BGIOSGA014848

From RiceWiki
Revision as of 04:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014848| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014848, complete gene.| tag = H0805A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014848

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014848, complete gene.

LocusTag

H0805A05.7

Ensembl Transcript ID

BGIOSGA014848-TA

Ensembl Protein ID

BGIOSGA014848-PA

Length

1807

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22625575..22627381

Sequence Coding Region

22626873..22627381,22626537..22626795,22626271..22626423,22625575..22625958

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22625575..22627381 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22625575..22627381 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCTGAGCAATCTGCCCGACAATGTCTTGCTCGACATCCTCGACAAGCTGGACACGCGGGAGGCCGTGAGATGCAGCGTCCTCTCGAGGCGGTGGAGGCGCGTCCCCGGCATGCTCCCCAACATCAAGCTGGACGTCGACTCCTCCTTCGAGCACGACGACGACGGCTTCACCTCCACGCTATCCGACGCCGCGAGGAACAACTACGCGATGGTGGGCGCGGTGCAGAGCCTCCTGTCGCGCGAGAGCCGGCACGACATCCGCCGCCTGGACCTGAGCTTCTCGAGGGAAGAGTCCGTCGGCATCATCCACGCCATCGACGACACGGTTCGTAGTCTTGTCGGAGAAGTCGTTCTTGGAACGCCCGCACAAGGACAGGGTCAAGCAAGGGAGGCGCCTTCTGCACTGCTTCGACGCCTACCCGCGCGTGTTCGTCGGCCTCACCCGACTGCACCTGGAGTTTGTCACGGTGCACGGGCCTCGCTTCTCCGACTTGATCGCCGCCTCTTTAGCACGATAGATCTCGAGTTCTGCGCCTGTTACACCATCGAGCTGGAGTGGCTCCCGAAGCTGGCAGAGCTATCGATAGCCGTCTGGCCATGGACGTCGCATGAGTACCCGCTGGTGGTTGGCCACGCCCCACGACTTCGGCTGCTAGACCTATCTCACGCCGGTATGGTTAATTCAAAAATTCTCCGGTTGAGCAAGCTACTTGACAATACTACGAGCCTTCAAGAACTGTGGTTGAACTTTGAAACCGAAAAGGTATGGATTCAACTGGAGACCCCAAAACATTTGGCTCCTTTTATGAGGAATTTGACGTTGGTGGATGTCCACCGCATTCATCCAAACTGTGGCATCAATTGGACGCTGTTTCTTTTGGAAGCAGCACCTCTTTTGAAGATACTTAGTATTTCGGCAACGGACCATCTCTGTGTACCCGTTGAGGAAGAGCTGATAAAGAGATTCGTGATCTGCAAGAAGAGCAATATAAACTGGGAACCATCTGATTTCAAGCACTCCAACCTAAGCAAGCTCACCATCCATGGCTTTCAACCTAATAATATATTCATGGGGTACATAAGGCGGGTCATGAAAGCCGCAATGAATTTGGAAGAAATATTACTGCATGACGACTGGTGTGAGGACTGCGAGTCTTATTATCCAGTTGCACGATATCCACAAACAAAAATAGAGAGGGATTTGGTAAAGAAAGCCATAAATGAGGGAATAACATCACCTATCAAAAGCATCCAGTTTTTTCACACATCCGAAGCTGGAACTATCAACATCATTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MDLSNLPDNVLLDILDKLDTREAVRCSVLSRRWRRVPGMLPNIKLDVDSSFEHDDDGFTSTLSDAARNNYAMVGAVQSLLSRESRHDIRRLDLSFSREESVGIIHAIDDTVRSLVGEVVLGTPAQGQGQAREAPSALLRRLPARVRRPHPTAPGVCHGARASLLRLDRRLFSTIDLEFCACYTIELEWLPKLAELSIAVWPWTSHEYPLVVGHAPRLRLLDLSHAGMVNSKILRLSKLLDNTTSLQELWLNFETEKVWIQLETPKHLAPFMRNLTLVDVHRIHPNCGINWTLFLLEAAPLLKILSISATDHLCVPVEEELIKRFVICKKSNINWEPSDFKHSNLSKLTIHGFQPNNIFMGYIRRVMKAAMNLEEILLHDDWCEDCESYYPVARYPQTKIERDLVKKAINEGITSPIKSIQFFHTSEAGTINIID</aaseq>

Gene Sequence

<dnaseqindica>1..509#587..845#959..1111#1424..1807#ATGGACCTGAGCAATCTGCCCGACAATGTCTTGCTCGACATCCTCGACAAGCTGGACACGCGGGAGGCCGTGAGATGCAGCGTCCTCTCGAGGCGGTGGAGGCGCGTCCCCGGCATGCTCCCCAACATCAAGCTGGACGTCGACTCCTCCTTCGAGCACGACGACGACGGCTTCACCTCCACGCTATCCGACGCCGCGAGGAACAACTACGCGATGGTGGGCGCGGTGCAGAGCCTCCTGTCGCGCGAGAGCCGGCACGACATCCGCCGCCTGGACCTGAGCTTCTCGAGGGAAGAGTCCGTCGGCATCATCCACGCCATCGACGACACGGTTCGTAGTCTTGTCGGAGAAGTCGTTCTTGGAACGCCCGCACAAGGACAGGGTCAAGCAAGGGAGGCGCCTTCTGCACTGCTTCGACGCCTACCCGCGCGTGTTCGTCGGCCTCACCCGACTGCACCTGGAGTTTGTCACGGTGCACGGGCCTCGCTTCTCCGACTTGATCGCCGCCTGTGAGCAGCTCATCAAGCTCTGCCTCGTCTACTGCGACTTCGGCAAGGAAACGACGCTGACGATCCGACACGAGCAGCTTTAGCACGATAGATCTCGAGTTCTGCGCCTGTTACACCATCGAGCTGGAGTGGCTCCCGAAGCTGGCAGAGCTATCGATAGCCGTCTGGCCATGGACGTCGCATGAGTACCCGCTGGTGGTTGGCCACGCCCCACGACTTCGGCTGCTAGACCTATCTCACGCCGGTATGGTTAATTCAAAAATTCTCCGGTTGAGCAAGCTACTTGACAATACTACGAGCCTTCAAGAACTGTGGTTGAACTTTGAAACCGAAAAGGTAAGTCGATCATGGCACTGTTAATATCGGTAGCGAACCATTGAAGGAAACATCACTTGAATGTGTATTCATTGTTCGTCACTTCGTCCTTGGTTTCCTTCTATCTTATGCAGGTATGGATTCAACTGGAGACCCCAAAACATTTGGCTCCTTTTATGAGGAATTTGACGTTGGTGGATGTCCACCGCATTCATCCAAACTGTGGCATCAATTGGACGCTGTTTCTTTTGGAAGCAGCACCTCTTTTGAAGATACTTAGTATTTCGGTACTGCCTTCGTTCTTCGTTCTCACTTACTAGACAACACAACAGTAATACACACTCTAACCATAATTCATAAACTTCTAAAATTTTTAGCATCAATAACTCTCAAACGCTTAGTTTAAAAAGGAAATAATGATATGTGTAGATTTGGCTTGAAAGTACTATCATAATATCATATAAATTTATTAGTAGATTTTTTCTAAAACTTATCTAACAGAAAGCTTATTTATAACCATAGGTAGTGTACGGATATTCATCGTTGTCTCTTCTTTCAACTTTTTTTTTGTTAATCACTAAAATGCTATATTTGTGTAGGCAACGGACCATCTCTGTGTACCCGTTGAGGAAGAGCTGATAAAGAGATTCGTGATCTGCAAGAAGAGCAATATAAACTGGGAACCATCTGATTTCAAGCACTCCAACCTAAGCAAGCTCACCATCCATGGCTTTCAACCTAATAATATATTCATGGGGTACATAAGGCGGGTCATGAAAGCCGCAATGAATTTGGAAGAAATATTACTGCATGACGACTGGTGTGAGGACTGCGAGTCTTATTATCCAGTTGCACGATATCCACAAACAAAAATAGAGAGGGATTTGGTAAAGAAAGCCATAAATGAGGGAATAACATCACCTATCAAAAGCATCCAGTTTTTTCACACATCCGAAGCTGGAACTATCAACATCATTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014848