BGIOSGA014542

From RiceWiki
Revision as of 04:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014542, complete gene.| tag = OsI_169...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014542, complete gene.

LocusTag

OsI_16993

Ensembl Transcript ID

BGIOSGA014542-TA

Ensembl Protein ID

BGIOSGA014542-PA

Length

1747

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27047524..27049270

Sequence Coding Region

27048959..27049270,27048603..27048788,27047524..27047679

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27047524..27049270 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27047524..27049270 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCGGCGGTGCGGGCGGCGGCGGCGGACGCAGCGGTGACGTTCCTGTGGGTGCTGTGCGTGTCGACGCTGGGGGCGTCGACGGCGGCGGTGACGTCGTACCTCCGCATCCACGAGGGGATCCACTACGCGCTCCTCGTCACCGTCTCCCTCCTCTCCGTGCTCCTCTTCGCCTTCAACCTCCTCTGCGACGCCCTCGGCGGCGCCAGCTTCAACCCCACCGCCCTCGCCGCCTTCCACGCCGCCGGCCTCTCCTCCCCCCGCCACTCCTCCCTCTTCCCCCTCGCCCTCCGCTTCCCCGCCCAGGTGGATCTCCACACGGGTGCCGCCGCCGAGCTGGTGCTCACCTTCGTCATCACCTTGGCCGTGCTCTGGATCATCGTCAAGGGGCCCCGTAATCCCATCGTCAAGACCTGGATGCTCTCCATCTCCACCGTTTGCCTCGTCCTCACCGGCGCTGCCTACACTGGCCCATCCATGAACCCTGCCAATGCGTTTGGCTGGGCATATGTGAACAATCGCCACAACACATGGGAGCAATTCTACGTCTACTGGATATGCCCTTTTGTTGGCGCTGTTCTTGCTGCCTGGGTCTTCAGGGCCGTGTTCCCACCACCGGCACCTAAACCTAAGGCCAAGAAAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MAVAAVRAAAADAAVTFLWVLCVSTLGASTAAVTSYLRIHEGIHYALLVTVSLLSVLLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVFPPPAPKPKAKKA</aaseq>

Gene Sequence

<dnaseqindica>1..312#483..668#1592..1747#ATGGCGGTGGCGGCGGTGCGGGCGGCGGCGGCGGACGCAGCGGTGACGTTCCTGTGGGTGCTGTGCGTGTCGACGCTGGGGGCGTCGACGGCGGCGGTGACGTCGTACCTCCGCATCCACGAGGGGATCCACTACGCGCTCCTCGTCACCGTCTCCCTCCTCTCCGTGCTCCTCTTCGCCTTCAACCTCCTCTGCGACGCCCTCGGCGGCGCCAGCTTCAACCCCACCGCCCTCGCCGCCTTCCACGCCGCCGGCCTCTCCTCCCCCCGCCACTCCTCCCTCTTCCCCCTCGCCCTCCGCTTCCCCGCCCAGGTATAAACTACTCAATCTCCTCCCAATCCCCCTCGCTTTCTTCTCCTTCGATTGCTGATGAGAATTTGGTTTGGCTTGGCAGGCCGCGGGTGCGGTGGGTGGGGCGATGGCGATCTCGGAGCTGATGCCGGAGCAGTACAAGCACATGGCTCGGGGGGCCATCGCTCAAGGTGGATCTCCACACGGGTGCCGCCGCCGAGCTGGTGCTCACCTTCGTCATCACCTTGGCCGTGCTCTGGATCATCGTCAAGGGGCCCCGTAATCCCATCGTCAAGACCTGGATGCTCTCCATCTCCACCGTTTGCCTCGTCCTCACCGGCGCTGCCTACACTGGCCCATCCATGAACCCTGCCAATGTGAGATTTCGGTTCTTCCTTTAGGTTTTTTTCTAGTTACTGATCTTGGTATATTATTATTATTATCAAAATATATCAACATCAATTGCTCTCACTTGCACGACGCTACTATTATGCAATTGGTTTTTCAAGACAACATGGAGCTAAGGATTAATTCGGCACGATGCTTACTACTATGCAATTGGTTTTTCAAGACAACATGGAGCTAGGATTAATTCAGGAGCACCCGCGATAGTTTGGTAGCTTGTTGATGAATTAATAGGAAACGGAGTCCCAAGTCATTTGTGCCAAAAACCTGAGTGATAAAAATGTTGATCGTGCATTATCTATCCCCTTTTATGGTGCTTATCAAACACGCCGTCAGGCTAAGCTCTTTTTATTTATGTTTTTTTTGCTCTTGTTTTAAATTACTAAGCAACAGGTCAAATGAAGCAACTAAATAGATGTAATTTTCAAAAAGTTCCACTCTTTCCTTAAATCTCCTTCATCAGGAAGGAGTCAGTATTATTATTGGACGTCCACAGTTTTGGTTGGAGTGTACACAATAGGCATAAAACCGTTGCCAGTGATCTCATTAATTAAAAACCTTGCGTGTTTATGGGGAAAAACTATGGAAAAATAGTGCCTGATTATACTTATATTCTGCAGAGGGTAACTCAGTTAATTTCTATTTGGTCACTCCTGTCCACTTCAATTAGGTGATTTAGTGGAAATTCCTTGTATACCTCTGAAATCGAGATCTTTGCAGAGTTGAGAATGCATTGCAAATTGTTCCTGTAATTTGAATTCATGCTACTGTATTCCATTTATACATCCAGTAGGATCTGATGTTAAGTTGCCGCTCTTCTCATTTGCCCTTTTTGGCTACTGTTCCTTGTTTTCTGGTAACTAATCTTGGTTAAATATTATCTACAATTCCACAGGCGTTTGGCTGGGCATATGTGAACAATCGCCACAACACATGGGAGCAATTCTACGTCTACTGGATATGCCCTTTTGTTGGCGCTGTTCTTGCTGCCTGGGTCTTCAGGGCCGTGTTCCCACCACCGGCACCTAAACCTAAGGCCAAGAAAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014542