BGIOSGA014643

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Revision as of 04:01, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014643| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014643, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA014643

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014643, complete gene.

LocusTag

OS04G0538100

Ensembl Transcript ID

BGIOSGA014643-TA

Ensembl Protein ID

BGIOSGA014643-PA

Length

3678

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25680439..25684116

Sequence Coding Region

25683888..25684116,25681585..25682993,25680701..25681213,25680439..25680612

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25680439..25684116 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25680439..25684116 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCAACCGAGGCGCCAGTGCTGCGGGCCGCCGGGCCCGCGCGCCGGCCGGCCGTCTCCGGCGCGTCCGCCTCGCGCCTCCTCCTCGGCCACCGCCCCTTCCCCGCGCCGTCGCCCGCCTCGTCCCGCTCCCGCTACGCCGCGGCGGTGGCGGCTGGCGTCCGCCCGCGCCCGCGCCCGCGCCCGCGCAGGCCGCGCCTATCGGTCGTCGCCATGGCCGGCAATGATCGGCAAGTGCCTTTGATGGATTACCGCAATATTGGTATCATGGCACATATAGATGCAGGAAAGACAACAACTACAGAACGTGTTTTGTACTACACAGGAAGGAACTACAAAATTGGTGAGGTCCACGAGGGAACAGCTACGATGGACTGGATGGAGCAAGAACAAGAGAGAGGAATAACCATTACGTCTGCAGCAACTACTGCTTTCTGGAACAAACATAGAATCAACATCATCGATACTCCTGGGCATGTCGACTTCACTCTTGAGGTTGAGCGTGCTCTCAGGGTGTTGGATGGAGCTATATGTCTATTTGACAGTGTTGCTGGGGTAGAACCACAATCTGAAACCGTGTGGCGCCAAGCTGATAAATATGGGGTTCCGAGAATATGTTTTGTAAACAAAATGGACCGCCTTGGTGCTAACTTCTTTAGAACTAGAGACATGATAATCGCAAATTTAGGTGCGAAGCCTTTGGTAATACAGTTGCCCATTGGTTCAGAGGACAATTTCCAAGGAGTTATCGATCTAGTCAAGATGAAGGCTATTGTATGGACAGGAGAGGAACTTGGTGCAAAATTTTCTTATCAGGATATACCTGCTGATCTCCAAGAGATGGCTGATGACTACAAAGCTCAGATGATGGAAACTATTGTAGAGTTGGATGATGATGTTATGGAGACTTATCTAGAAGGTGGCGAAATAGACGAGGAAACTGTCAAGAGATTGATCCGAAAGGGAACAATATCTGCCAGCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCAACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAAGGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCCATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAATEAPVLRAAGPARRPAVSGASASRLLLGHRPFPAPSPASSRSRYAAAVAAGVRPRPRPRPRRPRLSVVAMAGNDRQVPLMDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIIANLGAKPLVIQLPIGSEDNFQGVIDLVKMKAIVWTGEELGAKFSYQDIPADLQEMADDYKAQMMETIVELDDDVMETYLEGGEIDEETVKRLIRKGTISASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPEDPELILERKPSDDEPFSGLAFKIMTDPFVGSLTFVRIYSGKLVAGSYVLNANKDKKERIGRLLEMHANSKEDITVAVAGDIVALAGLKDTITGETLSDPDKPVVLERMEFPDPVIKVAIEPKTKADADKMATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRLKREFRVEANVGAPQVNYRESISKISEVQYVHKKQSGGSGQFADIIVRFEPLEAGSGYEFKSEIKGGAVPKEYVPGVMKGIEESLPNGVLAGYPVVDLRAVLVDGSYHDVDSSVLAFQIAARGAFREGLRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPGGLKVVDAFVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQNELSAAKQEEASTA</aaseq>

Gene Sequence

<dnaseqindica>1..229#1124..2532#2904..3416#3505..3678#ATGGCAGCAACCGAGGCGCCAGTGCTGCGGGCCGCCGGGCCCGCGCGCCGGCCGGCCGTCTCCGGCGCGTCCGCCTCGCGCCTCCTCCTCGGCCACCGCCCCTTCCCCGCGCCGTCGCCCGCCTCGTCCCGCTCCCGCTACGCCGCGGCGGTGGCGGCTGGCGTCCGCCCGCGCCCGCGCCCGCGCCCGCGCAGGCCGCGCCTATCGGTCGTCGCCATGGCCGGCAATGGTGAGCGAGCCACAGTCTGGCGTTACTTGCTGTGTTTGTTCCAGTTCTTTTTTTTTTTGACCCTGGACGTGGGGATGATGGTCTGCAGTGTAAAGTGTGCACTGACGGTGTTCGATGAAATGGGCCAAAAGGATTATCTTTCGTTCTTTCTCAGAGTTGAAGATGATTATCACGCAGTATTATAGAATTTAGGAGTGTTCTATTGGATAGTGTATTAGTTGATCTTTTGCTACTACTAGTTTTGCAAAAGAGAAGGTTGAGGCAGCATGCTGGCGACCGTGCTTAGGATTGTTGATGGGCTGCTGCTTTGTTAGATAAACCATTGATGAAGTTGCTTCTAACTAAAGAGTAATTGGTTTAGAAGCTCTTCTGGAGCTCATAACTACTCATGGCATTGATTTCTGTAAATGGTTGTTGTAGTACTAGAATATCTTCCCAATAGAACAAACTGAGAAGCAAGGAATAGAGAGATGCGAGGATATGGCTCCATAAACATCTAAAATAGAATATACACATAGCTATGTAATTAAATGAATGTCCTCTCCATGTTTGTGTAGTTAGCAAAAAGAATATGGTCGATGGCATTTTGCTCTTACACAATAGACTTGTATGCATGTAACTTATCTTGTCGATGCAACATATTGAATAAATGCTTTACTTTCTTTTAATTGCTGTCTTTTACGCATCTCCTAATGAATATTGTGCAGAAGTGAGTTTCTATTTTGCAGTAAAGTTTGTCATTAAGTTAATTACATAAGATCTGGAAGCCAAGTCTCTTGGATTCCTTTTCACTTTTCATTTTGTAGATTCACAGTTTTCAACCAAAATAAATTACATTGCTTTCTTCAACCTATCGATTACATTAATATTGACATATTTTACTTTTGTATACAGATCGGCAAGTGCCTTTGATGGATTACCGCAATATTGGTATCATGGCACATATAGATGCAGGAAAGACAACAACTACAGAACGTGTTTTGTACTACACAGGAAGGAACTACAAAATTGGTGAGGTCCACGAGGGAACAGCTACGATGGACTGGATGGAGCAAGAACAAGAGAGAGGAATAACCATTACGTCTGCAGCAACTACTGCTTTCTGGAACAAACATAGAATCAACATCATCGATACTCCTGGGCATGTCGACTTCACTCTTGAGGTTGAGCGTGCTCTCAGGGTGTTGGATGGAGCTATATGTCTATTTGACAGTGTTGCTGGGGTAGAACCACAATCTGAAACCGTGTGGCGCCAAGCTGATAAATATGGGGTTCCGAGAATATGTTTTGTAAACAAAATGGACCGCCTTGGTGCTAACTTCTTTAGAACTAGAGACATGATAATCGCAAATTTAGGTGCGAAGCCTTTGGTAATACAGTTGCCCATTGGTTCAGAGGACAATTTCCAAGGAGTTATCGATCTAGTCAAGATGAAGGCTATTGTATGGACAGGAGAGGAACTTGGTGCAAAATTTTCTTATCAGGATATACCTGCTGATCTCCAAGAGATGGCTGATGACTACAAAGCTCAGATGATGGAAACTATTGTAGAGTTGGATGATGATGTTATGGAGACTTATCTAGAAGGTGGCGAAATAGACGAGGAAACTGTCAAGAGATTGATCCGAAAGGGAACAATATCTGCCAGCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCAACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAAGGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCCATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTAAGTATTCTGATTAGCTTTATTGTTTCTGTACATGCCCCACTCCCCCACGTAATTACTCTACATTCATGCGCAAATCATATTGAACGGTTGTTATTGTGCTTATAAACCACACCATTTCCTATGTGCTTAGATTTTCCCTTTTCCTCAGCTAAGCTAAGAGAAACTACCTGATAAGATAGTAAAATGTTCTTTTGGTTAGCTTATTTATTTATGTTCTATGACTTAATAGCTCGGTTCTTCAATTATGCCACTTATCTCACCAAATAATCTTATTAAAGTCCTAGGAATAGAAGCATTCCACTAGTTTTTTGTATTCATAATTGCACCCAAGAGTTTTAACTTGAGCTCTTAAATATGCAACTGCACAGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTAGCACAAAATATATCCTTTCCCTTTATTAGCCATACAGTTGAAATGTGGCCTGAGACTTACAGTGGTATATTATTATTTGATGCAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014643