BGIOSGA014474

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014474, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA014474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014474, complete gene.

LocusTag

OS04G0585300

Ensembl Transcript ID

BGIOSGA014474-TA

Ensembl Protein ID

BGIOSGA014474-PA

Length

5666

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28383575..28389240

Sequence Coding Region

28388860..28389240,28388675..28388767,28388449..28388522,28388225..28388283,28388109..28388157
,28387488..28387582,28386649..28386683,28386479..28386580,28386002..28386060
,28385747..28385921,28384783..28384956,28384484..28384595,28384308..28384365
,28384109..28384214,28383575..28383775

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28383575..28389240 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28383575..28389240 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGATCGTCGTCGGCGACGGCGGCGGGAAGTAAGAAGCGGAGGTCCAAAACCGGAGCTCTAACCCTAGGGGAGGTGAAGACGCTTGGCGAGGAGCTCCTCTCGTCGCGCGCCAACCTCAACCACGCCCCCACCCTCCTCGCGCTCCTCTCCCCCTCCGCGCCGCTGGACCTCGCGCTGGAGGCGCTCATCTCGCTCCAGTCGTTCTTCGTGCCCCTCCTCCCTTCCATCCCCTCCGCCGCCGCCACGGCCGCCGCGGCCGCGGGGGATGCAGACCCCGAGCTCGTGTTTAGGTCCTGGTTGCGGAAGCGTTTCGACGAGCTCGTTGCGGCGCTCGTCGAGCTCACCGTGTCTCCGCACAGTGATGATGCAATCAGGGATCTGGCACTTGATGCGCTCATGGATTTCGTGAAGCTGGGCAAGGATGGGAGATTCCAGTCGGCAATTTACCACAAGTTTATCCACAATTTGATTCATGCTACCGACTCAATTGATCCTTTGCTAGAGTTGCTTGGACCAAAGTACTTCATATACACTGATGTTTGTTACTTCACTTACACTAGCTTAGACAAGATCGCCAGCAGTATAGGCAATAAAGCCACCGGTTCTGAAAAGAGTGGCTTGCATAGTGGCGATGATGGGCCAGAAGACAGAGGCACTATTTATGTACGCAATATATACAATACTTTGGCGCATATTCCTGCCTTGGATTTTCAGGAGTCAAAGTTTAATATGTGGAGTACTGTTGGCCTTTCTTCCAAAGGAGAAAAGAACTCATCTGAGGACTGCTCTGCTACTTACATTAACAAAAAACTCAAATCAAAGTTCAGCAAAGCCTGGATATCCTTTCTCAAGCTGCCACTTCCGCTTGATGTGTACAAGGAGGTCCTTGCAACAATTCATAAGAATGTAATTCCTTCAATGTCGAACCCGGCCATCTTGTGTGATTTCTTGACTAGATCATATGACATTGGTGGTGTTATCAGTGTGATGGCCCTAAGTGGTCTTTTCATTCTTATGACACAACATGGCCTGGAATATCCAAAATTCTATGACAAACTCTATGCATTACTGACTCCTGCTGTTTTCATGGCGAAACATCGGGCAGTTTTCTTGCAACTTCTGGATGCATGTCTGAAATCTTCATATCTTCCTGCATATCTTGCTGCCGCGTTTGCAAAAAGATTGAGTAGACTAACCCTTTCAGTTCCACCTGCTGGCGCTCTTATTATTATTGCTTTAATTCACAATCTACTGCGGAGGCACCCGTCAATAAATTTTTTGGTCCATTGGGAAATTGATGCAAATGATTCTGAAATCTTTAACGAAGCTAGTCAACGTAAGAAGGTTGGCGCTGATCCTTTCAACAATGAAGAGACTGACCCTGCAAAGTCTGGTGCAATGCGAAGTTCTCTATGGGAAATAGACACACTGCGCCATCATTACTCTCCTGCTGTTTCAAGATTCGTTGCTTCACTTGAAAATGATCTCACTGTTCGGGCCAAAACTACTGAGATGAAAATAACGGACTTTAGTTCAGGCTCCTACGCAACAGTTTTCAGAGATGAGGTACGACGGCGGATAAAACAAGTTCCCCTTGCTTTCTACAGAACTACACCAACTTGTTTATTTCAAGAGTCAGATTTTCCTGGATGGACTTTTAGGGATCAATTCAAAAACATGGCAGAAACTAGTGTAGAAGGCAATGGGATCAGTACGGTAGATATTAGCAACAGCTCGCCCGCCAAAAGGTTGCGGATGGAGACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGRSSSATAAGSKKRRSKTGALTLGEVKTLGEELLSSRANLNHAPTLLALLSPSAPLDLALEALISLQSFFVPLLPSIPSAAATAAAAAGDADPELVFRSWLRKRFDELVAALVELTVSPHSDDAIRDLALDALMDFVKLGKDGRFQSAIYHKFIHNLIHATDSIDPLLELLGPKYFIYTDVCYFTYTSLDKIASSIGNKATGSEKSGLHSGDDGPEDRGTIYVRNIYNTLAHIPALDFQESKFNMWSTVGLSSKGEKNSSEDCSATYINKKLKSKFSKAWISFLKLPLPLDVYKEVLATIHKNVIPSMSNPAILCDFLTRSYDIGGVISVMALSGLFILMTQHGLEYPKFYDKLYALLTPAVFMAKHRAVFLQLLDACLKSSYLPAYLAAAFAKRLSRLTLSVPPAGALIIIALIHNLLRRHPSINFLVHWEIDANDSEIFNEASQRKKVGADPFNNEETDPAKSGAMRSSLWEIDTLRHHYSPAVSRFVASLENDLTVRAKTTEMKITDFSSGSYATVFRDEVRRRIKQVPLAFYRTTPTCLFQESDFPGWTFRDQFKNMAETSVEGNGISTVDISNSSPAKRLRMET</aaseq>

Gene Sequence

<dnaseqindica>1..381#474..566#719..792#958..1016#1084..1132#1659..1753#2558..2592#2661..2762#3181..3239#3320..3494#4285..4458#4646..4757#4876..4933#5027..5132#5466..5666#ATGGGGAGATCGTCGTCGGCGACGGCGGCGGGAAGTAAGAAGCGGAGGTCCAAAACCGGAGCTCTAACCCTAGGGGAGGTGAAGACGCTTGGCGAGGAGCTCCTCTCGTCGCGCGCCAACCTCAACCACGCCCCCACCCTCCTCGCGCTCCTCTCCCCCTCCGCGCCGCTGGACCTCGCGCTGGAGGCGCTCATCTCGCTCCAGTCGTTCTTCGTGCCCCTCCTCCCTTCCATCCCCTCCGCCGCCGCCACGGCCGCCGCGGCCGCGGGGGATGCAGACCCCGAGCTCGTGTTTAGGTCCTGGTTGCGGAAGCGTTTCGACGAGCTCGTTGCGGCGCTCGTCGAGCTCACCGTGTCTCCGCACAGTGATGATGCAATCAGGGTGAGTGCTGCTGCAGCACCTATTCATTTGTGTGCTCGGTTGATGGTTTGATGGTGAATGGTTCGATTAGCATGCTCCTTTGTTCACTGTAGGATCTGGCACTTGATGCGCTCATGGATTTCGTGAAGCTGGGCAAGGATGGGAGATTCCAGTCGGCAATTTACCACAAGTTTATCCACAATTTGGTGAGTTTTTATCCTCTCATGCTGTTGCATCGGTGTGAAATTGGGGAAATACTATAATACTAGCAGTATTTAGGGGTGGTTTGGCTGAGAAGTGAACTCGTGGACTAGTTTTTACTGTTCGCTTGCTGCTAAGTTTGCCTGTTTTTGTGCAGATTCATGCTACCGACTCAATTGATCCTTTGCTAGAGTTGCTTGGACCAAAGTACTTCATATACACTGATGTTTGGTATGTCGTGGTCACCTTTGGAGTAATTTTTGCTGTACTTTAGTATCTGGTCCTGATAATCTTACCTTGAGTGCTTTGCTAACTTGTTCTGCAGTATTTCTACCATGCATTTTTTTAATGTTTTCTTGTAATATACTTAATTGTTTTCTCCATTTGCTTCTGTAGTTACTTCACTTACACTAGCTTAGACAAGATCGCCAGCAGTATAGGCAATAAAGCCACCGGTAATACCCTCTCTCGTTAAAAAATATAACTTATTACAAACTAGTTACCTCATTCTATTCTTATCAGGTTCTGAAAAGAGTGGCTTGCATAGTGGCGATGATGGGCCAGAAGACAGGTATGCTTAAGCTCTTTTACATGATACATATATTAAGATTGGATGATTGTGATCATAAATTCATAGTATTACCTATGGTAAGATCCAACCAATATACCATTGTGCATTGCATTAAATGAGCGTTTCAAATGCCTGCACGCAAATGTTTTGCAGTATTGCTTCGAAAGAAAAAGGTAAGCTGGGAAAGCTTTGTTGTTGTTTTACATGTTCATGTGATCCATCTCTGCCTGTTAAGGAACAATTGGTACTCTGATGTGTTGCTTGTACTTCATGCTTGCATTTCTGTGTTGGTGTGTTCTTGGAAAGTACAATGGCATGTGCTTTTCAAATTTTTACCCCTGCAATATCATTTGAAGACTTGCAGGTAGTGATCTATGTTGTGAATTATTTTGATCGTGTAATTGTTTGATTTAGATATCCCATAAAACACTTGTAGTGTGATTTGCCAATGTTTATACATTTCTAGTTTTTAACAACTTTCTTAGTCCCATTTATATTCTTCTGATCTTCTCTCTTGCTTTAACAGAGGCACTATTTATGTACGCAATATATACAATACTTTGGCGCATATTCCTGCCTTGGATTTTCAGGAGTCAAAGTTTAATATGTGGAGTACTGTTGGTGAGTCTCTTGACTCTTTTGAAGGCTCTATTTTCCAGTATGTAAAAATACTTACAGTTGTCCTTTTATACATTGCATTCCCTTTTTCATGTATGTCCTTATCTATTGAAGAACCTTGAGACCCATTTTCTGTTAGGGGTAGGCAGATATAAACCATTAACTGAAGGCTGAACGAACTTAAGTAGCAGTTTGTCTGGTGGCAGGTTTGGTTTTTATAATTGGCTGCTTCGGTGTTTGGTTGGAAGATCAGTACTTATCTCCCGTAAATCTCCTATAAACCGAGCCTCCTGATAAAACCGAGGACAGTGTTCTCAACAGATAGAGCGCGTGGGAGACCGTGCCTTTTCGTCGCATGATTTTTGCTGACGGTGGCTCCACGCACACGCCCTCGCATGATTCAAGCAGCGGACCCTTGTGGGATCTGGCAGACTACTGCCCAATGGCCATCACACATAGGTGGGGCGGAAGCAGATTGTTCGGTCGGTTTCTTTAGTAAAAAAAACAAAACCGAATCGAAGTAGTTTGGTTTTTCCCTGATGAGATCGGTTGGTGTTTCTTAAAAGCCAAAAATCCACCAAGCGGTAAAAATCGAACCGAAGAACCTGGACGCCCACCCCTACTTTCTGTAATTGTTGAATTCTCTCTCACAAAGACACCCACATGTCTCATAGTCATTGTTCCTTTTGAATGTTCTACTTGCCTACTTCACTTATCCATCTCCGCTCCTTTTCATTTGTTGGTCTTTGCTATGCAACATTGTTGGAATAGTGATGTTATTCTGACTTCTCTTTTTTGTTTGTGAAGGCCTTTCTTCCAAAGGAGAAAAGAACTCATCTGAGGTACTTCATATACACTTCATGAAGTAAACTGCAACTTTGCCTAGTGACTGAGCTTTAACGTTCTGCAGGACTGCTCTGCTACTTACATTAACAAAAAACTCAAATCAAAGTTCAGCAAAGCCTGGATATCCTTTCTCAAGCTGCCACTTCCGCTTGATGTGTACAAGGAGGTTAATCTCTAATTTATCTTAAAGCAATTAGAAATGATGTGATGCTGCTATCTCTCTCTTTTTTTTTCTTGGCTTGAAACCAGACCTTCGCCCTTTCAACATTCTACAATAAGTAGCAATTGGTCTCAATTGCTTCATCTTTAACTTTTTATGAATGGTATAAGTGTTGCATGAGCACTCTTGCAACAGCAATTTTTCCGAGGATGTAATTTATTTATTTACATGTAGCTTTATGGACTTAGTTTACTTGGAGTACTGTAATAATTCAATGGCCAATTAAGGTGATGTAACTATTTGTTCAACAAATTTTGTTGTTTGCTGTTGCCACACTAAGAATTTTGGTCTTGTTTTGTGATACTGCCTTCTTTTAGTGCACATTAACTGCGAGTACTGAGCAGTGATGATCTATAAATTGCAGGTCCTTGCAACAATTCATAAGAATGTAATTCCTTCAATGTCGAACCCGGCCATCTTGTGGTAGGTTATTCCATTTGATCTGCATATTTGTTTGACACCATTAATAGAATTCTCATAACCTCTGTATTTTGGTGTTGAAGTGATTTCTTGACTAGATCATATGACATTGGTGGTGTTATCAGTGTGATGGCCCTAAGTGGTCTTTTCATTCTTATGACACAACATGGCCTGGAATATCCAAAATTCTATGACAAACTCTATGCATTACTGACTCCTGCTGTTTTCATGGCGAAACATCGGGCAGTTTTCTTGCAAGTAAGTATCTCAGTAAATATGATGTGGCATTATCATCTGTTAATCAAGTCATGTCAAGTGTAAACTGATTGCAGCTTGGACTGTTACTCCACCAACACTTTCTATCGTCTTAATAAAATGACTGCCACACCCAGCATCACGTTTTTGAAGGCGTTCTGTAGGATTTCTATAAATCTAATTTTTGTAGATATCCATTTTCCAGCAATCCGTAATATACTTGGTTAGGTCTTAGGCAGTAATCACTCGTCAGGCGGTACAGTAGCAGAATACCCAATCTTGATGTGATAGCTAAAAAGAGAATTAATCATGCAAAAGGTTTATACCAGTTATGGCATATTAGACTTGTTGACTAACCTGATGCCTGCAGCCTCCCACATCCAAATACACCTGTGGTCTTTTTAATATCCATCGGATTGGATAATGGGAACCAAGGAGGGGTATGTTTGCCACCTGCTTTGGCATTGTTTGTCACTCGCTTTATTCTCTTAAGCCACAACTTGCAGCCATTGAGTGACATTCTATAAATTGTGGTTGTGGAAAAAGAGATGGCACTTGACACCCTTAATTCATGTAGACTCATGGGTGCAACTAAGCGAATCAAGGCACTAAATTGTCACCCATATGTTTGAGCTATGAACCACCAATCTTCAATCCATGAATCAACTCGATAATACAAGTTAATATGAGATTTTTTTTGTGCATATTTCTTTTTTTAAGGATTATTTTATTATTCTTACCATCTATTATGGATTTCCTTTTTACATTTTTTGACTTTTTTTTAAAATTGCAGCTTCTGGATGCATGTCTGAAATCTTCATATCTTCCTGCATATCTTGCTGCCGCGTTTGCAAAAAGATTGAGTAGACTAACCCTTTCAGTTCCACCTGCTGGCGCTCTTATTATTATTGCTTTAATTCACAATCTACTGCGGAGGCACCCGTCAATAAATTTTTTGGTCCATTGGGTATGTTACTTGTTGTACCCTTTGGTGCATATATATAATATATAGTAGCTGCTGATTGATATCCTTCCCTGGGCAGCCACTTTGTGCCAACAAAGTGAATGGCATCATGTTCATGTAGTCCACATTCTATGTTCTTTTTTGTGTTGTTCCGTAAGCTGTTTGTATTGCTCTTCTGAATAATTTTCAGGAAATTGATGCAAATGATTCTGAAATCTTTAACGAAGCTAGTCAACGTAAGAAGGTTGGCGCTGATCCTTTCAACAATGAAGAGACTGACCCTGCAAAGTCTGGTGCAATGCGTAAGTGATACCTGTATCAAACATATTTTTCTTCATTTCATTTCTTTGCAATCCTGAATTCCTAAGTTGTCAGTGGTTTTCTGCATACCATGTACTAATACTTGAAAATGCACAACAGGAAGTTCTCTATGGGAAATAGACACACTGCGCCATCATTACTCTCCTGCTGTTTCAAGGTACCGGGAAGCTTGATGCCCTGTTTCTATGACATCTACATTTCTTGTTTGATTGTTTAGCTCATTTATTTTGATACTGTTAACTATTGTCAGATTCGTTGCTTCACTTGAAAATGATCTCACTGTTCGGGCCAAAACTACTGAGATGAAAATAACGGACTTTAGTTCAGGCTCCTACGCAACAGTTTTCAGAGATGAGGTTTGTCTGTCCGATACCTTACACTATACTCACCCTCGTATGTATGCCTGTATGCATGCACATGTATTTTACACCAATGCAAAATATTAGGGATATGTTACATCCAGCGTACCTTTCACTAGATTTCACCATGTGTTCTATGCATATACATATGAACCATGATTACATGGTTTTTTCTATTGAAATGAATCCAACAAACCTGCTTGTTTTTGGAGTTATTGTTAAACCAAAGTTTAGTCTTGTCACTTGTCTTATCCGCTGCCATTTGAGTGTATTATTAAATAATCACTGGGAATTTACTAAAAATCTACCAACCCTGGTTTTGAATTGTAGGTACGACGGCGGATAAAACAAGTTCCCCTTGCTTTCTACAGAACTACACCAACTTGTTTATTTCAAGAGTCAGATTTTCCTGGATGGACTTTTAGGGATCAATTCAAAAACATGGCAGAAACTAGTGTAGAAGGCAATGGGATCAGTACGGTAGATATTAGCAACAGCTCGCCCGCCAAAAGGTTGCGGATGGAGACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014474