCATACTCCGAGATAGTAGGCTCGGTCCTTAACTTGTCGCGCCGCCGTGTGTAATTTTGGTTTGATTTTCTCCGCAGCCATGGGAGACCTACACCGCGGACACTTCGATCGATCTGACGAAGCACCACGTGCCCAAGACGCTGCTCGACAAGATCGCCTACTGGACCGTCAAGTCGCTGCGCTTCCCCACTGATATCTTCTTCCAGGTATAATTGTGCTTACTCGATCACCATGCACCGCCCGACGGCCGTTTGATTCTCCGGGTGATTAGCGCTGTGTGTTTAGTTCAACGTTTTTTTCGAAGGGAAAAACTGAGAGGCCGCGTGACTCTTGGCGTGTCATAAGAGGCAAAGTAGCATTGCAACCAGGGCACTTGAGAATTTTGGTTTCCTTGCTTCCGGGAAGATGCCATTTGTATTTATGACGCCTGGGTTCTACCTGATCCACCTGTGTGATCGATTTTATTTTCGGAAAGTATTTTCTACACCTAGGTAACATGGCACCTATGTGTATGCATGCAATTTAAACCGTTATAAAAAATTTTACAAACATTATACAAACATGTAAGTCTAAATTCGATCAACATATGAAGAAACAAAAATAATAAATTTTATATGCGCTCTCCGGGTACTATTCACTGTCTGATTTTATTATTTTTGTTTCTCTAGTTATAGATCAAATTTAGTCATGCATGTTTGTGTATTGACTTATATCATCACAATCGATGTTACTAATTTTTTTTTTCAATTTTTTCTATAACTATTTGAGTCGCATGCAAATGATGGGTGTCATGGCACTTAGGTGTAGAAAATCCTTGTCCTTTTATTTTCCGCTATACTATCTGATAACATCGGCTAAGAAAAGGACACGCATTGTGAGAAGGACTCAACTTTGATTTGTTAATCTCTTGCCCATTAAATCAATCATAGGCTTATTACTGTTTGCACTACAATGACTGGTGATCCAATTGTTTCCTAGTGCAAATTAATCTATATATGATTCTAATGTCTTATGACTAATTTGGAAGAACAATTATATTACATGATATCCATTTCTAGTAGTATGTGGAAATGATCTCTAGTCGGTCGCTAATTGCTGTAACTGTCAATGGTTAACACTGCAAATTGGGTTGGGTGCAGAGGAGGTATGGCTGCCGCGCGATGATGCTGGAGACGGTGGCGGCGGTGCCGGGGATGGTGGGCGGCATGCTGCTCCACCTCCGGTCCCTCCGGCGCTTCGAGCAGAGCGGCGGCTGGATCCGCACGCTGCTGGAAGAGGCCGAGAACGAGCGCATGCACCTGATGACCTTCATGGAGGTGGCGAACCCAAAGTGGTACGAGCGCGCCCTCGTCATCACCGTCCAGGGCGTCTTCTTCAACGCCTACTTCCTGGGTTACCTCCTCTCCCCCAAGTTCGCGCACCGCGTCGTCGGCTACCTCGAGGAGGAGGCCATCCACTCGTACACCGAGTTCCTCAAGGACCTCGAGGCCGGCAAGATCGACAACGTCCCTGCCCCGGCCATCGCCATCGACTACTGGCGCCTCCCCGCCAACGCCACGCTCAAGGACGTCGTCACCGTCGTGCGCGCCGACGAGGCTCACCACCGCGACGTCAATCACTTCGCATCGGTACGCATGCATGATCAGCGATCTTGCTCTTTGATCTCGCCTTTTGGGGATGTATGTTGAATTGGTTCTGACGTGATCTGGTCTGGCTTGTGATGTGCAGGACATCCATTACCAGGGCATGGAGCTGAAGCAGACCCCTGCGCCGATCGGATATCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014422