BGIOSGA014462

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014462, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014462, complete gene.

LocusTag

OSJNBA0086O06.4

Ensembl Transcript ID

BGIOSGA014462-TA

Ensembl Protein ID

BGIOSGA014462-PA

Length

4166

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28554945..28559110

Sequence Coding Region

28558267..28559110,28558103..28558169,28557241..28557602,28556854..28557168,28555495..28556575
,28555409..28555433,28554945..28555076

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28554945..28559110 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28554945..28559110 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGTTCGTGATGGGCGACCACGCGCGGCTCTTGTCCTTCCTGCGGCTCGCCACGGAGCTCGCCGTGACGTCGCCGCTCTTCGCGAATCTCTCCGCGTGCCTCTCCTCCGACGCCGCGTGCCTCGACGGCTTGGCGCGCGTCCGCGGCCGCGGCCGCGGACGCGAGCGGCTCCGCGTCGTGGCGTACAGGCTCGGCGGCATGCGGTACAGCTGGGCGCCGCGGTTCCGCCTCGCCGTGCTGCTCCTCCTGCGGGACAAGTTCCCCGAGCTGGTCGGCGCCGTCGAGGTGGTGGATCCCACCGTGGCCCCGGTGGAGCGCCGGGCCATGGAGGAGCTGGGCTGCGTTGTCACCGCGTCGCCTGCGCTCTGCCTTGTGGTCGAACAGCCAACTCTGATCTTCATGCCCTACGCGGATCGCGTCTTCTTTGAGAATTTGCTCACCTTGAACTGGACCCCAGATCAGCTCGGCAAGATCGTCGTTCTCGGGCACAGTTTCAGTGCCATGGTGAAGATGCTTGAGCTCAGCATTTCGAAGCAAGAGAAGTGTGGTGTCACTGAGCAGAGGGAGAAGGTGAGGAGGGTACTGGCAATTCAGAGCTATGTTCAGGAATTAGAGCTTTGTGCTGAGATATCTGGTTTGTTCGATAACCCTCTCTTGGGAGATGAGTATCCTGATGAATTGAACCGGTCTGTCTACAATCATTCATCAGAGAAGTGTATATGCATGCACTGCATTGCGCATATTGAGAGGGCTGCCATGATTTATGCTCTTCCCAGCATCTTTTCAGTTCATTTCTTTCAGTTTGATCCTGAAGTTGATATTGAACACTTGATACCAGATAATTGTGCTACAAAGGTCTGGAGTTATGTCAATGTCCAAATGAATTGTGATGCTCAGTTAGAAGGGTGGCATTTAAATCCTAGTGATGCATACATTGAGGACAAGCACTTACAGGAAGCTAAAAGCATAGTTAAAGAAATGCATGAAACTATTTCTGATGTTAGGAGTTCTGCACTGTACACAAAGTTTATTGATCATGTGAAGAAAGATGAGAGCGTTTCTTCTCACATTTCAAGCATGTTGGGAGCTCATGAATGCATCCAATTGGTTATTTATGGCCTTGGGAGCTTTGAATTTGATGTGAAGTCTCAATATCAGCTTGCCTTCGCTCTTCTTCTAAAGGCAGATAATATATTCCCAATTGGTGACATTGAAATATATGATCCAGCACTCTCTCCTGCTGATGTCAAAGCATGCTTCGACTTGGGATTGAAATTCGTTGGAAATCTCATTGAGTCAAATTTCACTGCTAAGCAATTAAATAAGATCATTCTAGTTTCCTATGGGTTCAAGAATAGTGGGAAAAGTATTTCTGCTGCACTTGAAAACAGGAGCTGTGGATTTACTGGTATCAAGGGTTCCTTAGCTTTGGAAAGAGACAGGTTTCTTTGGGCAAGTATTAATTATATTGATGAAGTAATTGTTTTGGAAAACTTTGATGAGGAATTCTGGGGAGTCTCTGAACTGAGGGTTGAGTTTCTTGATGTTGCCGCTGATGTGGACATGAACTCAAATGTGCCAATCGTGTCTTATTTCCATATGCACCTGAAAGAAAGAATGTTGCGTCCATTTAAACAAGATCAAGGCGACTGCAAGGATGATGAACCTCAATTCTGGGGACAGGAGTTCCAGCACCGAATCCCAGCAATCCATCGGAATACTTGGTCCCCTCCACCCAAGGGTTGGATCAAGCTCAACTTCCATGGCACTGGCTGCTCCAAAAATCGTTCTGCTGGCATGGGTGGTGTATTCCACAATGATGAAGGTGCACTCTCCTACTTCATCGGTTCCTTAGGTAACGTGGATCAGACTGTGGCTAGTATTCAAGCACTTGAACATGGGCTAGAAATCATGCTTGAGCATCATGAACCAGTTAAAAAGCTGATCGTTGAGGGGGACGATCTCACGGTGATACGTTGGTGCAACAAAATCTCTTGCCCACCTGCAAGAGCTCATGATTCATTCTTACATAGCTACTGGTACATGGATTTGATGCCGTGTGAGGGGGCTGGTGTGCTTGCTGGGTCATCCAAAGAGACTAACAATGAGAGTGATAGTTCTTCACAAGACGCATCACCTGTTAAGCCACTCAGTGACTGTAGCAGTGAGAATGATAAAGATGAGTATGACGGTTCTTTGCAGGATGCATCACCTAGTGAACCACCGAATGACAGTAACTGCGAGAGTGGTAAATATGAGAACAGTGACTCTCTACAAGATGCTTCACCCGCTGAGCTATCTGAAGTCTGTTACAATGGAAATGGTTCTTTACAGGATGCTTCGCCTGCTGAGCTATCTGAAGTCAGTAACAATGGAAATGGTTCTTTACAAGATGCTTCGTCTTCTGAGCTATCTGAAGTCTGTAACAATGGAAATGGTCAGGATGAGGACGGATGTTCATCTTCTGAGTTTGTGATCCCTCCTGGATGGGCTCAAAGGGAGTACATAGCTTGGCGGGTCGAAGAGGAGGCAAATCAGACCGCAATTGGTTTGGCGCGTCTAGGCACTGCGCTACCTGACCATGGGATAATGGTACACCTCTCAACCAAGTGTGACTGTGAACATGGAAGAGAAATGAAGAAAGGCAGACCAGACATCACATGTATTAACGATCACCATATGTTACAGATGAACAGTGGGTTTAAACTTTTTACTCCTTTGCTAGTAGAAAGTGGCTTTGATTCTGCGCGGACTAGCTGCAGCCTGCAGGTTATAACCCTGACGTCACGCTATGTTGAGCTCCCAATGGGCCTAACATAA</cdnaseq>

Protein Sequence

<aaseq>MEEFVMGDHARLLSFLRLATELAVTSPLFANLSACLSSDAACLDGLARVRGRGRGRERLRVVAYRLGGMRYSWAPRFRLAVLLLLRDKFPELVGAVEVVDPTVAPVERRAMEELGCVVTASPALCLVVEQPTLIFMPYADRVFFENLLTLNWTPDQLGKIVVLGHSFSAMVKMLELSISKQEKCGVTEQREKVRRVLAIQSYVQELELCAEISGLFDNPLLGDEYPDELNRSVYNHSSEKCICMHCIAHIERAAMIYALPSIFSVHFFQFDPEVDIEHLIPDNCATKVWSYVNVQMNCDAQLEGWHLNPSDAYIEDKHLQEAKSIVKEMHETISDVRSSALYTKFIDHVKKDESVSSHISSMLGAHECIQLVIYGLGSFEFDVKSQYQLAFALLLKADNIFPIGDIEIYDPALSPADVKACFDLGLKFVGNLIESNFTAKQLNKIILVSYGFKNSGKSISAALENRSCGFTGIKGSLALERDRFLWASINYIDEVIVLENFDEEFWGVSELRVEFLDVAADVDMNSNVPIVSYFHMHLKERMLRPFKQDQGDCKDDEPQFWGQEFQHRIPAIHRNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIGSLGNVDQTVASIQALEHGLEIMLEHHEPVKKLIVEGDDLTVIRWCNKISCPPARAHDSFLHSYWYMDLMPCEGAGVLAGSSKETNNESDSSSQDASPVKPLSDCSSENDKDEYDGSLQDASPSEPPNDSNCESGKYENSDSLQDASPAELSEVCYNGNGSLQDASPAELSEVSNNGNGSLQDASSSELSEVCNNGNGQDEDGCSSSEFVIPPGWAQREYIAWRVEEEANQTAIGLARLGTALPDHGIMVHLSTKCDCEHGREMKKGRPDITCINDHHMLQMNSGFKLFTPLLVESGFDSARTSCSLQVITLTSRYVELPMGLT</aaseq>

Gene Sequence

<dnaseqindica>1..844#942..1008#1509..1870#1943..2257#2536..3616#3678..3702#4035..4166#ATGGAGGAGTTCGTGATGGGCGACCACGCGCGGCTCTTGTCCTTCCTGCGGCTCGCCACGGAGCTCGCCGTGACGTCGCCGCTCTTCGCGAATCTCTCCGCGTGCCTCTCCTCCGACGCCGCGTGCCTCGACGGCTTGGCGCGCGTCCGCGGCCGCGGCCGCGGACGCGAGCGGCTCCGCGTCGTGGCGTACAGGCTCGGCGGCATGCGGTACAGCTGGGCGCCGCGGTTCCGCCTCGCCGTGCTGCTCCTCCTGCGGGACAAGTTCCCCGAGCTGGTCGGCGCCGTCGAGGTGGTGGATCCCACCGTGGCCCCGGTGGAGCGCCGGGCCATGGAGGAGCTGGGCTGCGTTGTCACCGCGTCGCCTGCGCTCTGCCTTGTGGTCGAACAGCCAACTCTGATCTTCATGCCCTACGCGGATCGCGTCTTCTTTGAGAATTTGCTCACCTTGAACTGGACCCCAGATCAGCTCGGCAAGATCGTCGTTCTCGGGCACAGTTTCAGTGCCATGGTGAAGATGCTTGAGCTCAGCATTTCGAAGCAAGAGAAGTGTGGTGTCACTGAGCAGAGGGAGAAGGTGAGGAGGGTACTGGCAATTCAGAGCTATGTTCAGGAATTAGAGCTTTGTGCTGAGATATCTGGTTTGTTCGATAACCCTCTCTTGGGAGATGAGTATCCTGATGAATTGAACCGGTCTGTCTACAATCATTCATCAGAGAAGTGTATATGCATGCACTGCATTGCGCATATTGAGAGGGCTGCCATGATTTATGCTCTTCCCAGCATCTTTTCAGTTCATTTCTTTCAGTTTGATCCTGAAGTTGATATTGAACACTTGATACCAGGTTCTTTTGCAGCCCATTTCCCTTTTTGTAAAAGCTTAACGTGGTGCCTACATGGACTATGTTGTCTGATGACTTGTTGCTGCTTTGTTTGATGCAGATAATTGTGCTACAAAGGTCTGGAGTTATGTCAATGTCCAAATGAATTGTGATGCTCAGTTAGAAGGGTAAGACTGCATACTGACAAAACAATTAATTTGGACCAGTTTCCCATGATTATTTGCTTGCTGAATTCTGTGAATTTTAAGTAAACAAAATGATGCTTTGGTTTAAAGAAATATTTAATGAAGGATAACTCAAGCAAAGATGATTACACCATTTTAGGCAGCTTTCTTGCGTGTACCCTAAAAAAAGGGTTTCTTATGTAAAATGGGCTATTTTACCGTTTAAGTGAGATTTGCATTAATTATAGTATTGCTACAATGCATGTTCTTCTTTTACTTCAGTGATTAACTCAAGTTTGTCCTGAACAGAGAAATAAAAATGACTTGGCAGATTGCTGCAGCCTGCAGCACCTGTTTGTTGTTTTATCAATCATCGACTATGTTTCTAGGCCATCTGTTTTATGATTTTTCACGTGCGCTAATAATTTTGTGGGATGTATTTTGTCGTTCGCTATTGTTGACTTCACAAATTAATTCCTTTTCTAAATGAATTAATCGACCAGGTGGCATTTAAATCCTAGTGATGCATACATTGAGGACAAGCACTTACAGGAAGCTAAAAGCATAGTTAAAGAAATGCATGAAACTATTTCTGATGTTAGGAGTTCTGCACTGTACACAAAGTTTATTGATCATGTGAAGAAAGATGAGAGCGTTTCTTCTCACATTTCAAGCATGTTGGGAGCTCATGAATGCATCCAATTGGTTATTTATGGCCTTGGGAGCTTTGAATTTGATGTGAAGTCTCAATATCAGCTTGCCTTCGCTCTTCTTCTAAAGGCAGATAATATATTCCCAATTGGTGACATTGAAATATATGATCCAGCACTCTCTCCTGCTGATGTCAAAGCATGCTTCGACTTGGGTCTATGAGTGCTTTTGGTGAATGAGCAATGCCAAAGAAGTGTTGACAAGCCTACACTTTTCTTTGTTCCAGGATTGAAATTCGTTGGAAATCTCATTGAGTCAAATTTCACTGCTAAGCAATTAAATAAGATCATTCTAGTTTCCTATGGGTTCAAGAATAGTGGGAAAAGTATTTCTGCTGCACTTGAAAACAGGAGCTGTGGATTTACTGGTATCAAGGGTTCCTTAGCTTTGGAAAGAGACAGGTTTCTTTGGGCAAGTATTAATTATATTGATGAAGTAATTGTTTTGGAAAACTTTGATGAGGAATTCTGGGGAGTCTCTGAACTGAGGGTTGAGTTTCTTGATGTTGCCGCTGATGTGGACATGAACTCAAATGTGCCAAGTATGTGTGTTTTTCTTCTGAACTCATTTTTTTTTTCGGTACTCTTGTTTGATGGTGGAGCTAACTTTGCAGGGTTGTCTCTTAAGGAAAAGTTTTTCCTTAACTTTGAATTGGAACTGGAATATAATTCCTTCTTTGCTTTTGAGTAAGACCTCTTGAGACTTAAGGGCAATATCTTGCTACTTAACATTCTTCATTTGATTAGTGTTTGTACATGCTGAATCAAAATTTAGGTCAATAAGACTAATTATGTAATGTTCTTGTGTTTGTGTTTTCAGTCGTGTCTTATTTCCATATGCACCTGAAAGAAAGAATGTTGCGTCCATTTAAACAAGATCAAGGCGACTGCAAGGATGATGAACCTCAATTCTGGGGACAGGAGTTCCAGCACCGAATCCCAGCAATCCATCGGAATACTTGGTCCCCTCCACCCAAGGGTTGGATCAAGCTCAACTTCCATGGCACTGGCTGCTCCAAAAATCGTTCTGCTGGCATGGGTGGTGTATTCCACAATGATGAAGGTGCACTCTCCTACTTCATCGGTTCCTTAGGTAACGTGGATCAGACTGTGGCTAGTATTCAAGCACTTGAACATGGGCTAGAAATCATGCTTGAGCATCATGAACCAGTTAAAAAGCTGATCGTTGAGGGGGACGATCTCACGGTGATACGTTGGTGCAACAAAATCTCTTGCCCACCTGCAAGAGCTCATGATTCATTCTTACATAGCTACTGGTACATGGATTTGATGCCGTGTGAGGGGGCTGGTGTGCTTGCTGGGTCATCCAAAGAGACTAACAATGAGAGTGATAGTTCTTCACAAGACGCATCACCTGTTAAGCCACTCAGTGACTGTAGCAGTGAGAATGATAAAGATGAGTATGACGGTTCTTTGCAGGATGCATCACCTAGTGAACCACCGAATGACAGTAACTGCGAGAGTGGTAAATATGAGAACAGTGACTCTCTACAAGATGCTTCACCCGCTGAGCTATCTGAAGTCTGTTACAATGGAAATGGTTCTTTACAGGATGCTTCGCCTGCTGAGCTATCTGAAGTCAGTAACAATGGAAATGGTTCTTTACAAGATGCTTCGTCTTCTGAGCTATCTGAAGTCTGTAACAATGGAAATGGTCAGGATGAGGACGGATGTTCATCTTCTGAGTTTGTGATCCCTCCTGGATGGGCTCAAAGGGAGTACATAGCTTGGCGGGTCGAAGAGGAGGCAAATCAGACCGCAATTGGTTTGGCGCGTCTAGGCACTGCGCTACCTGACCATGGGATAATGGTACACCTCTCAACCAAGTGTGACTGTGAACATGGAAGAGAAATGAAGAAAGGCAGACCAGACATCACATGGTGAGAAGCTCTTCATATAGTTGATTCATTCTGTAGCCACAATTGCTTTTCTTTTCTGCAGTATTAACGATCACCATATGTTACAGGTTTGATCATTAGAGAGGGCCGTTGTTTGAGGAGCAAAGCTTGGGCTAACAGAGAGTGGAGAGCCTTTCTCATGTGGAACCAGTCGCTGATGCAAGAAGTGGTGGCGCAATCCTTTTGTAATATTTTGCAGATTATAGTATGTCTATGTTAGCATGTTACCTGCCATGGATTCATAACGATGAGAAAGAACCAATGATGCTAATACAACAGATCCAGGATTGACATCTGTTTTTTTTTTAGTCACCTGTGCGTGAGTATCTCCTTGTGTATTTGCAGCTTGTGTGACTTGTTAATATAAACATGCTACAACATCTTGGTTTTTTTATTTCAGATGAACAGTGGGTTTAAACTTTTTACTCCTTTGCTAGTAGAAAGTGGCTTTGATTCTGCGCGGACTAGCTGCAGCCTGCAGGTTATAACCCTGACGTCACGCTATGTTGAGCTCCCAATGGGCCTAACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014462