BGIOSGA014583

From RiceWiki
Revision as of 04:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014583| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014583, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014583

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014583, complete gene.

LocusTag

OSIGBA0143N19.11

Ensembl Transcript ID

BGIOSGA014583-TA

Ensembl Protein ID

BGIOSGA014583-PA

Length

1918

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26523778..26525695

Sequence Coding Region

26525447..26525695,26525228..26525368,26525062..26525133,26524856..26524954,26524658..26524714
,26524464..26524565,26524261..26524338,26524031..26524171,26523778..26523930

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26523778..26525695 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26523778..26525695 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCAATCCCATGATCAAAAGCCAGCCAGTGTTGGCACTGCCTTCAAATCTAATGCCATGTTTGGTTACATCCAAGAAGCATCCATGTTCTTCATTGTGTGTGACATACATCAGTAAGCGTGAACTTGTTGAAGTCGTTGATGGACTTGTCGGGGTAATGATGACATCATCGAACCGTGAAAAGCCAGACATTGAATCTGGTTACGACGATTCGTCTGATGAAGATTCCACTGAGAATTCTCGTGCAGAAATTTGTCCTTCTGCCTTATGTTTCTTCGACCAAATCGTAGCTAGTGCGCAAGACAAGAAGGTTGTGTTGTTTCTAGACTATGATGGCACACTTTCTCCTATTGTGAATGATCCAGAGAAAGCATTCATGTCCTCTGAGATGCGTGCTACTGTGAAAAGTGTTGCAAAGCACTTCCCTACAGCAATAGTTAGTGGGAGATCCCGCGACAAGGTGTTTGATTTTGTCAAGCTGACTGAGATATACTATGCAGGGAGTCATGGTATGGACATACTAGCATCTTTTGCAGATTCAGACAGTACCATAGAAAAGACCAAAGAAACCAAGCTTTTTCAACCTGCAAATGAGTTTCTGACTATGATAACTGAGGTTTCCAAATCCCTGATAGAGGTCACTAAAGCGATTAAGGGTGCAACAGTTGAGAACAACAAGTTTTGCGTTTCTGTTCATTATCGTAATGTCGACAAGAAGAACTGGAAGTTGGTCGCACAGGTTGTCAACAATGTTCTAAAAGATTTTCCTAGTCTTAAAGTATCCACTGGACGGAAGGTTTTAGAGGTTCGTCCAATGATCAACTGGGACAAGGGAAAAGCCGTCGAGTTTTTGCTTCGATCGCTTGGGCTAGATGATTCTGAAACTGTTCTTCCTATCTATATTGGGGATGATAAAACGGATGAAGATGCATTCAAGGTGCTTCGCGAGCGAAAGAATGGATGTGGGATTCTTGTTTCGCAGGTGCCCAAGAAGTCTGAAGCCTTTTTCATGCTGAGAGGCCCATCAGAAGTAGTGATCCTTCCTGTCATGCTTAACTTTTTTGCTGCCCTTCTGATTATGCCTAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MTNPMIKSQPVLALPSNLMPCLVTSKKHPCSSLCVTYISKRELVEVVDGLVGVMMTSSNREKPDIESGYDDSSDEDSTENSRAEICPSALCFFDQIVASAQDKKVVLFLDYDGTLSPIVNDPEKAFMSSEMRATVKSVAKHFPTAIVSGRSRDKVFDFVKLTEIYYAGSHGMDILASFADSDSTIEKTKETKLFQPANEFLTMITEVSKSLIEVTKAIKGATVENNKFCVSVHYRNVDKKNWKLVAQVVNNVLKDFPSLKVSTGRKVLEVRPMINWDKGKAVEFLLRSLGLDDSETVLPIYIGDDKTDEDAFKVLRERKNGCGILVSQVPKKSEAFFMLRGPSEVVILPVMLNFFAALLIMPS</aaseq>

Gene Sequence

<dnaseqindica>1..249#328..468#563..634#742..840#982..1038#1131..1232#1358..1435#1525..1665#1766..1918#ATGACCAATCCCATGATCAAAAGCCAGCCAGTGTTGGCACTGCCTTCAAATCTAATGCCATGTTTGGTTACATCCAAGAAGCATCCATGTTCTTCATTGTGTGTGACATACATCAGTAAGCGTGAACTTGTTGAAGTCGTTGATGGACTTGTCGGGGTAATGATGACATCATCGAACCGTGAAAAGCCAGACATTGAATCTGGTTACGACGATTCGTCTGATGAAGATTCCACTGAGAATTCTCGTGCAGTAAGTTGCTTCTTTCGGTTTTCTGTTATTCTCTTTGTTTTCTACAAAGGATTTTAATATGTTTATCTTTTATATCAGGAAATTTGTCCTTCTGCCTTATGTTTCTTCGACCAAATCGTAGCTAGTGCGCAAGACAAGAAGGTTGTGTTGTTTCTAGACTATGATGGCACACTTTCTCCTATTGTGAATGATCCAGAGAAAGCATTCATGTCCTCTGAGGTAAGCCAGCTGGTGTAAGATAAAATATGTATTGAAACATTGCTTTATGTATGTGCCATTTACTAATATTCTCAATCTGAATACCTTCCTTCAGATGCGTGCTACTGTGAAAAGTGTTGCAAAGCACTTCCCTACAGCAATAGTTAGTGGGAGATCCCGCGACAAGGTCTGAATATATTTTTTACATGTATTGGTCTTCACGTTTTAGTGTGACAATTATGTCAGTATGAAAATCACATATCTGATGTTTGATGCTGGCCTCTCCATGTCCAGGTGTTTGATTTTGTCAAGCTGACTGAGATATACTATGCAGGGAGTCATGGTATGGACATACTAGCATCTTTTGCAGATTCAGACAGTACCATAGAAAAGGTGAGTAGTTGTAGGATCATTTTAGGTTTCAGGCATGAATACATATATTTGTTGCTCTTACATTTTTAACGATTGAATTCATTACATACACGTCCCTTCATGTTTCATCATTTGAAAATATTGTTGAGCTCTCTATTGCAGACCAAAGAAACCAAGCTTTTTCAACCTGCAAATGAGTTTCTGACTATGATAACTGAGGTACTCTTTGTTTCAGTCATCAGAAAGCAATAAATCTGGATGGATGATATTGAAAATATTACTCTATATGCTAATGTGCCTGTGTACAATAGGTTTCCAAATCCCTGATAGAGGTCACTAAAGCGATTAAGGGTGCAACAGTTGAGAACAACAAGTTTTGCGTTTCTGTTCATTATCGTAATGTCGACAAGAAGGTTTAGTTGGAACATTCTTGCCTCCCTTGTGGCCTTGTCGCTTTGCAACAATTGCAAGTTTTCTCCTATAAGTTTTTTTTTCTCGAATACAGTTTCTCATATAATTTTCACCTGTTTCCCTCCAGAACTGGAAGTTGGTCGCACAGGTTGTCAACAATGTTCTAAAAGATTTTCCTAGTCTTAAAGTATCCACTGGACGGAAGGTAGAAGGATTAAAAAGATAGCAATGTAATATACTGTTCCTAATAGGCGGTTCATCATTTGTATGCTAAACAGGTATGCTATTATGCAGGTTTTAGAGGTTCGTCCAATGATCAACTGGGACAAGGGAAAAGCCGTCGAGTTTTTGCTTCGATCGCTTGGGCTAGATGATTCTGAAACTGTTCTTCCTATCTATATTGGGGATGATAAAACGGATGAAGATGCATTCAAGGTCACCTTTCTTCAGAAATTGCATACCACATTTTAGCTCCATCTTACTTCGAGCGTTAGTGAACTCAATTATTATTCCTTTTTTTTTATTATACGACCAGGTGCTTCGCGAGCGAAAGAATGGATGTGGGATTCTTGTTTCGCAGGTGCCCAAGAAGTCTGAAGCCTTTTTCATGCTGAGAGGCCCATCAGAAGTAGTGATCCTTCCTGTCATGCTTAACTTTTTTGCTGCCCTTCTGATTATGCCTAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014583