BGIOSGA014509

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Revision as of 03:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014509| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014509, complete gene.| tag = H0404F0...")
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Gene Name

BGIOSGA014509

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014509, complete gene.

LocusTag

H0404F02.15

Ensembl Transcript ID

BGIOSGA014509-TA

Ensembl Protein ID

BGIOSGA014509-PA

Length

2609

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27975434..27978042

Sequence Coding Region

27977910..27978042,27977343..27977520,27976977..27977211,27976566..27976893,27975574..27976488
,27975434..27975525

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27975434..27978042 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27975434..27978042 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCTCCTGGCCGCCGCCGTGTTCGTTGGGTGGCTCATGATGTGGGTCATGTTGCCGACCAGGACATTCAGCTCGACGTGGGCGCCGACGCTCGCCTCCCACACAAATTCCACCTACTTTGGCAAACAAGTATTCTGTACGAGAATGGCGGCCTGGAGGAGACCTGTGCTGGTGAGAGGTCCACTGGGAATTGTGACAGGCATAGAACTCGCCTTCTTTCTCTTGTTCCTGGCACTCCTGGTCTGGTCCTACTCCGCCTTCATCAACCTCGACTTCTCCAAGATCCATGTCAAGCCTGTCGAGAAAATGTGGCAGGCGAAGCTGGACAGAGCAGCGCTGCGGCTTGGCCACGTTGGGAGCTTCTGCTGCGCGTTCCTGTTCTTTCCAGTCGCACGCGGCTCGTCCCTGTTGCCGCTCATTGGCCTCACGTCGGAAGCCAGCATCAAGTACCATGTCTGGCTGGGCAATCTCGTTATGCTCTTCTTCACAGCTCATGGACTCTGCTACATCGTCTTCTGGGCATCGACTGATCAAATCCACGAGATGCTGAAATGGACAAGAACGAAAGTTGCAAACGTCCCCGGGGAGCTCGCGCTGCTCAGCGGGCTGGTGATGTGGGTGACGGCGCTGCCGCGCGTCCGGCGCCAGATGTTCGAGCTCTTCTTCTACGCGCACCACCTCTACGCCCTCTTCCTCGTGCTCTTCGCGCTCCACGTCGGCGTCGCCTTCTTCTGCTCCATCCTGCCTGGCGTGTTCCTCTTCATGGTCGACCGCTACCTCCGGTTCCTGCAGTCCCGCGTCCGCGTCCGACTCGTCTCCGCCCGCCTCCTAGCGTGCGACGCCGTCGAGCTCAACTTCTGCAAAAGCCCCCATTTGACGCACAGTCCGATGAGTACGGTGTTCATCAACGTCCCATGCGTTTCGCGGCTCCAATGGCACCCATTCACGGTGACGTCGAGCAGCAGCCTTGAGCCTGACAGGTTAAGCGTCGTCGTCAAGAGAGCAGGAAGATGGACGGAGAAGCTGTACGAGACGATCTCGTCCCTGCCGCCGTCGCAGCCCGGGCACCTCGACGTCTCGGTCGAGGGGCCTTACAGCCAGGCCACACCAGCAAGCTTCCTTCAGTACGACTCGTTGGTGATGATCAGTGGTGGCGGCGGCATCACGCCGTTCATCTCCGTCATACGCGAGCTCGTTCACCGGAGCGGCACGGCGGCAGAAGCCGCGACGCCGAGCCTTCTCCTCATCGCCGTGTTCAAGACGTCGGCTGACCTGGCCATGCTGGACCTCATCGTCCCTGCCTCCGGTGGGTTCTCCGACATCTCCCGCCTCGAACTGCGCATCGAGGCCTTCGTGACGCGAGAAAGCGTGCCCTCCGCGGGCGATGTCGTCGCAATCGCGCACAAGGTGCCCGCAGAGGAGGTCTTGTTCAAGCCGTCGCCGTCGCACGCGCCCATCGCCCCGGTGCTCGGCCACAACGGCTGGCTCTGGCTCGCCGCCGTCGTCTCCTCCTCATTCTTCATCTTCCTCTTGTTCGTCGGCGCGGTGCAGCGCCTGTACATATACCCCGTCGACGGCAACAGCAACCGCGTGTACCCGTGGGCGGCAAGGACGTTGCTAAACCTGCTGCTCCTCTGCGTCGGCATCGCCGTGGCGGCGAGCGCGGCCGTCCTGTGGAACAAGCGGAGGAGGGCCGAGGAGGCGAAGCAGGTCGAGAACGTGGCGACGCCAGCGTCGTCGCCGGCAACGTGGCTCGACAAGCCGCGTCGTGGGGACGCAGAGGTAGGCCCTCGTCCCGATCTCAGAAGTACGATGCACCGTTCAATCTTGTTTTCCTTTTGGGTCGAATTGGTTCTGTTACCTTTGAAGAGTGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MLLLAAAVFVGWLMMWVMLPTRTFSSTWAPTLASHTNSTYFGKQVFCTRMAAWRRPVLVRGPLGIVTGIELAFFLLFLALLVWSYSAFINLDFSKIHVKPVEKMWQAKLDRAALRLGHVGSFCCAFLFFPVARGSSLLPLIGLTSEASIKYHVWLGNLVMLFFTAHGLCYIVFWASTDQIHEMLKWTRTKVANVPGELALLSGLVMWVTALPRVRRQMFELFFYAHHLYALFLVLFALHVGVAFFCSILPGVFLFMVDRYLRFLQSRVRVRLVSARLLACDAVELNFCKSPHLTHSPMSTVFINVPCVSRLQWHPFTVTSSSSLEPDRLSVVVKRAGRWTEKLYETISSLPPSQPGHLDVSVEGPYSQATPASFLQYDSLVMISGGGGITPFISVIRELVHRSGTAAEAATPSLLLIAVFKTSADLAMLDLIVPASGGFSDISRLELRIEAFVTRESVPSAGDVVAIAHKVPAEEVLFKPSPSHAPIAPVLGHNGWLWLAAVVSSSFFIFLLFVGAVQRLYIYPVDGNSNRVYPWAARTLLNLLLLCVGIAVAASAAVLWNKRRRAEEAKQVENVATPASSPATWLDKPRRGDAEVGPRPDLRSTMHRSILFSFWVELVLLPLKSA</aaseq>

Gene Sequence

<dnaseqindica>1..133#523..700#832..1066#1150..1477#1555..2469#2518..2609#ATGCTTCTCCTGGCCGCCGCCGTGTTCGTTGGGTGGCTCATGATGTGGGTCATGTTGCCGACCAGGACATTCAGCTCGACGTGGGCGCCGACGCTCGCCTCCCACACAAATTCCACCTACTTTGGCAAACAAGGTTTTTTTCCCCATCTCTTGTACTATCAGCTCAGCTGTATATCCATTCCACTGCATGTCTGCATTGCCGCCGTGATCATCTCTTCGTGTTCTTCGTTTCGGGATTTGCAGGGACGAGAATCGTGATCTACGTGTTCCCAATACCTGTGCATGTCTGAATCGTGAACTACACTGACTTTGCCAATACTGTTTGTCAGTGTAGTTGCGTGCATTTACCTGCACTTGCTGAAGAGGAGCGGCGACAGTACTGGGGTCCAAAGTCAGAGGTACGGTCAGTTCTGGCTAAACTGGGAGAGGAGATCAATCTCATCAGACATTCCGCATCAAATGTACTAGTACTAATGCAAATTTTCTGCGTGTTCCTCTCTTGATTTTGTTCCTGCAGAGGAGTATTCTGTACGAGAATGGCGGCCTGGAGGAGACCTGTGCTGGTGAGAGGTCCACTGGGAATTGTGACAGGCATAGAACTCGCCTTCTTTCTCTTGTTCCTGGCACTCCTGGTCTGGTCCTACTCCGCCTTCATCAACCTCGACTTCTCCAAGATCCATGTCAAGCCTGTCGAGAAAATGTCGACCAACTCACGATAACCATGCATTAACTCCGTCCAAAAAAAAAGCAAAATAATACTCGTATATGTTTCATCTATGATCTGTAATTTACTTGTGTGCTAACTTTTGTAAGTATGCGAAATGTTCTTAGGTGGCAGGCGAAGCTGGACAGAGCAGCGCTGCGGCTTGGCCACGTTGGGAGCTTCTGCTGCGCGTTCCTGTTCTTTCCAGTCGCACGCGGCTCGTCCCTGTTGCCGCTCATTGGCCTCACGTCGGAAGCCAGCATCAAGTACCATGTCTGGCTGGGCAATCTCGTTATGCTCTTCTTCACAGCTCATGGACTCTGCTACATCGTCTTCTGGGCATCGACTGATCAAATCCACGAGGTAATACAAACTAACGATTTCTTCTATCGTCCTAGACATGTCCAATGTCGGGACTTAATAAACGGCCAATTATGTGATTCCAGATGCTGAAATGGACAAGAACGAAAGTTGCAAACGTCCCCGGGGAGCTCGCGCTGCTCAGCGGGCTGGTGATGTGGGTGACGGCGCTGCCGCGCGTCCGGCGCCAGATGTTCGAGCTCTTCTTCTACGCGCACCACCTCTACGCCCTCTTCCTCGTGCTCTTCGCGCTCCACGTCGGCGTCGCCTTCTTCTGCTCCATCCTGCCTGGCGTGTTCCTCTTCATGGTCGACCGCTACCTCCGGTTCCTGCAGTCCCGCGTCCGCGTCCGACTCGTCTCCGCCCGCCTCCTAGCGTGCGACGCCGTCGAGCTCAACTTCTGCAAAAGCCCCCGTAGGTGTCACATATATCCGACACGTTCACGGTGCAAGTAAGCATGTTCTGACACTTGATGTCGTGATCACTTGCAGATTTGACGCACAGTCCGATGAGTACGGTGTTCATCAACGTCCCATGCGTTTCGCGGCTCCAATGGCACCCATTCACGGTGACGTCGAGCAGCAGCCTTGAGCCTGACAGGTTAAGCGTCGTCGTCAAGAGAGCAGGAAGATGGACGGAGAAGCTGTACGAGACGATCTCGTCCCTGCCGCCGTCGCAGCCCGGGCACCTCGACGTCTCGGTCGAGGGGCCTTACAGCCAGGCCACACCAGCAAGCTTCCTTCAGTACGACTCGTTGGTGATGATCAGTGGTGGCGGCGGCATCACGCCGTTCATCTCCGTCATACGCGAGCTCGTTCACCGGAGCGGCACGGCGGCAGAAGCCGCGACGCCGAGCCTTCTCCTCATCGCCGTGTTCAAGACGTCGGCTGACCTGGCCATGCTGGACCTCATCGTCCCTGCCTCCGGTGGGTTCTCCGACATCTCCCGCCTCGAACTGCGCATCGAGGCCTTCGTGACGCGAGAAAGCGTGCCCTCCGCGGGCGATGTCGTCGCAATCGCGCACAAGGTGCCCGCAGAGGAGGTCTTGTTCAAGCCGTCGCCGTCGCACGCGCCCATCGCCCCGGTGCTCGGCCACAACGGCTGGCTCTGGCTCGCCGCCGTCGTCTCCTCCTCATTCTTCATCTTCCTCTTGTTCGTCGGCGCGGTGCAGCGCCTGTACATATACCCCGTCGACGGCAACAGCAACCGCGTGTACCCGTGGGCGGCAAGGACGTTGCTAAACCTGCTGCTCCTCTGCGTCGGCATCGCCGTGGCGGCGAGCGCGGCCGTCCTGTGGAACAAGCGGAGGAGGGCCGAGGAGGCGAAGCAGGTCGAGAACGTGGCGACGCCAGCGTCGTCGCCGGCAACGTGGCTCGACAAGCCGCGTCGTGGGGACGCAGAGGTAGAAAGTTCGCCTCTGCATTACCTCGAACAGGCAACCGCGGTGCACTTCGGCCCTCGTCCCGATCTCAGAAGTACGATGCACCGTTCAATCTTGTTTTCCTTTTGGGTCGAATTGGTTCTGTTACCTTTGAAGAGTGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014509