BGIOSGA014490

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Revision as of 03:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014490| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014490, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA014490

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014490, complete gene.

LocusTag

OS04G0582900

Ensembl Transcript ID

BGIOSGA014490-TA

Ensembl Protein ID

BGIOSGA014490-PA

Length

4955

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28254496..28259450

Sequence Coding Region

28259379..28259450,28258536..28259295,28257942..28258117,28257372..28257881,28256449..28257283
,28254904..28255153,28254496..28254760

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28254496..28259450 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28254496..28259450 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTAGATTACGATTACGCGCGTCAAGATCAATCCTCCCCTGGTCATGGCCGTGGCCCGGCTTCGCACTAACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTACCCGATCGTCCCCGGAGATGGTGAAGAAAGGTGGTAGAGCCAGGGAGGGGAACAAGAAACCGGACGACGACGATCTCGTCAACACCATCTTCTCCTGGACCCTGGAAGATGTCATGAACCAGAACCTCTTCGCCGACAAGGTTCCATCCATTTCGTTCGTCTTTTCAATTCGTTTGGTGAACGCCATACCTGACAGGTTCTCCGGTCTGAAGAGCTACCTGGATTCGTTCAGGGCCCTGTTGCTGGAAGAGATACGAGCGGAGATGAGCTCTAACCTGGAGACGTTGCCGAACAACAGCTCGTCGACCAAACACATACAATCCCTAGTTCGTGTACCTACGGGCTTGCGACAATGCCCGCTGTATCGCGTCACCATTTCCGACCAACGTGGAGCTTGCGCTCCATGCATCGGTGACATCGTCGTGCTCACGGATACCGTGCCGCGACGGCCGTCCGACCTCGCGAGCAACGGCCGCTCCTGCTGCCTCGCACACGTCAAGGATGTCGTCAACAGACGTACCTTCCTTATCAGAGCGGCCAAGAAAATAGGAGATGCAGACTCGTATGCTTTCGCCGCTAGTTTGCTCGCCTTTATACCCTACGCCCGCATCTGGCGATGTCTTGACTACGATTACGCGCTCAAGATAAATCCTCCCCTTGTCATGGCCGTCGCCGGCGTCGCACTAACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGATGAAGTGCTCGTTGGCATCTTTATGAAAGAAAAGAAGCCTGATGGTTCAGATGCTTGCGTCGGTACAGGGGAAGGGGTTAGCGTAGGCATCATATGCCCGTATGCCGCCCAGGTGGAGGCGATCCAGAGCGGGATAGATGCGAACGCTCTTCGCCCGCTAGACGTGCGCGTCAACTCCGTCGACGGTTTCCAAGGCAGCGAGGAGGACATCATCATCCTGTCCACCGTCAGGTCCAACAGTACAGGATCCATCGGTTTCCTCTCCAACCGTCGCCGCGCCAACGTCGCCCTGACAAGGGCAAGGCATTGCCTCTGGATCCTGGGCGACGCGGCGACGTTGCTCGGCAGCGGCTCCGTCTGGGGGGAGCTGGTCCGGGACGCCGTGGATCGCCGGTGCTTCTACGACTGGGACGACGGCGGCGCTGGTTTGCTCGGCGTTGCTCGGCGCGGACACGAGGACGAGCTGGACGATGCGGTCGAGTTCGCTACGGCGTTTGACACGTTCGCAGACGAAGCGGGGTGCAGAGACGATATCTGCGACGCGCTAGGCTCCCTGAAACTAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MSRLRLRASRSILPWSWPWPGFALTTSLAGSSSFHRANGGTDEITSRLPAFGLNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRLLALSKQHSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTTMLENFRKLLTRSSPEMVKKGGRAREGNKKPDDDDLVNTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRAEMSSNLETLPNNSSSTKHIQSLVRVPTGLRQCPLYRVTISDQRGACAPCIGDIVVLTDTVPRRPSDLASNGRSCCLAHVKDVVNRRTFLIRAAKKIGDADSYAFAASLLAFIPYARIWRCLDYDYALKINPPLVMAVAGVALTTSLAGSSSFHRANGGTDEITSRLPAFGLNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRLLALSKQHSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTTMLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDACVGTGEGVSVGIICPYAAQVEAIQSGIDANALRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRRCFYDWDDGGAGLLGVARRGHEDELDDAVEFATAFDTFADEAGCRDDICDALGSLKLA</aaseq>

Gene Sequence

<dnaseqindica>1..72#156..915#1334..1509#1570..2079#2168..3002#4298..4547#4691..4955#ATGTCTAGATTACGATTACGCGCGTCAAGATCAATCCTCCCCTGGTCATGGCCGTGGCCCGGCTTCGCACTAGTAAGTGACGTGTCAGGTTCTGTACATTACTGCATCAGCTAGCTAGATTTCTCACCTGAGTGATTGACCCTCTTGATCAGCAGACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGACACCAAGTCCGACGCGTCACAGCAACACAGCATGCTTGGAGAAACACAACCGAACGGCCGGCCGCCTCCTCGTCGTCGGCGCGCGAAACCACAGGATATCTCGTGCACCGTTCCGTATCCTAGGCAGGCAATCCGACGCCACCCACACGATGCGCGTCTGCGAGACGAGCCCGTATGCATTCAGATTTCTGCATGGGGAAACGATAGAGCCGAGACAGCAGCGAGCACCATTTACTGCAGCTCTATACCAAGTTCAGACTTCAGAACCTGCAGAATAAAAGGAAGAAGCGCCATCTCCCGCTAGCATCGCGAGCAGCCAAGCATCCAGCCGGCCGGTGTTTAGCCCGATCGTCCCCGGAGATGGTGAAGAAAGGTGGTAGAGCCAGGGAGGGGAACAAGAAACCGGACGACGACGATCTCGTCAACACCATCTTCTCCTGGACCCTGGAAGATGTCATGAACCAGAACCTCTTCGCCGACAAGGTTCCATCCATTTCGTTCGTCTTTTCAATTCGTTTGGTACGTACCTGATCTGAACATGCATGAGCAATGGACATATGAACTCGCATACTTTTGCAGGTGAACGCCATACCTGACAGGTTCTCCGGTCTGAAGAGCTACCTGGATTCGTTCAGGGCCCTGTTGCTGGAAGAGATACGAGCGGAGATGAGCTCTAACCTGGAGACGTTGCCGAACAACAGCTCGTCGACCAAACACATACAATCCCTAGTTCGTGTACCTACGGGCTTGCGACAATGCCCGCTGTATCGCGTCACCATTTCCGACCAACGTGGAGCTTGCGCTCCATGCATCGGTGACATCGTCGTGCTCACGGATACCGTGCCGCGACGGCCGTCCGACCTCGCGAGCAACGGCCGCTCCTGCTGCCTCGCACACGTCAAGGATGTCGTCAACAGACGTACCTTCCTTATCAGAGCGGCCAAGAAAATAGGAGATGCAGACTCGTATGCTTTCGCCGCTAGTTTGCTCGCCTTTATACCCTACGCCCGCATCTGGCGATGTCTTGACTACGATTACGCGCTCAAGATAAATCCTCCCCTTGTCATGGCCGTCGCCGGCGTCGCACTAGTAAGTGAACGTGTCAGTGTTCTGGTACATTTACTGCATCAGCTAGCTAGAATTTCTCACCTGAGTGATTGACCCTCTTGATCAGCAGACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGATGAAGTGCTCGTTGGCATCTTTATGAAAGAAAAGAAGCCTGATGGTTCAGATGGTGGAGTGGTACATTCAGATTTGGTTCGAAATCTTCGGCAGAGCATGACACAAATTCTTGGCGTCATCAGTACTCTTCTGCGAGGGTTGCAGCTTCCTGCAACAACCTCTCCTTTCAAGATCAAGAAATTCTGCCTACGAAGTGCCTCTCTTATTTTCTGCACCGTATCGGGCTCTGCAAAGCTGTACGAGCAGAAAATGGATTTGCTTCTCATCGACGAGGCAGCACAGTTGAAGGAATGCGAATCCCTCATCCCGTTGCAAGTCTCTGGCTTGAAGCATGCTGTTCTTATTGGCGATGAGTGCCAACTGCCTGCTACTGTGAAAAGCAAGGTCCATTCAGTTCTCCTAAAATTTCTTTGCCCTTTTGTTCATGAACTGCTACTACTTTCTTGCGGGCTGCACATATGTTTGTACCATTGTACTCCTGTATGTAGGTTGCTTATATTCATCTTGAGTAATCTTATTTCTTGCAGGCTGCAGATGGTGCCTTACTGGGAAGGAGCCTGTTTGAAAGGTTAACTCTACTGGGACACCAGAAGCACCTTCTGAACATGCAGTACAGGATGCACCCTTCCATTAGCATCTTCCCAAACTTCAGTTTCTACGACAAGAAAATCCTGGATGGGCCGAATGTCACACACGCGAGGCACGAGCGTAGCTTCCTTCAAGGGGCCATGTTTGGGCCGTATTCCTTTATCAACATTGAGAATGGTAGAGAGGATCCTGGCCGCAGCAAGAGAAACATGGCAGAGGTGGCTGCCATCAAGAAAATACTGCATAATCTACGCAAAGGTAACTATCCCCTGTTACTACTCTTGATCCTTGTATCCCTGTATGTTGGTTAACTATTTCGGAATGCAAAGCCATTTCAGGACCGAAATTTCGAAAAATTTCAAACTATATTATAAAATCTGAACAATATTTAGCTACATTTGAGCAGAATTTGCTAGATAAAAAAAATCGGATATAAGTACATCGTATCGTAACTCCATAAACCTTACACCGCATCTTGTATAGTGCATAGTATAGCTTGGTTTTCTTCTTTTCTTTAGCCCTAGGGGTTATAAACCTTACATTCATGTGCTGCTTTCCCTTAAAAAAAACCCTTGAATTTCAATATTCGGTTTTGATATTTCAATATTCAGTTTGATGCTAATTTTTCTCAGACTAGTATAGACTCTACCTTAAATTTAGTGGTGGTAACAAATATGGGTTGGGCAAGTTTTGTCTCCAATCCAAACTACTACTAGTGGCCTGTAAGTTTTGTTTCAAAATACTTTTTCCACCGTGTAGCTTGCGTCGGTACAGGGGAAGGGGTTAGCGTAGGCATCATATGCCCGTATGCCGCCCAGGTGGAGGCGATCCAGAGCGGGATAGATGCGAACGCTCTTCGCCCGCTAGACGTGCGCGTCAACTCCGTCGACGGTTTCCAAGGCAGCGAGGAGGACATCATCATCCTGTCCACCGTCAGGTCCAACAGTACAGGATCCATCGGTTTCCTCTCCAACCGTCGCCGCGCCAACGTCGCCCTGACAAGGGCAAGGTACGCAACGCACAGTCGCACACACGCCTGAATGTTTTCCGGATCAAAGTATGAACGCCAACGCGCCCTCTCATGAACTCGTCGTTGGCATCCGTCCATCCATGGCGGTGTCTCGTTTTGCGCGCCTCTGGTTTTCTTTGCAGGCATTGCCTCTGGATCCTGGGCGACGCGGCGACGTTGCTCGGCAGCGGCTCCGTCTGGGGGGAGCTGGTCCGGGACGCCGTGGATCGCCGGTGCTTCTACGACTGGGACGACGGCGGCGCTGGTTTGCTCGGCGTTGCTCGGCGCGGACACGAGGACGAGCTGGACGATGCGGTCGAGTTCGCTACGGCGTTTGACACGTTCGCAGACGAAGCGGGGTGCAGAGACGATATCTGCGACGCGCTAGGCTCCCTGAAACTAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014490