BGIOSGA014926

From RiceWiki
Revision as of 04:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014926| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014926, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014926

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014926, complete gene.

LocusTag

OSIGBA0115M15.9

Ensembl Transcript ID

BGIOSGA014926-TA

Ensembl Protein ID

BGIOSGA014926-PA

Length

4040

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21742868..21746907

Sequence Coding Region

21746889..21746907,21745187..21745872,21743736..21744913,21742868..21742976

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21742868..21746907 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21742868..21746907 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATCATGAAGATTGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCCCTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCCTGATACAATGGTACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGCCGGGCAACAAAATGTAGATAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAATTGCCAGATATAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAGGATGTCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATTCTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAACCTGCAAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAATACTGTAGATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACAATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGTTCCATCAAATGATTCCCATGAAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAACTGCTGATGGCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATAAGACAGAAATCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGGACACGTGGGAACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCTGTCCTGTCGAAAAGACAGACAGTTTTAGTGATATCGTCAATGGTGCACTGCGAGGATTTAATTTTCTTGAAACTGGTGAATCCATTGCAGAAGACAGTACGTTAGATTGTGTTGTAGAAAATTCAAGTATGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACATTTTGAGTGATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACAGTTTGAGTGATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATGAAGACAGTAGATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGGAAGATAGAAATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATGGGACGAGTTCAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTGAGAATGATCCAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAGAAGCAAACGATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGCAAACAGGACCAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAGAACCTGTAGCTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTGTAGCTCAACCAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATCCCTTTGAGTCAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTCATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGTCCTTCGCATTTCCAGTGCTACAGACAGAGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MQIMKIDDGRPYHSNVFHELVSNGGPKVDGEIERETKQHILPDTMVQQTNPSEYSFMKAGQQNVDKAIQIRPEDVSYDKDVVEIKLPDIMVSSNYGVQFVKDVCIDEGVLADQKAIAEKVSLNLNSSKGDTNGIRIKETADEPAKSVNDLKSQIVVLPEACVTDGDTVEQNHPCKLHDLEGNNTVDGLTVVNVEKSTPKQLVSNDNAEYCQQMGADVSESSENHGPNLNGEPVDQVPSNDSHETGASIASAITNVNGLSVESTADGHSGVVTEDGVSGVALNKTEINQINHYNPFIAYGSLEDTWEPKYSLPTIVDDVYSVPCPVEKTDSFSDIVNGALRGFNFLETGESIAEDSTLDCVVENSSMTDVQASEEKDEARSDDILSDERKIPVDQRSPVENSDSLSDPVDRALSSTETDGARNEDSRLDSTEASPSRSYVQPSEDRNDQVDNFVYGIRTDAAHGTSSGTSPLTGKTEPIDAKSENDPKCEIDSVQDGHDFNPREANDGTNISEDNKDSKSSTRQTGPVTEQNEPDSAKMTMQTEPVAQRNEPDSAKVTMQTESVAQPNEADSAKVTARNVIRNPFESSFSGPSIISGPLTPSGHIPYSGNISLRSDSSTTSTRSFAFPVLQTEWNSSPVKMAKADRRRLRRDRGWGYRILCCKF</aaseq>

Gene Sequence

<dnaseqindica>1..19#1036..1721#1995..3172#3932..4040#ATGCAGATCATGAAGATTGGTAATGGAATCTCTCACCTATCAATCTTCTGCTACCTTATAGGAGTATTTTGTATCTGTATGGCATTGGCTTAGCTGTAGAAATTAAGCACGGTGATTGCTTGGTTTGTAGGATATTCCAGAGATTGGTTTGCTTTGAACGTAACATTACTATTCATCATTCATCAACAGAAGATTAAAGATGATACACAGTTTGTGCGGCTTTAAAGAGCTGATCTTATTTCTACGGTGTAGCTTCTAGTCTTTACAGTTGCATTACCTCACACTATGGCGTTGGGATATGTTCTGAGGTGAATTTGGACTTGTGGAGATTAATGCCCTCATAAGAATTAGTAGATGATTCATTTTATGAAATCTTGTTTTGTAAATGAAAAATGTATTCGTCCAGTGACTTGCTGTGACAGATGTCTTTATTGATAGGTATGATATGGATCAGTACTGACTACTGACGGCTGCATTATCCATCCATTTCATTTAAATTCTCATTCATCAAATTGACTTGATTGTGACACAAAATAAATGATTTGATTTGTTGAACCTTGATATGTTTGGTAGGAAGATTGTCAATTTCATCCCAAAATTAACGTTTTGGGTTGTTATTTATTACGTTCTTTCAATAATACCAACAACCCCTTACTTAACCAACAAGACAGCTTTGTCTCTATCACAGTTATGTTCCACCTTTATGATGCAGTAAGATGGTTGAGTCAGTCACAGCCAAAAGAATCCGTGTTTGCAAATGAGTAAAAATGACAGTACAACTGAAATGAAAGAGAAATGACAGCAGAAGTAACCAGGTTCTCTTTTGCTCATTCCATTGTAAAAAGGTCTCTTCCTTTCAAAAATTTTTTCGAAACAAGTCTCATCACTTAGACATCAAGTATAGTTTTAGTTACTGTTTGACTGTCTAAATCAGAACTAATCAATGGTGAGAATTGTACATGTTGCTATGTTGTGAAATCATGTTCTTCTCTGTTCACTCTCTCAACGGTTGATGATTTTGATGTATGCTTGCAGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCCCTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCCTGATACAATGGTACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGCCGGGCAACAAAATGTAGATAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAATTGCCAGATATAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAGGATGTCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATTCTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAACCTGCAAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAATACTGTAGATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACAATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGTAAACTGCAACTTACAGTATTACAGACACTTAGAAAATCATCAATATGTTTGTCACATTAGTTCTTAAAACTCATTGTTGCCATCAGCATGCATCGTCATTGATTGGATTTCATCTTTATTATGATAAGACTATATGTTCTTTTGGTTCTGTAGTCTATATTTGAGTTTTTTTTATTCAAAATATGAGTTTGCACACTGAATGATGATCTTTTTAGCATTCATATGACTTCTCTCCACAATTGGACCACTAAATATGATACTCTTATTACAGGTTCCATCAAATGATTCCCATGAAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAACTGCTGATGGCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATAAGACAGAAATCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGGACACGTGGGAACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCTGTCCTGTCGAAAAGACAGACAGTTTTAGTGATATCGTCAATGGTGCACTGCGAGGATTTAATTTTCTTGAAACTGGTGAATCCATTGCAGAAGACAGTACGTTAGATTGTGTTGTAGAAAATTCAAGTATGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACATTTTGAGTGATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACAGTTTGAGTGATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATGAAGACAGTAGATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGGAAGATAGAAATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATGGGACGAGTTCAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTGAGAATGATCCAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAGAAGCAAACGATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGCAAACAGGACCAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAGAACCTGTAGCTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTGTAGCTCAACCAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATCCCTTTGAGTCAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTCATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGTCCTTCGCATTTCCAGTGTAAGTGAAGATGCACTTCAATTAAATTTTCTCAGAGTAGAGTAGCTCCCTTGCCTGCATTGCTATTGCTTTTTATAACAGTCATGCTGCCACCCCTCTATTTCAAAGGAAAATGGACGGCCTTTTTCTTTGAGATCAGGAAAATAGCCAACTGTGAATGGATCGTACTGTATATTCTGTGGACCTTTCTGAAAAAGAAAACCATTACTTAATATGTTTTCTTACACATTTGTGTGCATTTCCTCTCCTCTGTTAGTTTCACATAAATTTTCCACCCAATCTGTTCCATTAATTGGAATCATTCATTTGCCTGCACAAGAAAACTCTTGAGGTAAATAGTATATGGCCATGTTGGGGAGTTTTTAGCTGCTACAGCTTCTCCCGGAATTTCTAGCTCCCCCAAACAGTACGGATTGTCACTCAGATTCTAGGAATCTATAGCTATAGAATCTAGAAAAGGAACTAGAAGTCAGAAGCTAGGAAACATAGGTTTTCTAGGAAGGCAACCTTATAGGGAGGTTGTCACTCTTCCCCTCCTATCTCTATAAGCAGCTTCAAAGTTCACTTCACATCCAAATGGTGTCATCTGCTTATTCTTTTTATCTAAACACAGCAGACTGAGATCTTAGCTGGAAAAGCAGATTAACCATTGAATTATTTTCTCTTTGGCCAATCCACATAACATTCAGAATTTATGCTTCCCATATACTCCATGAAGCTAATGGATCAAGCTCCTCCTTTTCTTTCTCAATTTTTCAGGCTACAGACAGAGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014926