BGIOSGA014456

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014456| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014456, complete gene.| tag = OsI_171...")
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Gene Name

BGIOSGA014456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014456, complete gene.

LocusTag

OsI_17181

Ensembl Transcript ID

BGIOSGA014456-TA

Ensembl Protein ID

BGIOSGA014456-PA

Length

3862

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28652924..28656785

Sequence Coding Region

28655651..28656785,28654693..28655132,28654193..28654509,28652924..28654112

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28652924..28656785 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28652924..28656785 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGAAGGTTCAACGTCGGAGAAACAGGCTGCGACGGGCAGCAAGGTGCCGGCGGCGGATCGGAGGAAGGAAAAGGAGGAAATCGAAGTTATGCTGGAGGGGCTTGACCTAAGGGCAGATGAGGAGGAGGATGTGGAATTGGAGGAAGATCTAGAGGAGCTTGAGGCAGATGCAAGATGGCTAGCCCTAGCCACAGTTCATACGAAGCGATCGTTTAGTCAAGGGGCTTTCTTTGGGAGTATGCGCTCAGCATGGAACTGCGCGAAAGAAGTAGATTTCAGAGCAATGAAAGACAATCTGTTCTCGATCCAATTCAATTGTTTGGGGGATTGGGAACGAGTTATGAATGAAGGTCCATGGACCTTTCGAGGATGTTCGGTGCTCCTCGCAGAATATGATGGCTGGTCCAAGATTGAATCTGTTAATCTCTATACCTACCCAGCATGGATCCAAATCCATGATCTGAAGGAGAAGATCAGGACGGGTAGCATTGCAACTCAGCTTCCGTGTAGAGCTGGGAGCATTGTTAAATTAGATGCAGCCTTGGTTCGGGGAAGCAGTGAGGGGGCCCGAGTGCGCGTGATGCTGGATGTTCGTAAGCCGCTCACGAGGGTGGTAAGTACCACTCTAAATAAAAAGAAGTGGATGTTCCGCGTTATGTATGAGAAAATGCCGATTTTTTGCGGTGTTTGTGGTTTTGTTGGGCATGTCACAAAGGAGCATGGTGATGGGGTTCACCCACCCGAAGCTATACAATACCCGAATAATCTGATAGCCCAAGATTTCAGAAGAGGCAGTTGGGGTTTTGGAGGAGGTCGAGGAAGAGGAAGTGGAAGAGGTCGGGGGAGGAATGATCGTAATAATAGGGTTGGTTCTGAGTCAGGCAATCCTGAGGAGATAGAGGATGAGGATATGATTGACACAGCGAGCAGTCCATCCAAAGCGATCGCAAAGTATATTGGTGGCTCTTCTTCTGCTAAAAGGAGGCTTGCAATTGGCGAGCTGCTGGGGCATGAAACAAAGACGGATCAACTGCTACAGATGGATAAGCCACATGGACGTGCAGAAGGAGACATTATTGGTGAAGAAGTGAGAAATGATGCAGATGAAACATGCAGCCTAGAAGAAGTCAATCGGCTTAGGCCTTTGTTGCAAGAGATTATATCGGAGACCCAGAGTGCCTTTGTGCCCGGGCGTATGATTGTAGACAATGCATTAGTAGCCTTTGAGTGCTTTCATTCCATACATAAGTGTACACGAGAAAGCCAAGACTTCTGTGCGTTAAAGCTGGATCTTTCAAAAGCTTACGACAGAGTCGACTGGGGATTCTTGGATGGAGCATTGCAAAAGTTGGGGTTTGGAAATATCTGGAGAAAGTGGATAATGTCATGTGTGACGTCTGTAAGGTATAGTGTTCGACTGAATGGGAATATGCTTGAACCGTTTTACCCAACAAGAGGTTTGCGGGAAGGAGACCCACTCAATCCATACCTATTTATTTTTATTGCTGACGGCCTATCAAATATTCTGCAAAGAAGGAGGGATGAAAGACAGATTCAGCCTCTAAAGGAGAGACAAGATGGAATCAAAGCTGTATTGCAAGTTGAAAGAACATGCTTTGATGATAAGTGTCTGGGACTCCCAACCCCAGATGGAAGAATGAAGGCTGAGCAATTCCAACCAATTAAAGAGAGGTTTGAGAAGAGGCTTACAGATTGGAGTGAGAGATTCCTTTCTTTAGCTGGGAAGGAAGCTTTGATTAAAAGTGTTGCTCAAGCCTTGCCGACTTATACATGGGAGTGTTCAAGATGCCAGAGCGGTTTTGCGAAGAATATGAACAACTCGTCCGGAATTTCTGGTGGGGGCATGAAAAAGGGGAGAAGAAGTCAGGCTCTCCTTGCTCGGCAAGCGTGGAGATTAATCGAATCGCCTGATAGCTTATGCGCACGAGTTCTGAAGGCAAAGTACTATCCAAATGGGACAATAACTGATACAGCGTTCCCATCAGTTTCATCGCCGACATGGAAAGGAATTGTGCATGGGCTAGAGTTGCTAAAGAAGGGGCTGATATGGAGGATAGGAGATGGAAGGAAGACAAAGATATGGAGGAACCACTGGGTTGCACATGGGGAAAATCTAAAGATTTTGGAGAAGAAAACCTGGAATAGGCTTATATATGTCCGGGAGTTAATCGTCACCGACACTAAAACATGGAATGAGCCCTTAATCAGACACATTATAAGAGAGGAGGATGCGGACGAAATTCTGAAAATTCGAATACCACAACGGGAGGAAGAGGATTTCCCAGCGTGGCATTATGAGAAAACTGGCATATTTTCAGTAAGAAGTGCTTATAGATTGGCTTGGAACCTTGCTAGGAAAACATCAGAGCAAGCTTCTTCAAGCTCGGGGGGAGCAGATGGAAGAAAAATCTGGGATAATGTGTGGAAAGCGAATGTTCAGCCAAAAGTGAGGGTTTTTGCCTGGAAATTAGCTCAGGACAGATTGGCCACTTGGGAAAATAAAAGAAAGAGGAAGATTGAGATGTTTGGAACCTGCCCAATTTGCGGACAGAAGGAGGAGACGGGGTTCCATGCAACAGTGGAGTGTACGCTGGCCAAAGCGTTGCGAGCTTCATTGAGAGAACATTGGACACTGCCAGATGAAAGCATGTTTTCAATGACAGGACCAGATTGGCTTCTAGTTCTGCTAGACAGACTAAGCAGTGAAAAGAAGGCCCAGGTTTTATACTTGTTGTGGAGAGCCTGGTATATTAGGAATGAGGTGGTTCATGGTAAAGGTAATGTCCCTATTACAGATTCGGTGCATTTTTTGATTAATTATGATAACCTACAGTTGCCCCCCCCCCCCCGAAAACACATGGAAGACATCAAGGGGAAAGGACCTATGTTTCAGGATCCAGGTCAGAAAGAGCAGACATGTCAGTTGAATGCAGAGAAAGAAAAGTGGAGTTGCCCGCCTGATGGAAGTGCAAAGCTCAATGTGGACGCAGCTTATAGAACTGAAACAGGCGAAGCAAGCGCTGGGATTATCATCAGAGACTGCAGGGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MASEGSTSEKQAATGSKVPAADRRKEKEEIEVMLEGLDLRADEEEDVELEEDLEELEADARWLALATVHTKRSFSQGAFFGSMRSAWNCAKEVDFRAMKDNLFSIQFNCLGDWERVMNEGPWTFRGCSVLLAEYDGWSKIESVNLYTYPAWIQIHDLKEKIRTGSIATQLPCRAGSIVKLDAALVRGSSEGARVRVMLDVRKPLTRVVSTTLNKKKWMFRVMYEKMPIFCGVCGFVGHVTKEHGDGVHPPEAIQYPNNLIAQDFRRGSWGFGGGRGRGSGRGRGRNDRNNRVGSESGNPEEIEDEDMIDTASSPSKAIAKYIGGSSSAKRRLAIGELLGHETKTDQLLQMDKPHGRAEGDIIGEEVRNDADETCSLEEVNRLRPLLQEIISETQSAFVPGRMIVDNALVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCVTSVRYSVRLNGNMLEPFYPTRGLREGDPLNPYLFIFIADGLSNILQRRRDERQIQPLKERQDGIKAVLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLTDWSERFLSLAGKEALIKSVAQALPTYTWECSRCQSGFAKNMNNSSGISGGGMKKGRRSQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDGRKTKIWRNHWVAHGENLKILEKKTWNRLIYVRELIVTDTKTWNEPLIRHIIREEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSAYRLAWNLARKTSEQASSSSGGADGRKIWDNVWKANVQPKVRVFAWKLAQDRLATWENKRKRKIEMFGTCPICGQKEETGFHATVECTLAKALRASLREHWTLPDESMFSMTGPDWLLVLLDRLSSEKKAQVLYLLWRAWYIRNEVVHGKGNVPITDSVHFLINYDNLQLPPPPRKHMEDIKGKGPMFQDPGQKEQTCQLNAEKEKWSCPPDGSAKLNVDAAYRTETGEASAGIIIRDCRG</aaseq>

Gene Sequence

<dnaseqindica>1..1135#1654..2093#2277..2593#2674..3862#ATGGCGAGCGAAGGTTCAACGTCGGAGAAACAGGCTGCGACGGGCAGCAAGGTGCCGGCGGCGGATCGGAGGAAGGAAAAGGAGGAAATCGAAGTTATGCTGGAGGGGCTTGACCTAAGGGCAGATGAGGAGGAGGATGTGGAATTGGAGGAAGATCTAGAGGAGCTTGAGGCAGATGCAAGATGGCTAGCCCTAGCCACAGTTCATACGAAGCGATCGTTTAGTCAAGGGGCTTTCTTTGGGAGTATGCGCTCAGCATGGAACTGCGCGAAAGAAGTAGATTTCAGAGCAATGAAAGACAATCTGTTCTCGATCCAATTCAATTGTTTGGGGGATTGGGAACGAGTTATGAATGAAGGTCCATGGACCTTTCGAGGATGTTCGGTGCTCCTCGCAGAATATGATGGCTGGTCCAAGATTGAATCTGTTAATCTCTATACCTACCCAGCATGGATCCAAATCCATGATCTGAAGGAGAAGATCAGGACGGGTAGCATTGCAACTCAGCTTCCGTGTAGAGCTGGGAGCATTGTTAAATTAGATGCAGCCTTGGTTCGGGGAAGCAGTGAGGGGGCCCGAGTGCGCGTGATGCTGGATGTTCGTAAGCCGCTCACGAGGGTGGTAAGTACCACTCTAAATAAAAAGAAGTGGATGTTCCGCGTTATGTATGAGAAAATGCCGATTTTTTGCGGTGTTTGTGGTTTTGTTGGGCATGTCACAAAGGAGCATGGTGATGGGGTTCACCCACCCGAAGCTATACAATACCCGAATAATCTGATAGCCCAAGATTTCAGAAGAGGCAGTTGGGGTTTTGGAGGAGGTCGAGGAAGAGGAAGTGGAAGAGGTCGGGGGAGGAATGATCGTAATAATAGGGTTGGTTCTGAGTCAGGCAATCCTGAGGAGATAGAGGATGAGGATATGATTGACACAGCGAGCAGTCCATCCAAAGCGATCGCAAAGTATATTGGTGGCTCTTCTTCTGCTAAAAGGAGGCTTGCAATTGGCGAGCTGCTGGGGCATGAAACAAAGACGGATCAACTGCTACAGATGGATAAGCCACATGGACGTGCAGAAGGAGACATTATTGGTGAAGAAGTGAGAAATGATGCAGATGAAACATGCAGCCTAGAAGAAGGTAAATCGTCCTCAAGAGACAGCAAACGACAGAAGAAGAAAGGGGAAGACTGTCACGCCCCGAATTAGTCCCGACCGGAACTAACCCGGAACGCTCCAAATTAACCTGTTAATCGATACCAGTCCCAGGAAACAGTGCTGGTATCACAGGGAGACAGATTATCATAGCAACAGAAGTCTCTTTATTATAGAGTAGAAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGAAAGCGGAAGCCAGGACTTGGACCAAACAATCACAGGCGCGACTTGGGAACTAGGCTGAAACCCTAAAACTCATCGTAGCCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATGGAATGAAGGAGTGAATGATACTGTTATTGTCATGATTCCAAAAATGAATGCACCGGTGGAGATGAAGGATTTCAGACCAATCAGCCTTTGTAATGTGATTTACAAAGTGGTGGTTAAATGCTTAGTCAATCGGCTTAGGCCTTTGTTGCAAGAGATTATATCGGAGACCCAGAGTGCCTTTGTGCCCGGGCGTATGATTGTAGACAATGCATTAGTAGCCTTTGAGTGCTTTCATTCCATACATAAGTGTACACGAGAAAGCCAAGACTTCTGTGCGTTAAAGCTGGATCTTTCAAAAGCTTACGACAGAGTCGACTGGGGATTCTTGGATGGAGCATTGCAAAAGTTGGGGTTTGGAAATATCTGGAGAAAGTGGATAATGTCATGTGTGACGTCTGTAAGGTATAGTGTTCGACTGAATGGGAATATGCTTGAACCGTTTTACCCAACAAGAGGTTTGCGGGAAGGAGACCCACTCAATCCATACCTATTTATTTTTATTGCTGACGGCCTATCAAATATTCTGCAAAGAAGGAGGGATGAAAGACAGATTCAGCCTCTAAAGGTCTGTCGCTCTGCTTCTGGTGTGTCGCACCTGTTATTTGCGGATGACAGTTTGTTATTTTTTAAGGCTGAAGTGATCCAAGCGACGAGAATTAAAGAGGCACTGGATTTATATGAGCGGTGTACATGGCAACTCATTAATCCAAACAAATGTTCGTTATTGTTTAGTGCTCTCTGCCCGCAGGAGAGACAAGATGGAATCAAAGCTGTATTGCAAGTTGAAAGAACATGCTTTGATGATAAGTGTCTGGGACTCCCAACCCCAGATGGAAGAATGAAGGCTGAGCAATTCCAACCAATTAAAGAGAGGTTTGAGAAGAGGCTTACAGATTGGAGTGAGAGATTCCTTTCTTTAGCTGGGAAGGAAGCTTTGATTAAAAGTGTTGCTCAAGCCTTGCCGACTTATACATGGGAGTGTTCAAGATGCCAGAGCGGTTTTGCGAAGAATATGAACAACTCGTCCGGAATTTCTGGTGGGGGCATGAAAAAGGGGAGAAGAAGGTTCATTGGATTGCCTGGGAGAAACTTACAAGCCCAAAACTTTTGGGTGGACTGGGCTTTCGGGATATCCGATGTTGTAGTCAGGCTCTCCTTGCTCGGCAAGCGTGGAGATTAATCGAATCGCCTGATAGCTTATGCGCACGAGTTCTGAAGGCAAAGTACTATCCAAATGGGACAATAACTGATACAGCGTTCCCATCAGTTTCATCGCCGACATGGAAAGGAATTGTGCATGGGCTAGAGTTGCTAAAGAAGGGGCTGATATGGAGGATAGGAGATGGAAGGAAGACAAAGATATGGAGGAACCACTGGGTTGCACATGGGGAAAATCTAAAGATTTTGGAGAAGAAAACCTGGAATAGGCTTATATATGTCCGGGAGTTAATCGTCACCGACACTAAAACATGGAATGAGCCCTTAATCAGACACATTATAAGAGAGGAGGATGCGGACGAAATTCTGAAAATTCGAATACCACAACGGGAGGAAGAGGATTTCCCAGCGTGGCATTATGAGAAAACTGGCATATTTTCAGTAAGAAGTGCTTATAGATTGGCTTGGAACCTTGCTAGGAAAACATCAGAGCAAGCTTCTTCAAGCTCGGGGGGAGCAGATGGAAGAAAAATCTGGGATAATGTGTGGAAAGCGAATGTTCAGCCAAAAGTGAGGGTTTTTGCCTGGAAATTAGCTCAGGACAGATTGGCCACTTGGGAAAATAAAAGAAAGAGGAAGATTGAGATGTTTGGAACCTGCCCAATTTGCGGACAGAAGGAGGAGACGGGGTTCCATGCAACAGTGGAGTGTACGCTGGCCAAAGCGTTGCGAGCTTCATTGAGAGAACATTGGACACTGCCAGATGAAAGCATGTTTTCAATGACAGGACCAGATTGGCTTCTAGTTCTGCTAGACAGACTAAGCAGTGAAAAGAAGGCCCAGGTTTTATACTTGTTGTGGAGAGCCTGGTATATTAGGAATGAGGTGGTTCATGGTAAAGGTAATGTCCCTATTACAGATTCGGTGCATTTTTTGATTAATTATGATAACCTACAGTTGCCCCCCCCCCCCCGAAAACACATGGAAGACATCAAGGGGAAAGGACCTATGTTTCAGGATCCAGGTCAGAAAGAGCAGACATGTCAGTTGAATGCAGAGAAAGAAAAGTGGAGTTGCCCGCCTGATGGAAGTGCAAAGCTCAATGTGGACGCAGCTTATAGAACTGAAACAGGCGAAGCAAGCGCTGGGATTATCATCAGAGACTGCAGGGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014456