BGIOSGA014717

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Revision as of 04:02, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014717, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA014717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014717, complete gene.

LocusTag

OSJNBB0070J16.10

Ensembl Transcript ID

BGIOSGA014717-TA

Ensembl Protein ID

BGIOSGA014717-PA

Length

3694

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24427558..24431251

Sequence Coding Region

24431176..24431251,24430991..24431031,24430704..24430773,24430468..24430616,24430208..24430303
,24429722..24429792,24429240..24429301,24428854..24428917,24428668..24428752
,24428430..24428556,24428280..24428350,24428137..24428197,24427939..24428036
,24427558..24427851

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24427558..24431251 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24427558..24431251 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGCGTTATTGGGGGCAAGTTTAAGCTCGGGAAGAAGATCGGGAGTGGATCCTTCGGGGAGCTCTATCTCGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAACTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGACCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MERVIGGKFKLGKKIGSGSFGELYLAVNIQNSEEVAVKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKLSLKSVLMLADQMIARVEYMHTRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDRISEKKMLTPVEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKKLFRDLFIREGYQLDYVFDWTMLKYPQIRDNKLRPSGKTSGLVGRSAERTERTTGEALARRTGSGSGRNGEPTKHRTLLDSLMSSKATADTDKTRPTSLSRNGSTSRRAVVSSSKPNCGDPSDTNRTSRLFSSSSSRPSAAQRALQSAGAELRSSSLSKTRKSSRDDPTIRSFEMLSLSADRRK</aaseq>

Gene Sequence

<dnaseqindica>1..76#221..261#479..548#636..784#949..1044#1460..1530#1951..2012#2335..2398#2500..2584#2696..2822#2902..2972#3055..3115#3216..3313#3401..3694#ATGGAGCGCGTTATTGGGGGCAAGTTTAAGCTCGGGAAGAAGATCGGGAGTGGATCCTTCGGGGAGCTCTATCTCGGTACGTTTGGCGATGTAGTGATGCTGTGTTTATGTTTTGGAGTAAATGATTGGGTGTTTGTCTGCGCAATTCCATGTTGCTGTTTTTGATGTCCAAAAGCTCCATTTCACATGTTCATGACGGAATTGTTTGATTTGTTTGCAGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGTATGTGATGTGCAGTTCAATACTAGCATGTTGACGCGTTTTTAGCGCCTGTTTGTATCAGTCTGGATGACATGATTGGAGTTAGCTCACCTGTCTAATTTCAGACTTGCAGTGCTATATTGTGTCATGACAGTCAATTCTGCATTTGCCAGATAGCATTAGGGATGCAAGACAGCTTGCTGACCTATCTTGTGTTGTGTGTTGAACTTTTTATTAGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAAGTAAGTATAAGTGTATAACGATAGAAGAAGTTGGTTAGTTCATTCATTCAGGCATTTTACTGATTTTATTTTTTTCCCAATGTTTAGCTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGGTGAGTCTGCCTTGTTATGCTATCATCTGTGTGTTCATTTTGATCATTATGCAATCACATGCCAAAGGACATAATATAGAGCCAAAAAGGAAATGATTTCTTCATTCTGCATGTGGTTAGTTTTTTCAATCAAATGTAACATGCCCTCCTTGCATTTTATACAGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTGTATAATCTTGTTGTTACTATTACTATTGTTATTACTATTATCCAGCTCCAGCAGAAGGATGTACATGCTATATGGATGTGCGGGACATTCATGACATTCACCCCACGCTTGAGATTTTGTGCAAGTGCTACCTATAAAACACTCCTACTCCTAGAAGCATTCATGTTCTGAACAGTAATTGTTGTATAACCTTGTAGTTATTTCAACTGCTTTATAGGTAGTACAGTATAGTTCTTTTGAAGAGATTAATTGTTACATACTTACATTTCTGATGTATCGTTGCAATTGGTTTGCACCATTAGATGAATATGTCTGTCCATTTGTTTTGGCAGTTTAGTGCTGAATGCAATACATATTCAGTTTGCTCACAAAGATAGCATCTAATCACAGGAAAGCACTCTCCATCACAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGTAAAATACAATCTGTTCTTATACTAGTTAAATGCTTGTGCTTTGCTATGAATAATGTGAATTATATGCATGCACTCGTCCCTGTAGATAAACTTGATTTTAGGGATGAAATAGCTAGCGACCTGTGACAGTTTTTCTGGAGGTCAGGGTAGAAGACCCGCCTCTTGCCAGAGAGCTGTTTGACCACGAATCTTTATTAGTGAATACTAATGAGTGATGTTAACTACTGAAAATACTATTCGAAGGATCAGCGAGAATTTATGTTTGATTCATTTTGACAAAAAGAAAAACACTCCTACTGTTTTGTGAGTTGTCGTTGAGTGTTGACTTGTTTCCATTTCCACTTATGGTCATTTCTTAGTTTCTTACTCTGTGGTTCTGCATTTGAAAGCTAAATCTCTTTTCTCTGTACTGCTACAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGGTGAGTTTATGGCCTGCAAATACGTGTATTATATATCTATTGCTGTATCATCATCATGTGAAAAAAATAAATAATAGAAGCCAAGGGGAATAGTAAGGAAGAAAGACAAACCAGTGTTTACTGAATATGTTTAAAGTATGCCAACACTAGTAGTCTTCAAAAGCTAAAAAAGTACCACTTTACAGCCAATCAATCTATTGAACCCTATATTCAATTATTCATCCATGAATCTGAAAACCTTAACGGAAAAATTATGGTTAAAGATTGATGGATCATGGATGATACTTCCCCTGACTTGACCTCTTTCCTTTTCTTCTTCCAGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGGTGCGATATATAATTATACTCCACTAAATTTTCAAGTAACAGTTAAATTATTATTTTCTTGGGCACCTTTACATATTCTTTTACCATCTTGGATGTGTCAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTACTTTGTTTCTTAGATCAAGGGACAATGCAATAAAGAAGTCCCATTACTTTTTTTTCCCCAAAATGTAGAATGAATTGTTTATCAGATTTTCTTCACTACTTCAAACAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGTCTGCTTATTGCCGCATAATTATATAACTGCTAGTTCCTTATGTCTGTACTTTTGACATAACTTCTGCATGCTTTCAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGAGTATGTATATTATTTATTTTACGCAAACCCTTTATAAGCGATGCATTTCCTAGCATGCATAACTTTTGTTTCTCACTATCAGCCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTTTGTAAATTTCATGTGCATTTGAGGATTGCAATAAGCTTGGGAATACATTGTGCTCCCTACGTGGTACAGGACACCCCTGATAGGTTCTCTGGTGCAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTGTAAGGAGTCGATGCATTATTCTGAAACTACAATCAATTCCTTCAGTGATAACAAAAGAGCTTACTATCCTGTAATGCGTTCTGCAGACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014717

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014717&oldid=63611"