BGIOSGA014896

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Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014896| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014896, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014896

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014896, complete gene.

LocusTag

OSIGBA0135C13.5

Ensembl Transcript ID

BGIOSGA014896-TA

Ensembl Protein ID

BGIOSGA014896-PA

Length

5271

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22106230..22111500

Sequence Coding Region

22111342..22111500,22110852..22110921,22110719..22110777,22110151..22110226,22109828..22109905
,22109631..22109718,22108943..22109267,22107792..22107907,22107506..22107723
,22107016..22107047,22106821..22106923,22106487..22106595,22106230..22106398

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22106230..22111500 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22106230..22111500 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTTGCAGGTGCAATGGTGATGTCAGGTGGCGTGCTCCTTCTCCTCTTGGCTTTCACCTGCGCCGCCTACAATGACGCCGGCGAGCTGCCGGCGATCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTTGGGACGTCCTCGTCGTCATATCAGTTTGAGGGTGCCGCGGCGAAGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTATCCAGACAAAATCACCGACAAGAGCAACGGGGATGGTGCTTGCAATAGCTACCATCTCTACAAGGAAGATGTGCGCATTATGAAGGAGATGGGAATGGATGCATACAGGTTTTCCATCTCGTGGTCAAGAATTCTTCCAAATGGAAGTCTCAGCGGTGGAGTCAACAGAGAAGGCATCAACTACTACAACAATTTGATCAATGAACTATTATCAAAAGAGGTCCAACCATTTGCTACCCTATTCCATTTTGATACACCTCAGGCACTGGAAGATAAATATAAAGGATTTCTTAGCCCTAATATCATAAATGACTATAAGGACTATGCTGAAATATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGAACTTCTGCTCTATGGGCTATGCATCTGGCACCATGGCACCAGGCCGGTGTTCATCCTGGGAGAAGGGAAAATGCAGAGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCACCAACTACTTGCTCATGCAGAAACTGTTCGGCTTTATAAAGAGAAATATCAGTTCACTGAAGAAGCTATCAGGCAGTCGCCGTTCATCCGTGATAATAATTTAAATCGAAGATCTGCAAAGGCTTTACAAAAGGGGAGGATTGGAATAATTTTGAACTCAGAGTGGTTTGTTCCTTTCTCCCAATCCAAATCCAGCAATGATGCTGCAAGACGTGTTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGAAATGGTCAAGGGTGCATTCGATTTTATTGGACTCAACTACTACGCTTCAAGCTATGCTGATAATGATCCTCCATCATATGGCCATAACAACAGCTATAATACTGATTCCCATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTTACATCTACCCTGAAGGGTTGCGTGAATTGTTGCTTCATATTAAGGAAAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAATCAATAATAAGACCATGCGACTCAAGGAGGCCCTGAAGGATGATATCAGGATTGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAATGTGAAGGGGTACTTCGCATGGTCTCTGCTTGACAACTTTGAGTGGTCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTATGATAACGGAATGAAGAGATACCCCAAGAACTCAGCCCGTTGGTTCAAGAAGTTCCTCCGGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVAGAMVMSGGVLLLLLAFTCAAYNDAGELPAISRRSFPKGFIFGTSSSSYQFEGAAAKGGRGPSIWDTFTHQYPDKITDKSNGDGACNSYHLYKEDVRIMKEMGMDAYRFSISWSRILPNGSLSGGVNREGINYYNNLINELLSKEVQPFATLFHFDTPQALEDKYKGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWNFCSMGYASGTMAPGRCSSWEKGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQFTEEAIRQSPFIRDNNLNRRSAKALQKGRIGIILNSEWFVPFSQSKSSNDAARRVLDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSEMVKGAFDFIGLNYYASSYADNDPPSYGHNNSYNTDSHAKITGSRNGIPIGPQAASFWFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLRK</aaseq>

Gene Sequence

<dnaseqindica>1..159#580..649#724..782#1275..1350#1596..1673#1783..1870#2234..2558#3594..3709#3778..3995#4454..4485#4578..4680#4906..5014#5103..5271#ATGGCGGTTGCAGGTGCAATGGTGATGTCAGGTGGCGTGCTCCTTCTCCTCTTGGCTTTCACCTGCGCCGCCTACAATGACGCCGGCGAGCTGCCGGCGATCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTTGGGACGTCCTCGTCGTCATATCAGGTCAGGCATCCAACCTCATCCTTCCTACAAGAAATCGAGAACAATTTCATAAAACTGCCACCGAAAGTAAATTCTGCAAGGACAACAGTCGGAACAGACTGTTCTTTTCGAAGGGGAAACAAAAGTACGAACAGAATGTACAAATGAAACACATGAAAAAGGAACAGGTTAAGATAAATTGTGCAACTAGAGTACCTCATTGATGTAGGTAACCAGAAAATGATGGCACTGAAAAATGCTGAAATTTCTCTAAAGAATAAGAATAATGCTCATATTTGCATGTAGAGAGAAATTCCATGATCCAATACTGTATTCAGTAGTCAATTTAACTGTTTCCTGATTCCTTCTCATCTCATCACGATGTGCTCTGTTTCAGATCTGAAACCTGACAAATTGACTGCTGTTTCACACATGATGCAGTTTGAGGGTGCCGCGGCGAAGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTATCCAGGCATGCTGACTATAAATGGCCAGAAATAAAAGGTCATTACATTATTTTGGATTGACAATTCTCTAATTTGGCAGACAAAATCACCGACAAGAGCAACGGGGATGGTGCTTGCAATAGCTACCATCTCTACAAGGTATTGGCAACTAGCATTGACTTTAGTACTCCCTCCATTCCTAAATGATCTTCATATTTCACCTAAGCAGCAAGACCAAGGAGCAGTTACTATCCCATCTATCCGTGCATGTCGCTTCATCAATTTTGCATGCCGCATGCACCAGCCAATCAGCTATAATGCATTAATTCCACGCATGCAGCAGCTCCCAACTTAACTCTCACAGAGCCAATGCATGCATGTAGTGCTGCTTAATACGAAGCGCCATTATCGTCTACCCATGATTTCTGCTGCTTCCTAATGAAATACGAAGATCAAATTGAAACATTTTACTTTTGGTAATGCGAAGATCATTTAGGAATGGAGGGAGTAAGGGTTTTAATTAAATATACACTCCATGTTTGCCAGTCTTCCTCTGCCACAATCTCTTAAAACTTTAATTCTCTTCTTTAAAATGACTAATTTAGTACTCATCCTGAGGCCTGAGGGCCTGATCACCAAAAAAAATTGCAGGAAGATGTGCGCATTATGAAGGAGATGGGAATGGATGCATACAGGTTTTCCATCTCGTGGTCAAGAATTCTTCCAAGTACATGACTATATCTTTTAGAAATAAAATGATACTATATCCGTCCCAAAATATAAGGGATTTTGCCAATATAAATACCAAATATTTTGGGATGGAGGTAGTAGATACAATGCACTGTCATAGATTTACTAACAGACAGCTTATTTAAAGACATTTTCTCTTTTGTTCTCAAGCACAATATTCTGCATTTCTTTTTCAATCTCCAAGGTGATCCCACCAGGGTTAAAATCTCCCTGTCATGGCAGATGGAAGTCTCAGCGGTGGAGTCAACAGAGAAGGCATCAACTACTACAACAATTTGATCAATGAACTATTATCAAAAGGTATGCATGTCTAGTCTTCACTATTTAGTTTCAAGTTCAGTCACTAGATGCAACTTGTGACAACCAGATTTCTTTATTCAAGATGCAAAATAATCTTATACATTTGCAGAGGTCCAACCATTTGCTACCCTATTCCATTTTGATACACCTCAGGCACTGGAAGATAAATATAAAGGATTTCTTAGCCCTAATATCATGTAAGTCAACAATTCTTCAGTACCTTTTGCTGACCATGTTAAATAAACACTAACTTCAAAATACTAGGGACCGTGCTACCTACTTCAGTTAAAAATATTGTCAACGTCATCATGCATATCAATTAGAATACCCGAAATTTCAATGCCAACAGCTTTTGGAGTTCTCTTTCCGATTTTTGTCGCGAATATTGTTTACTGCTATTTTTGGAAAGGGAGTCAGGACGGGTTTTGCTTTGGACAGGATTTAACCCCTGTTTCCACTGACACCAGCCTCAATAGTGCTCCCTTGTGATAGTCTTTTCAGCTACTGTTACTTGCAATGAAAATAGTGCTAACGTTATTGACTGTAAAGAACTGTTGCAGAAATGACTATAAGGACTATGCTGAAATATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGAACTTCTGCTCTATGGGCTATGCATCTGGCACCATGGCACCAGGCCGGTGTTCATCCTGGGAGAAGGGAAAATGCAGAGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCACCAACTACTTGCTCATGCAGAAACTGTTCGGCTTTATAAAGAGAAATATCAGTTCACTGAAGAAGCTATCAGGCAGTCGCCGTTCATCCGTGATAATAATTTAAATCGAAGATCTGCAAAGTTAAGTTCCATAATCCAAAATTATTTATTGCTTGGCATTCAATTTCAGCTGGGGCCTGGTGGTGGTGGTAGAGTTTTTTCAGTACAGACATTAGCGGATCTTCCATTGTTATTTCTTATAATTATCTATAATATAGTAAAACTCGGAAAACGAACCCCATAGTCAATACGGATAAAAGAGGAATCCTAGAATTCTAACAAGAAAAGAAAAACATTTGGCCATTAATCACTATGTTAAGTACAGAGGTCAAAATAGGTAAGAGAGATATTTATCTGTTTATTATGCAAGACCCTCTAGCCTCGAGAAAAAAACAGAAATCCTATAGACTCTCACATGAAAACAGAAAATCATGTCTTAATCTCGATGCACCCTGATACAAAGGTCTGGATCTGTTGATTAGGTCAAAGATATCAGATATGTTATTTTATTATGTATATACTAAAATACAATCAAAGGCCTTTAGAGTTGATATGGAAAAAAAAAAGAAAACAATATTAAAAAGCAAAAGCATCCACCGCTTATCTCGGCAAAACATCATCAATTAAGTTAATTTCACATCACCAGTTAAGTTATTTTCAAATACAAACACATATCAATATCCAACAAAACAGTTGTACGAGGAAGTTGGATCCAACAAACATGTAAAATTTGCAGGTAAGCATTAAAGTTTATGATAGCTAGCTGCAAAATTTGTGCTGGTAACTTGGATGAAAGGCTAGCTAGTTACTTTGTTAACTGCAGGACTATTTTATATCCTACATATCATGAAACAGATTCCTATCATATACACAGAAATGTGCATAGAGTTATATTCAAAACTTCTGCAATTTTCTACACAACAATATGTTCTAGGCCTTATAATTTAAACATGGATGTAACAGATATGCATTAGTAGTCGGTATCGTTTTAAGGAACAACGAAAACCCTAACCATGCATGCATATTGAGTGCTTATTTTGTTTACAAATCAATGGACTTGGTTTCAGCTTCAGCACTCACACCACACAATGAATAACAAGATGCATATCAAATGCAGGCTTTACAAAAGGGGAGGATTGGAATAATTTTGAACTCAGAGTGGTTTGTTCCTTTCTCCCAATCCAAATCCAGCAATGATGCTGCAAGACGTGTTCTAGACTTCATGCTTGGATGGTATTCTTTGTCTCACACATAATTTCATCATTATGAGAGTGAATATTCAACTATGAAATCCCTTCTAGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGAAATGGTCAAGGGTGCATTCGATTTTATTGGACTCAACTACTACGCTTCAAGCTATGCTGATAATGATCCTCCATCATATGGCCATAACAACAGCTATAATACTGATTCCCATGCTAAGATTACTGGTGAGCAACATTATCATGGACTGGTCTACTTGTTTTGTGCATATGAACCATGAAATACAAACATATGGCAACTGCTCGACACAACATATTAAAAAAACAAATAGAATTTGGTCAGCTCACATCATAGCCTTTGAGGCATTGTCAATTGCACACTTTATTTTCCCTCGAAAAACATGCCGACTTTATTTGAAAATGGCATGTTACATGAGCATCCCAGCTTTCCTTTCATGCATGAAATGAATGTGGAGTGCTTCAATACAGTATAATGGCTATGATTAGTCTGGTAATGATATCTCTTTAATGTGTGTGAAGACAAAATAAAAAAAAACACTATACATTTTCAAACATGGGGGTGGCACCCCGGGGTGCTCAACATTATCTCATCATGAATATTTGATAATTGGTTTGGATGTGTAGCTTGTTTTTGCCACTGTGCTAACATTTCGCAACTATGCTAGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGTGACCTACTACTTTGTTATCCACAGAACAAATTACTAGTAAATCAATTGATCAGGTGACATGATTGAACTCTATAAACAACATGTGTTTAGGCTGCTTCGTTTTGGTTTTACATCTACCCTGAAGGGTTGCGTGAATTGTTGCTTCATATTAAGGAAAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTAAGTTCCAACTAACATATGGATCATACAATTTCTCACTTTCTCAGCATGTGTGCAAACCAATACTACTATAACACCTTCTGATTTGATTTTTTTTTCAATCTAGACAATAGTGCACATAGGAGTTAGGACTTAATATTCTTCTCCTAGCTATGTAAAAAAAAGGGTATTATCCTCTTTTAGAAGTGATTTAACATTACTGATTCTTTCTGCATACATCTCAAGGTGTTGATGAAATCAATAATAAGACCATGCGACTCAAGGAGGCCCTGAAGGATGATATCAGGATTGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGTCAGAACATCAATTCAGACACTCAGCTATCAGTAAACAACTTAAGATGCTACTCGGTAACAGTGCGTTATTCCATATGCCTTCACAGGGATGGAGCAAATGTGAAGGGGTACTTCGCATGGTCTCTGCTTGACAACTTTGAGTGGTCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTATGATAACGGAATGAAGAGATACCCCAAGAACTCAGCCCGTTGGTTCAAGAAGTTCCTCCGGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014896

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014896&oldid=63790"