BGIOSGA014801

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Revision as of 04:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014801| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014801, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014801

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014801, complete gene.

LocusTag

OSJNBA0067K08.12

Ensembl Transcript ID

BGIOSGA014801-TA

Ensembl Protein ID

BGIOSGA014801-PA

Length

5612

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23413111..23418722

Sequence Coding Region

23418148..23418722,23417721..23418033,23417655..23417664,23417479..23417624,23417283..23417371
,23417111..23417203,23416488..23416614,23415909..23415973,23415655..23415826
,23414828..23415028,23414679..23414726,23414447..23414593,23413685..23413767
,23413298..23413413,23413111..23413196

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23413111..23418722 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23413111..23418722 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGAGGGCGATCATTAGGAGAAGGAAGTATGCTCTGGAGCATACTAATATCCCTGTTTTATTACGACATTCATCTATTTCTACTTTTGGGCAAGAAAAGTTTGGATGTGAAATTGAGCAAAGCACTGCATCTCAAAACTCAAGAGAATCAAACCATGAGAAGGCACAATACATCTTAAGGAAACAAGGACTTTTGGGCCTTAGTATCCTGTGTCACCCAACTCGTGGTGCTTCACTTGCTTCTTATGAATCTAAACCACAGACTTTTGGTTTCCCCTTGGGAGCCAGGTATTTCCTACAGTCAGTACGCCCAACATCAAGCACTGCTGGGCAGCCTAAAGTTGGTATTCTGGACGAGCGGAGTGAGAACCAGAACCAGAATCAGGGGAAAAAGGAGGCATCCCCAGAAGAGTGTGATCAGGCGGTGGAAGGCTTAAGCACTGCAAAAGCTAAAGCTAAAGCTAAGCTGGTGCAGGAAGTACAAAAGTCTGACCAGTCAATCATACATAAATTTTGGGCAATACTTCTAGGTATTGGACCTGCTCTGCGTGCTGTTGCTTCAATGAGCAGGGCTGACTGGGCTGCAAAATTGAAGCATTGGAAGGATGAGTTTGTTTCTACACTGCAGCATTATTGGTTGGGAACTAAGCTGCTGTGGGCAGATGTTAGGATTTCATCTAGATTGTTAGTGAAACTTGCTGGTGGAAAGAGCCTAACAAGAAGAGAGAGGCAACAGCTTACACGCACAACAGCTGATTTGTTTAGGCTTGTACCTTTTGCTGTGTTCATCATTGTTCCCTTCATGGAATTTTTACTACCAGTCTTCCTCAAGATGTTCCCTAACATGTTGCCATCGACTTTCCAGGACAAGATGAAGGAAGAGATTGACTCAGGAGGCATTGAAAAGGAAATTGAAAGCAAGGATGGAATATGCAAGATTTTTACAAGATACTGCAAAAGAAATGGCAAGGAAGTGCAGACGTCACGTAGTGGAGAAATGAAACAGACAGCTGAAGATCTGGATGAATTTTTGAACAAGGTTAGGAAAGGTGGGCATGTCTCAAATGAAGAAATTTTGAGCTTTGCAAAGCTGTTTAATGATGAACTGACTTTGGATAACATGAACAGAGCACGGTTGGTAAATATGTGTAAATATATGGGGATCCAACCTTTTGGTACAGACCACTACCTGACATTCATGCTTCGGAAGAAATTGCAAGAAATTAAGAATGATGATAAGATGATCCAGGCTGAGGGCGTGGAGTCTCTTTCTGAGGAGGAGCTTCGACAAGCATGTCGAGAACGTGGCCATCTTGGTTTGTTGTCAACAGAGGAGATGCAAAATCAGCTCAGAGACTGGTTGGATTTGTCACTTAATCATTCTGTGCCATCATCTCTTCTAATACTATCAAGAGCTTTTACCATGTCTGGGAAAATGAAGCCCGAGGAGGCTGTTGTAGCAACATTATCTTCTCTTCCAGATGAAGTTGTAGATACTGTTGGGACGGTTCTTCCTTCAGAAGATTCTGTGTCCGACAGGAAGCGGAAATTGGAATTCCTGGAAATGCAGGAAGAACTTATCAAGGAAGAGGAGAAAAGGCAAGAGAAAGAAGACAAGGCAAAACTTGAGGTACCAAAGGCAACTGAAGAAGATGTGGCTTTGAAAGAAATGACTGAGCCTACTGCTAGGGAAGAAAAGGAACTAAAGAAAGCAAAAGTTGAGCATGACAGGAAGGAGCAGCTTTGTGATATCAGCCAAGCATTGGCCGTGCTTGCATCTGCTTCTTCTGTTGCCAAGGAACGTCAAGAGTTTCTGAATCTTGTCAATAAAGAGATAGAACTATATAACACCATGCTGGAAAAGGAGGGTACAGAAGGTGAAGAAGAAGCTAGGAGAGCATACAAGGCTGCAAGAGAGGAATCAGACCATGCTGCAGAGATAGCTGCAGGAGAAAAGGTCTCTTCAGCATTAATAGAGAGGGTTGATGCAATGCTTCAGAAATTAGAGAAAGAGATTGATGATGTTGATGCACGAATAGGCAACCGCTGGCAGCTGCTTGATAGTGACCGTGATGGCAAAGTTACCCCTGACGAGGTAGCAGCTGCAGCAAATTATCTCAAAGACACTATAGGGAAGGAAGGCGTCCAAGAGCTTATTAGCAATCTTTCTAAAGACAAAGATGGAAAGATCCTCGTTGAAGACATTGTGAAGCTGGCATCACAAACGGGAGAAAGCAACGAACAAGAAGAAACCCCACGGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MASRAIIRRRKYALEHTNIPVLLRHSSISTFGQEKFGCEIEQSTASQNSRESNHEKAQYILRKQGLLGLSILCHPTRGASLASYESKPQTFGFPLGARYFLQSVRPTSSTAGQPKVGILDERSENQNQNQGKKEASPEECDQAVEGLSTAKAKAKAKLVQEVQKSDQSIIHKFWAILLGIGPALRAVASMSRADWAAKLKHWKDEFVSTLQHYWLGTKLLWADVRISSRLLVKLAGGKSLTRRERQQLTRTTADLFRLVPFAVFIIVPFMEFLLPVFLKMFPNMLPSTFQDKMKEEIDSGGIEKEIESKDGICKIFTRYCKRNGKEVQTSRSGEMKQTAEDLDEFLNKVRKGGHVSNEEILSFAKLFNDELTLDNMNRARLVNMCKYMGIQPFGTDHYLTFMLRKKLQEIKNDDKMIQAEGVESLSEEELRQACRERGHLGLLSTEEMQNQLRDWLDLSLNHSVPSSLLILSRAFTMSGKMKPEEAVVATLSSLPDEVVDTVGTVLPSEDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAKLEVPKATEEDVALKEMTEPTAREEKELKKAKVEHDRKEQLCDISQALAVLASASSVAKERQEFLNLVNKEIELYNTMLEKEGTEGEEEARRAYKAAREESDHAAEIAAGEKVSSALIERVDAMLQKLEKEIDDVDARIGNRWQLLDSDRDGKVTPDEVAAAANYLKDTIGKEGVQELISNLSKDKDGKILVEDIVKLASQTGESNEQEETPRQ</aaseq>

Gene Sequence

<dnaseqindica>1..575#690..1002#1059..1068#1099..1244#1352..1440#1520..1612#2109..2235#2750..2814#2897..3068#3695..3895#3997..4044#4130..4276#4956..5038#5310..5425#5527..5612#ATGGCCTCGAGGGCGATCATTAGGAGAAGGAAGTATGCTCTGGAGCATACTAATATCCCTGTTTTATTACGACATTCATCTATTTCTACTTTTGGGCAAGAAAAGTTTGGATGTGAAATTGAGCAAAGCACTGCATCTCAAAACTCAAGAGAATCAAACCATGAGAAGGCACAATACATCTTAAGGAAACAAGGACTTTTGGGCCTTAGTATCCTGTGTCACCCAACTCGTGGTGCTTCACTTGCTTCTTATGAATCTAAACCACAGACTTTTGGTTTCCCCTTGGGAGCCAGGTATTTCCTACAGTCAGTACGCCCAACATCAAGCACTGCTGGGCAGCCTAAAGTTGGTATTCTGGACGAGCGGAGTGAGAACCAGAACCAGAATCAGGGGAAAAAGGAGGCATCCCCAGAAGAGTGTGATCAGGCGGTGGAAGGCTTAAGCACTGCAAAAGCTAAAGCTAAAGCTAAGCTGGTGCAGGAAGTACAAAAGTCTGACCAGTCAATCATACATAAATTTTGGGCAATACTTCTAGGTATTGGACCTGCTCTGCGTGCTGTTGCTTCAATGAGCAGGTCTCAGTTCCCTTCAGTATATTGAAGTATATTTGCAATTGCTGTCTTGCCCCTTTCCATGGATTATACATTCATATCCAATGTTTTGATTTATATTTATCTTGTGAATCGAAGGGCTGACTGGGCTGCAAAATTGAAGCATTGGAAGGATGAGTTTGTTTCTACACTGCAGCATTATTGGTTGGGAACTAAGCTGCTGTGGGCAGATGTTAGGATTTCATCTAGATTGTTAGTGAAACTTGCTGGTGGAAAGAGCCTAACAAGAAGAGAGAGGCAACAGCTTACACGCACAACAGCTGATTTGTTTAGGCTTGTACCTTTTGCTGTGTTCATCATTGTTCCCTTCATGGAATTTTTACTACCAGTCTTCCTCAAGATGTTCCCTAACATGTTGCCATCGACTTTCCAGGACAAGATGAAGGAAGAGGTACTGACCAAGACATGTTATGATATCTTGCCACTGTATTTGCTAAATACAAACAGATTGACTCAGGTCAACATTTTTTTTTTTTGATACGTGCAGGAGGCATTGAAAAGGAAATTGAAAGCAAGGATGGAATATGCAAGATTTTTACAAGATACTGCAAAAGAAATGGCAAGGAAGTGCAGACGTCACGTAGTGGAGAAATGAAACAGACAGCTGAAGATCTGGATGAATTTTTGAACAAGGTTTTGGGTTCATACATGTTTTGTTTGTTACCTCAAGTTGAATACATAGATCATTAAGTGTTTGTTTTATTGATTTCCTAGTAATCTATTCTTAACTTTGTAACTAGGTTAGGAAAGGTGGGCATGTCTCAAATGAAGAAATTTTGAGCTTTGCAAAGCTGTTTAATGATGAACTGACTTTGGATAACATGAACAGGTTGATGTTTCTTGAACATCTAGCTTAGCCCTAGCCCTTGGTTTTCACATCTTTCTGATCAGTCCTTTTTTGCCTGCAGAGCACGGTTGGTAAATATGTGTAAATATATGGGGATCCAACCTTTTGGTACAGACCACTACCTGACATTCATGCTTCGGAAGAAATTGCAAGAGTATGCCCACCGGTTGCTTTCTGATGTAGATGCTGTGTGCAGATATAGATGTCAGATAGTTAGATGATGAGAAAAAAATACATGGTGGATGATGTAGAATGATCCTTTTACAAATCTCCAATTCAACTTGAGTGCTAATTAATCTTCAACATTGTATACGTTTTTGTTTTTGACACATCTAATACTGTTTTGGCCATTTTACATCTTAGAAGATCGACAGGCAATTGAAAATTTTCCAGAAAGACAAATAGAGATTTAACTTTTGAGCGGTTTTGTAGTTCTCACTGCATCATCTGAAATTGAGAACAATGTGTCCAGAGTAAAATCTTCTCTAGTGTACGGTTGTAAAATAATGGCGCCATGATGAATCACAGAGGAACAGTTAATGTTACACCAAAATCAATCCTCTTTCAAGTTTGAAAACAGCGTCATGTTCTTATGCAAACATTTTTTTGGGTAGTTAACCGTAGTAACTCTTTTATATCTTTATTTGCAGAATTAAGAATGATGATAAGATGATCCAGGCTGAGGGCGTGGAGTCTCTTTCTGAGGAGGAGCTTCGACAAGCATGTCGAGAACGTGGCCATCTTGGTTTGTTGTCAACAGAGGAGATGCAAAATCAGGTTTGTTTGCCTTGAAATTGTTGGTGGGACATCTGCATTGATGAGTAGGTAATGGTAGTAAATACAGCACATCAGATCCCTGTTGTTGGATGCTTTTAATATACTTTTATTGTATTTCCAGTTTAAAATAGTTCCGGTATATTCCCTGTGATTTTTTCGTTTTTACTTATGACTAACCCAGTTATCTATTGCACTTTTTTTATAACCATATATTCTAAGTGTGTTAGTAGAACTGGTACTGTTACTCTATTGAAAGAGAAAAGGTCAATTGGGCACCATGCTTTGTGCTTCTTTGTCCAATGCTTTGTTTGCTAAATTGTGTCAATGCATATTGACACAGCAATTAAAAACTTCCTAGAACTGTTGTAGAAGATGATTTTAGTTCTCTGTAGTGATTTAAGGCACATTTCTTTGCAGGAACTGTATCAGTATTTCAGCTATGTTAAATTAATATCAAATTATCTAAAAATGTTTCAGTTATGTAAGAATTTAAACATTTAATTTTAATGTTCAGCTCAGAGACTGGTTGGATTTGTCACTTAATCATTCTGTGCCATCATCTCTTCTAATACTATCAAGGTAATTCTGGATTTTTGGTGATAGTTGCCCTTGGGTTCAGTTCATCTATTCAAGTTCTCAGTTGTGTTTGAAATACTTCCAGAGCTTTTACCATGTCTGGGAAAATGAAGCCCGAGGAGGCTGTTGTAGCAACATTATCTTCTCTTCCAGATGAAGTTGTAGATACTGTTGGGACGGTTCTTCCTTCAGAAGATTCTGTGTCCGACAGGAAGCGGAAATTGGAATTCCTGGAAATGCAGGAAGAACTTATCAAGGTACTGAAATTTTGATTTGATTAAATTCCATATCTCATTTAATGTATCTGCCACTGGGTATGCCTACCTGACACAATATGTCCTTATTGGCTGTATCACCAAGTCCCCAGCTGCAATGAAGTATCTACCTTACTCCTAGTTTGAAAGTACTTCTGAAGTTAGATATGAATAGAAGTTCAGGGTGACGACCCATAGCTTGTCAACAATTTGTTGTTTTGATTTGATGGTTTTACTTTGAAATACAGAAAAATGATAACTGATGCGCTAGCGTCTCACAATTAGATGCATTGGAACTTGAAATTATGGGCAATGCCATCCTGTAGAAAAAGCATGAGATAAAAATGATGAGACTCCATCTTGCATAATCCTTGGTTATATTGTTTAGCAATGCAGTACAGTTTGAATCTTGATGTGATTAGCTACCAATTTGTGGCTTTCAATATTCCTTGGTTGCCCAAGCCCAATTAATGTGTAAATATGTAATTCACCCGTGTAACTGTAGTTATAATTAGGTTTTGATGATTTGGTGGATTCTACAAGTTCTCTCAGTTCCTCTATTTGATAATCCAACTATGTTGTCAATTATCCGTTGTTGTTAATGCTTCTACATATTGAATGATATTCAGGAAGAGGAGAAAAGGCAAGAGAAAGAAGACAAGGCAAAACTTGAGGTACCAAAGGCAACTGAAGAAGATGTGGCTTTGAAAGAAATGACTGAGCCTACTGCTAGGGAAGAAAAGGAACTAAAGAAAGCAAAAGTTGAGCATGACAGGAAGGAGCAGCTTTGTGATATCAGCCAAGCATTGGCCGTGCTTGCATCTGCTTCTGTATGATCCTAGCATTAAGCTATATTCCTTGCTTTTCTAGAGTAAGCTACATTAAACCATTAATATTCTGTTTCACCTTTTTTTTCCATCTTCTACTGCAGTCTGTTGCCAAGGAACGTCAAGAGTTTCTGAATCTTGTCAATAAAGAGGTATGAGTTGAAGTTGCAGTTAATATTATGTGCTTTCAGTTTGCATATGATAATATTGGATGGTCTCCACTCTTGTGGAACACAGATAGAACTATATAACACCATGCTGGAAAAGGAGGGTACAGAAGGTGAAGAAGAAGCTAGGAGAGCATACAAGGCTGCAAGAGAGGAATCAGACCATGCTGCAGAGATAGCTGCAGGAGAAAAGGTCTCTTCAGCATTAATAGAGAGGGTAAGGAATTCTTTTCTGCATTTAAACCACTACTTGATCTGCCTCTTTTAAAATTACTTTGAAACATCCCTAAACTCAAGATAATCGTGTGATAGTAATTACAAATAGATAACTAACTGCTGGGAAGGTGGGAAGGTGTGAAAGTAGAGGAACTGATTGCTGGCACACAAAGCACTCAACTATGAAAACTTGTGTTGGTTGAGAATAATGCCCACACCCACAGGCAAAAGGCAATTTGTGATCAATTATTCAGTCTCTAGTTAGTTTCACTACTATCTTAGGATCTTAGAAGATTCTCAAATAAAATATACAAATGCCAGTAATCGCTTTTTGTACTCCAGCTTGATACTAACCTGGATTCAACTAGGTCATCACTAATCAGCGGTTCACTCATGAATTATGAGCTCTAATTCTGGTGTTGCTTTATGTCTGTGTCTCAACTGGCTTCTAGCTTCTTTCTCTATGAATGGTGGTTACAGCCTGCACTTGGCCAATTGCATGCCTTTGTTCTGCATTTACTAATTTAAGGATTTTCCTTGATGGACGTAAATTCTCTATTGTTCTGTTGAATTTGTTTCTGTGTGGAATGTGTAATACAGACATTAGATGTGTTGTTTTCTTGTCTTGATCTTTAGTAAATAGCAACTATTTGTTGACGTACTGTTTCGCTGCATTTCAGGTTGATGCAATGCTTCAGAAATTAGAGAAAGAGATTGATGATGTTGATGCACGAATAGGCAACCGCTGGCAGCTGCTTGATAGGTAAATGCTACCTGCATGTGCGTAAATTGTCATGAATCACTTAATCTTAAGGTAGGCTGGGAGGTTGCCTGGTTAGGACTTACAACATGCTAACCCTATGTTGCATACCTGAGCTCTACAAAACTTCAATTAAGATGGCTAAAGCATAATAATTGATCACTAGATCATTGAGGGATAATGGTCTCAATACACGTTGTGGGTAACTAACCAATGACTGGACCTTCCGTTTGTTGGATTTGCCTTGCTCATGAATAACATGATCTCATTGCAGTGACCGTGATGGCAAAGTTACCCCTGACGAGGTAGCAGCTGCAGCAAATTATCTCAAAGACACTATAGGGAAGGAAGGCGTCCAAGAGCTTATTAGCAATCTTTCTAAAGACAAAGGTTCCACTCAGCTTCTCTACCTACTGCGCTGAAAGATAAATGTCCATGTTCATCATTGTGCATTCTAAGCCTTTTTCTGGTTCTCTTTCTATGCCTAACAGATGGAAAGATCCTCGTTGAAGACATTGTGAAGCTGGCATCACAAACGGGAGAAAGCAACGAACAAGAAGAAACCCCACGGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014801