BGIOSGA014494

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Revision as of 03:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014494| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014494, complete gene.| tag = OsI_171...")
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Gene Name

BGIOSGA014494

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014494, complete gene.

LocusTag

OsI_17107

Ensembl Transcript ID

BGIOSGA014494-TA

Ensembl Protein ID

BGIOSGA014494-PA

Length

5805

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28213790..28219594

Sequence Coding Region

28219391..28219594,28218562..28219110,28218260..28218301,28216722..28217951,28216310..28216637
,28215932..28216187,28215634..28215850,28215506..28215519,28213931..28214099
,28213790..28213816

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28213790..28219594 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28213790..28219594 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGCTCGCAACAAGTCTAGGAGGCAGAAACAAGTCAAGAAATCTGAGTGCGTGGATGCAATCCAGTCTGTGGTGAATTACTGGGAGAAGTTGAAGAAACGTGACAGCAGCCTCAGCAAGTTTGCTCTAAGTTATCTGGTGAGACAAATATTCTCTTGGTCTATCGAGGACGTCTTCAATAAGGAGCTCTTCAAACAGAAGGTGAAAAGGATCCCAGAGACGTTCACTTCATCGTCAAATTACTTTAACTCATTTACCTACCCATTACTTGAAGAAACACATGCTGATGTCTTTTCATCGTTGGATGGTTATTCTCACCAAAACTTCATATCAGTAACCCGAATGAAGGAACTGCTGCATGACGATGAGTCCACGTTCTTCTGTTTTGAGGTTGCAAATCCAGCAAAGGATGAGAAATCCAAGGAAACATATGCGCCATGTGAGGGTGATATAATAGTCCTTACCTCCCGAAAGCCCAAGCAAGTGTCTGATTTGACACGAAATACGACTTCGTACATCCTAGGTTCAATTGTCAAAGGTGGTGAAGACGATGATGATCTCCCAGGCAATTGCTTCATTGCTAGATTGTCATCAGTGCTTCCAGTGGAAACTGATTTTTCAACAAATGAACCAAAGGAGCCATTGTTCGCGGTAATCCTCATAAATATGAAGACATATGATCGGATTTGGGATTGTCTTCATAAGGGAAACAGCCATATTGTTGATACAGTCTGGCGGTACAAGTCAAAGTTTCAACTACCTATTGCTCTGACTGTTGCTTTTGCAACTAAAGAAGTGGATGAGGCTATGTCATCAAGCTCCCAATTATCTCAACGGTTCGCTGCTAGATCAGCTGTTGATCTTAATCTTGAGAAGTACATGCTCAACAATTCACAACTGAATGCTGTTGCAGATTGTGTTCTGGTCTCAGAAAAAATCTCTTCTCCTATTAAACTAATATGGGGACCTCCTGGGACGGGTAAAACCAAAACCATTAGTGCTTTACTCTGGGTAATGTTGCATTCAGGACACCGGACACTTACTTGTGCCCCTACTAATACTGCTGTCCTAGAGGTTGCATCTCGAATTGTCAAGCTCGTTCATGAGTCTCCTGCTAGCAGTGGCCAATATCTAAGCAACATCGTTTTGTTTGGAAACAAGAAGAGGATGAAGATAGGTGAAGATCATGATCTCTCTGTGGTTTTTCTCAGCTCTCGCACCGAGCGGCTGTCACAATGTTTTGAGAGTATGAAAGGATGGAATCATTGCTTGTGTTCACTGATAGATTTTCTTGAGATACCTGTGACAAAAAAATACAAGTGGTACACTGTTCAGATGAAAATGAAAGGACCAAATTCAGTAGTTCTACCACTCAAGGAATTTGTCAAGGACAAATGCAATGAACTTTTGGAAGATTTCTACTATTTCATGGAGATATTATGCACTGATTTTCCACGAAACTCCACGATGCGTCAGAGCTTCCAGTACATGAATGAGGTGGTTGAACCATTGAATATTCTCCATGCATTGATAAATGTTAATGATGATAATGATGACAATTTATGGTTCGATGATCTCTTGAATGGAAAAGGGCATGGGGACAGTGATCCACTCAAGTGGCCAGATCTGCTAGCCTCAGTGCACACGGATGTGTGCAACAAATCAAAGATCAGAAAGGCAAGATTACTCTGTGTTCAAATATTAAGATATCTGAAGATCAACTTGAAGCTTCCTGATTGGGATCGCTTGAGCCTTTCTGATGATGACCGCAAGAGAGAAATTCGAGTCTACCTGTTGCAAAGAACAAAATGCATTCTCTGCACTGTTTCTAGTTCTTATGTGTTGCACAATGTGTCCATGGATGACAGGTCTGAGTGCTTGAAACCTCTGGAACTGTTGGTTGTAGATGAAGCTGCACAGTTAAAAGAGTGTGAGACCTTAATTCCCATGCAGCTGCCTGGCATAAAGCAAGCTGTTTTTATCGGAGACGAATGCCAGCTACCTGCTCTGGTTAAAAGCAAAATTTCTGATAATGCTGATTTCGGAAGAAGTGTTTTTGAGAGGTTAAGTTCCTTGGGCTACAACAAGCACCTCCTGAACATTCAGTACAGGATGCGACCAGAGATAAGCAAGTTTCCAGTTGCCAGTTTTTATGATGGCAAGATCTCAGATGGTCCAAATGTTGTCAGCAAGAACTACAAGAGGAACATTTTGCCAGGCAAAATGTTTGGACCTTACTCGTTTATAAATGTAGATGGTGGCCATGAAACAACTGAAAAACATGGCCGGAGCCTTAAAAATACCATAGAAGTTGCTGCTGTGCTGTGGATCGTGCGGAGACTATTTGAAGAATCGGTTTTTTTGGGAAGCAAGCTCACTGTTGGTGTAGTGTCACCGTACAATGCTCAAGTTAGAGCTATCCAAGAGAAAATTGGTAAGACTTACGATATGTATGATGGTTTCTCTGTGAAGGTAAAATCGGTGGATGGTTTCCAAGGTGCGGAGGAGGATGTCATCATCATATCTACTGTCAGAAGTAACAGAGCTGGTTCAGTTGGGTTTCTCACAAACCTGCAGCGGACAAATGTGGCTCTGACAAGGGCTAAGCACTGTTTGTGGATAGTAGGAAATGGGACGACTTTGTCCAACAATAGATCTGTTTGGCAGAAAGTGGTGAATGATGCAAAGCATCGAGGTTGCTTTTTCGAGGCAAGCGAGGATAAACATTTATCCAATGCAATTGTCAATGCTGTTATTGAGCTCGATGATGCTGAGAATTTAGTAAAAATGGACTCGCTCCAGATCACCAATCCCAGGTTTCAGAGAGCCGGGCCGAGATCTGTTTGGCAGAAAGTGGTGAATGATGCAAAGCATCGAGGTTGCTTTTTCGAGGCAAGCGAGGATAAACATTTATCCAATGCAATTGTCAATGCTGTTATTGAGCTCGATGATGCTGAGAATTTAGTAAAAATGGACTCGCTCCAGATCACCAATCCCAGGTTTCAGAGAGCCGGGCCGAGGTACCGTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSARNKSRRQKQVKKSECVDAIQSVVNYWEKLKKRDSSLSKFALSYLVRQIFSWSIEDVFNKELFKQKVKRIPETFTSSSNYFNSFTYPLLEETHADVFSSLDGYSHQNFISVTRMKELLHDDESTFFCFEVANPAKDEKSKETYAPCEGDIIVLTSRKPKQVSDLTRNTTSYILGSIVKGGEDDDDLPGNCFIARLSSVLPVETDFSTNEPKEPLFAVILINMKTYDRIWDCLHKGNSHIVDTVWRYKSKFQLPIALTVAFATKEVDEAMSSSSQLSQRFAARSAVDLNLEKYMLNNSQLNAVADCVLVSEKISSPIKLIWGPPGTGKTKTISALLWVMLHSGHRTLTCAPTNTAVLEVASRIVKLVHESPASSGQYLSNIVLFGNKKRMKIGEDHDLSVVFLSSRTERLSQCFESMKGWNHCLCSLIDFLEIPVTKKYKWYTVQMKMKGPNSVVLPLKEFVKDKCNELLEDFYYFMEILCTDFPRNSTMRQSFQYMNEVVEPLNILHALINVNDDNDDNLWFDDLLNGKGHGDSDPLKWPDLLASVHTDVCNKSKIRKARLLCVQILRYLKINLKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVSSSYVLHNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQEKIGKTYDMYDGFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNNRSVWQKVVNDAKHRGCFFEASEDKHLSNAIVNAVIELDDAENLVKMDSLQITNPRFQRAGPRSVWQKVVNDAKHRGCFFEASEDKHLSNAIVNAVIELDDAENLVKMDSLQITNPRFQRAGPRYRA</aaseq>

Gene Sequence

<dnaseqindica>1..204#485..1033#1294..1335#1644..2873#2958..3285#3408..3663#3745..3961#4076..4089#5496..5664#5779..5805#ATGAGTGCTCGCAACAAGTCTAGGAGGCAGAAACAAGTCAAGAAATCTGAGTGCGTGGATGCAATCCAGTCTGTGGTGAATTACTGGGAGAAGTTGAAGAAACGTGACAGCAGCCTCAGCAAGTTTGCTCTAAGTTATCTGGTGAGACAAATATTCTCTTGGTCTATCGAGGACGTCTTCAATAAGGAGCTCTTCAAACAGAAGGTGTCAATTTCTTAGTTACTTTCTTTCTCTTTTCTATGTTGCACTCTAAGGCCTAAGCATTGCTAGTTTTAGAATTCTGTAACTGGATTGTATACTCTTGTTTCTGAAATTTAATGCAATCTCCTATCTTCCCTAAAAACATTTCGTTTTTTGGTCTACTCCTTCCTGTCAAATAAATTTGACATTGGGAGTATTAGTTCAAGTACCCCCAACATCAAATATATTTGACCGGCGGGAGTAGTATTGAGTCACAGATAGTTGATTATTTGTTTCTTTCCAGGTGAAAAGGATCCCAGAGACGTTCACTTCATCGTCAAATTACTTTAACTCATTTACCTACCCATTACTTGAAGAAACACATGCTGATGTCTTTTCATCGTTGGATGGTTATTCTCACCAAAACTTCATATCAGTAACCCGAATGAAGGAACTGCTGCATGACGATGAGTCCACGTTCTTCTGTTTTGAGGTTGCAAATCCAGCAAAGGATGAGAAATCCAAGGAAACATATGCGCCATGTGAGGGTGATATAATAGTCCTTACCTCCCGAAAGCCCAAGCAAGTGTCTGATTTGACACGAAATACGACTTCGTACATCCTAGGTTCAATTGTCAAAGGTGGTGAAGACGATGATGATCTCCCAGGCAATTGCTTCATTGCTAGATTGTCATCAGTGCTTCCAGTGGAAACTGATTTTTCAACAAATGAACCAAAGGAGCCATTGTTCGCGGTAATCCTCATAAATATGAAGACATATGATCGGATTTGGGATTGTCTTCATAAGGGAAACAGCCATATTGTTGATACAGTCTGGCGGTACAAGTCAAAGGTATTTTCAGTTTGTAGATGCATAATAAAAAAATGTGGGACACTGTGGTGTAGCCTGGTCTCGATTTAATTAAGAAGGAATAGGCACCTAAATTCTAGTTAAATAGTAGCGGGGGGTGTAAACCACACCCTCCAACCAAAGTGCTAGGGCCAGTTCCTTGTAGATGCATAATAGCATATCTATTTGTCATGTCTAATTGTCTAATTGTTTGAGTCATTAAATTTCAGCACCCTATTGGCTCTTGATGCATGATACTCCAGTTTCAACTACCTATTGCTCTGACTGTTGCTTTTGCAACTAAAGTAAGAAACACACTTAAAAGTTACAATCTTGGCATTCCTATATGCGCTAAATTAGCTTGAGTAGTGATGTTTTTGGAATTTGAAGTGCGGGTCATGCTTCTTGGCTACCACACGTGTTAAATCTTCAGTATGTTGTTTAGATTGGAATATGAATCTGATATATTTTAAAGATTCAAATGATACAGTGCCCTTATTTGTCAACACTTGGTAATGAACTAATGGCATTTTCCCAAGTGCATATAAACAACACTATCTTGTTAGTAGTATTTCTGATGATTGAATTGTTTGCACAACATTTATTTGTGAAGGAAGTGGATGAGGCTATGTCATCAAGCTCCCAATTATCTCAACGGTTCGCTGCTAGATCAGCTGTTGATCTTAATCTTGAGAAGTACATGCTCAACAATTCACAACTGAATGCTGTTGCAGATTGTGTTCTGGTCTCAGAAAAAATCTCTTCTCCTATTAAACTAATATGGGGACCTCCTGGGACGGGTAAAACCAAAACCATTAGTGCTTTACTCTGGGTAATGTTGCATTCAGGACACCGGACACTTACTTGTGCCCCTACTAATACTGCTGTCCTAGAGGTTGCATCTCGAATTGTCAAGCTCGTTCATGAGTCTCCTGCTAGCAGTGGCCAATATCTAAGCAACATCGTTTTGTTTGGAAACAAGAAGAGGATGAAGATAGGTGAAGATCATGATCTCTCTGTGGTTTTTCTCAGCTCTCGCACCGAGCGGCTGTCACAATGTTTTGAGAGTATGAAAGGATGGAATCATTGCTTGTGTTCACTGATAGATTTTCTTGAGATACCTGTGACAAAAAAATACAAGTGGTACACTGTTCAGATGAAAATGAAAGGACCAAATTCAGTAGTTCTACCACTCAAGGAATTTGTCAAGGACAAATGCAATGAACTTTTGGAAGATTTCTACTATTTCATGGAGATATTATGCACTGATTTTCCACGAAACTCCACGATGCGTCAGAGCTTCCAGTACATGAATGAGGTGGTTGAACCATTGAATATTCTCCATGCATTGATAAATGTTAATGATGATAATGATGACAATTTATGGTTCGATGATCTCTTGAATGGAAAAGGGCATGGGGACAGTGATCCACTCAAGTGGCCAGATCTGCTAGCCTCAGTGCACACGGATGTGTGCAACAAATCAAAGATCAGAAAGGCAAGATTACTCTGTGTTCAAATATTAAGATATCTGAAGATCAACTTGAAGCTTCCTGATTGGGATCGCTTGAGCCTTTCTGATGATGACCGCAAGAGAGAAATTCGAGTCTACCTGTTGCAAAGAACAAAATGCATTCTCTGCACTGTTTCTAGTTCTTATGTGTTGCACAATGTGTCCATGGATGACAGGTCTGAGTGCTTGAAACCTCTGGAACTGTTGGTTGTAGATGAAGCTGCACAGTTAAAAGAGTGTGAGACCTTAATTCCCATGCAGCTGCCTGGCATAAAGCAAGCTGTTTTTATCGGAGACGAATGCCAGCTACCTGCTCTGGTTAAAAGCAAAGTATGTGTCTAGTGCTAATGCTTTATTCCACTTTGTTTTCCCATGTTTAAACTTCAAAATAACCAAGTGTTTTTACTCTTGCAGATTTCTGATAATGCTGATTTCGGAAGAAGTGTTTTTGAGAGGTTAAGTTCCTTGGGCTACAACAAGCACCTCCTGAACATTCAGTACAGGATGCGACCAGAGATAAGCAAGTTTCCAGTTGCCAGTTTTTATGATGGCAAGATCTCAGATGGTCCAAATGTTGTCAGCAAGAACTACAAGAGGAACATTTTGCCAGGCAAAATGTTTGGACCTTACTCGTTTATAAATGTAGATGGTGGCCATGAAACAACTGAAAAACATGGCCGGAGCCTTAAAAATACCATAGAAGTTGCTGCTGTGCTGTGGATCGTGCGGAGACTATTTGAAGGTAGGATCATCTGCATTTCTGGAGCTTTGGTGCTATAAATGATATATGTGAACATAATATGTATGATATTCATGCTGTCTTAACCACCAGTATTGCTAACCCCGCATCTTTTGTTGTTACAGAATCGGTTTTTTTGGGAAGCAAGCTCACTGTTGGTGTAGTGTCACCGTACAATGCTCAAGTTAGAGCTATCCAAGAGAAAATTGGTAAGACTTACGATATGTATGATGGTTTCTCTGTGAAGGTAAAATCGGTGGATGGTTTCCAAGGTGCGGAGGAGGATGTCATCATCATATCTACTGTCAGAAGTAACAGAGCTGGTTCAGTTGGGTTTCTCACAAACCTGCAGCGGACAAATGTGGCTCTGACAAGGGCTAAGTAAGTGTAATGGTTGCCCTTACAATTAACAATTTGCTAATTGCTCCTTTTAGTTAGTTATTTGGCTTATGTTTGTGGCAGGCACTGTTTGTGGATAGTAGGAAATGGGACGACTTTGTCCAACAATAGATCTGTTTGGCAGAAAGTGGTGAATGATGCAAAGCATCGAGGTTGCTTTTTCGAGGCAAGCGAGGATAAACATTTATCCAATGCAATTGTCAATGCTGTTATTGAGCTCGATGATGCTGAGAATTTAGTAAAAATGGACTCGCTCCAGATCACCAATCCCAGGTTTCAGGTATTGAAAAGAATTGGCAAAATCACATCATCCCATGGTTATTGTTAGTCCTTTAACTTCAGCATGGGCATAATCGGTTAGAACTAATTACATTTTTCCTTTCTTTGTTTGCAGAGAGCCGGGCCGAGGTACCGTGCATGAGTGGTCTAGGCCACCCAGTTTTAGTTCCATGTTGTAATGCCTCGAATGTGTGGGATAGCGTACTACGCGTCATGCTTTTGCCACCTGGACTTGCTAAGGGAAGTTTCCATCGACGACGCGGCAGATATTGTCGGGCGCGCTTCATTTTGTTGAACCTGAGCTCGTCGTATGCCAGCTGCACAAGCTCGCTTATTTAATCGATTTGCCTGTCTTAATCTGCGGACGTCATTTTAATACAGTGGTGTTCTATGGACTTTGGGCAATCCATGTTGCAATGTGGTCGTTATTCATTACACATGTGTGCAGTGTGCTGTGCCAGTGTGTTGCTGCAGTTGTGTACTTGTGTTCGGGATAAGAGGGATTGTGTCGTGGTGGGCTGTGGCCATGCGTGCCTAGCGCGGTGAACCTCTGCAGTAGATGTGATGCGAAGGCTAGCGAGTGGGGAGCGTTGGTACAACGGCGTCCACACGCTGACGGAGTATGGCCGGTGGTAGAGCAATTGAGCAATAGCTGCGGATCAACAGGGGGTGGGTGGCAGGTGTGAACCTAGCTTGATCTTGTCGGGCCGACAACAACGGTGCTTCGAGCGTCGTTTTCCCTCTCGGGGGCGTTGTCGAGTTGGTCGGGTGAAAAATCCTATTTTGGTTCTCCTTGAGATCTTGATTGACAGTGGCACCGGCGCTCACCATCGCTCTTCTTTCTAGAGACGTCGTCTAGAAAGCCTCCATGACAAAACTTCTCAAGCAGCTTGTGCGAGTTTTCTCTAGATATTTGATCCTCTGGCGGTGGCGCCCTAGCTAATATAAGTTGGCTATGTTGGCGGACCTTGTGGGGGGAGAGTTGATCCATTCTCTCACTCTCCCTGCAATCCCAAAGGTGTGGATAGTGTTGAGTATGGGGCTCGGCTGTTAGGATTTGGTTTGCATAGTTTGGTTGTTGCTTTTTGTTGATTTAGCGGTGGCGGTCCGGTGCTATTCTTTTCCTGTGTAGATGCTATCAGTGTATGGTATTAGCCTTGTAGTTTTTTTTTCTACTTTATTCAATTAAACAACGTATTTTCTGGTGATATTCGTTGAAAAGAAAGTACCCAGCCACATAGGGCGATACTAATGTTGCTAGAAGGTATGTAATAAGAAGATTGGAAAGGATGGATCATGCACAGGTATATTTAAAACCGATCTATACTTCAATAAAATAAAGCAGATTGTTTAAACAGGATAAAAGGCTAATATAAAGAATATTATCCAGTCTGGAGAAGTCCTCATCTGTTAGTGGATCATGACATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGGCAGGCACTGTTGTGGATAGTAGGAAATGGGACGACTTTGTCCAACAATAGATCTGTTTGGCAGAAAGTGGTGAATGATGCAAAGCATCGAGGTTGCTTTTTCGAGGCAAGCGAGGATAAACATTTATCCAATGCAATTGTCAATGCTGTTATTGAGCTCGATGATGCTGAGAATTTAGTAAAAATGGACTCGCTCCAGATCACCAATCCCAGGTTTCAGGTATTGAAAAGAATTGGCAAAATCACATCATCCCATGGTTATTGTTAGTCCTTTAACTTCAGCATGGGCATAATCGGTTAGAACTAATTACATTTTTCCTTTCTTTGTTTGCAGAGAGCCGGGCCGAGGTACCGTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014494