BGIOSGA014939

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Revision as of 04:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014939| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014939, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014939

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014939, complete gene.

LocusTag

OSJNBA0060P14.12

Ensembl Transcript ID

BGIOSGA014939-TA

Ensembl Protein ID

BGIOSGA014939-PA

Length

5089

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21498990..21504078

Sequence Coding Region

21504046..21504078,21502922..21503507,21502589..21502719,21501732..21502049,21501473..21501626
,21500512..21500804,21500367..21500426,21500167..21500286,21499954..21500076
,21499754..21499852,21499470..21499683,21499267..21499397,21498990..21499184

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21498990..21504078 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21498990..21504078 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACATGAAGCGCACGCACGAGATTCTCGAGAGAAAAACTGGAGGCTTAGTCATTTGGAGATCTGGAAGCACCATCATATTATATAGAGGAACTGACTATAAGTATCCTTACTTCCATGATAGAGAAATGAAGAATGACATGGATGAGTCATCAGAGCATACAAGTTCTGATGACGAGGACGCGGATCTTGCTATAATAGCTTCCGAACAAAGTGGCAGTGAAGAGGATTCTGATAATCCTGCAGAACATGGTAGCAATCATACTGAGGAGGGCGATGATCTTACTAGACGGTTTGGTGTTGATGCGCTTGAGGGAAATTTAGACATTGGATCTGCAGAGCAAAGCATTAACAGTGCTACAAAAGATCAGCAAGCAATATTACATACAAGCACTAATGTGTCTCGTCCTAGCGAGATCAGTGGTCGAGCTCGGTCAACCTTAGTTGCTGGTGTTGGTTCTCCAAATAAGTTTCGGTTACAATTACCTGGGGAGGTCAAACTCGCAGAGGAAGCTGACAAATTATTGGATGGGTTGGGTCCACGGTTTTCTGATTGGTGGGGGTATGACCCTCTTCCAGTGGATGCTGATTTGTTGCCAGCAATTGTTCCTGGATACCGACGAAGTAGTAACCTTCAAGGGTTGGCTGCATCTATGATCAAACTATGGGAAAGATGTGAGGTAGCAAAGGTTGCAATTAAGAGAGGTGCAGAGAACATTGATAGTGATCTCATCTCTGAGAAACTGAAGGGCTTGACAGGTGGGACCCTTTTATCAAGGGATAATGAGTCAATTGTATTCTACAGAGGGAAAGATTTCCTGCCCACAGCTGTCTCTCTTGCAATAGAAAAGCGTAGAAAGTATGGCAATTCTACAATCAGTAACCCTAAGCTTAATTTTGACAAAAGCACACCGCAAAATTCTTCTAAACTGAAGATGGCTACTGATGTCTCACTAGATGGGCATGAATGCTATGAAAAGAAGCATAAAGATGAAACTGCAGTTTCAGATAATAGAGCAGAATCTCTTAATGTGTTTACCCAGAATGTTGAGGCCAGATTATCTCAGGCAATTGCAGAGAAAGAGAAGACTGAAAAGCTTATTGAAGAGCTAGAAATGTCGTCTGAGCCTTCTAGAGCTGAAACTAGAGAGGTTATCTCAGAAGAGGAGAGGTACATGTTGAGGAAAGTTGGTTTAAAGATGAAATCATTCTTATTGCTAGGAAGGAGAGGAGTTTTTGATGGAACTGTTGAAAATATGCACCTTCACTGGAAGTACCGAGAACTTGTCAAAATTATATGTAAAGAACACAACATTAAAGATGTTGAATATGCTGCTCGAACTCTAGAGGCTGAGAGTGGTGGTATATTGGTGGCAGTGGAAAGAGTGAGCAAAGCACATGCAATTATAATATATCGGGGAAAGAACTATCAGAGGCCATCAACTCTCAGGCCAAAATCTTTGTTAAATAAAAAGGATGCTTTGAAGCGTTCTGTGGAGTATCAGCGTTATAAGTCCCTGAAGCTTCATGTGCTTAATCTTTCAAAGAATATAGACTACTTGAAGGATCAGATGTTTTTTAAACAAATGGAGGTTCAACCTGTTACTCCAACTAATGGAATGAACTCAGGCCACCACAACCAAGGCATTCTTGATCTCAATGTTAATTCTGGAACATTAGTGGACAAAAAAGAAGAAGTGTCTGAAGTTCTTCCTGAGTGTGCCAAGTCAGTGGTTGTAGAGTGTTCTTCAGGTGAAAGTGAAACAGAGGGAACCTCAGTATTAACCAAATCTGGAGTTCCCTTGGATGTTATGCAGAACACGTTGTTATGTTTCAGCAAGCATACAGATGATCTGTCTGAAACTACAAGTTCCTGTCTGACTGAGAGTACAAGTACTTCATCTGAGAGTACACACCAAAGTCCACTTAGTTCTTCTGTGATGCACAATTCAGATAGTCACAGAGTAAGTGGCTCAAAATTTGTAGGAACCCTTACACCTGTACACGAGCTGAAATTGGATGAGAAATCTTCTCAGTTGCCTTCCGCAGCTGCTCCACTTTCAAACCGAGAAAGGCTCATGCTAAGGAAGCAAGCTCTGAAAATGAAGAAACGGCCAGTACTCGCTGTTGGGAGGAACAATGTCATCACAGGAGTCGCAAAAGCAATAAAAACACACTTCAAGAAGCATCCTCTTGCTATTGTGAATATCAAGAACCGAGCAGACGGAACTCCAATTCAGCAGTTGATTTCAGAACTAGAGGAAGCAACTGGATCGGTTCTAGTGTCGCGGGAGCCCAACAAAGTGATTTTGTACAGGGGTTGGGGAGCAGATGTGGCCCAGAATAGCTTAAGTGGAAATAATAGTACAGAACAAGTTGAAAAGGAGGTGATATCACCTCAGCTCCTGGAAGCCGTCAGATTAGAATGTGGATTACACCCTGGTGAATCAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MNMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTSSDDEDADLAIIASEQSGSEEDSDNPAEHGSNHTEEGDDLTRRFGVDALEGNLDIGSAEQSINSATKDQQAILHTSTNVSRPSEISGRARSTLVAGVGSPNKFRLQLPGEVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYRRSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFTQNVEARLSQAIAEKEKTEKLIEELEMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQMFFKQMEVQPVTPTNGMNSGHHNQGILDLNVNSGTLVDKKEEVSEVLPECAKSVVVECSSGESETEGTSVLTKSGVPLDVMQNTLLCFSKHTDDLSETTSSCLTESTSTSSESTHQSPLSSSVMHNSDSHRVSGSKFVGTLTPVHELKLDEKSSQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQLLEAVRLECGLHPGESE</aaseq>

Gene Sequence

<dnaseqindica>1..33#572..1157#1360..1490#2030..2347#2453..2606#3275..3567#3653..3712#3793..3912#4003..4125#4227..4325#4396..4609#4682..4812#4895..5089#ATGAACATGAAGCGCACGCACGAGATTCTCGAGGTGAGCGCTGCCCCGCGCATATGATAATCGAGTCCAGCGTAGGTTTGTAGCTGTGCGCCTGTGCCTCGCCTAGTAAGTAAAACGTTCAGAAAATTTGGATGCCGGAAGGCATCGGAGTGCTACTATATGTTGAAATTGCACAGAGTATTAGTTGTATGTTAATTCTGAATTTCATCGCACAATGTGACAGGGTAAGATGCTGAGTATAGTAATATAGTGCTAGCATATGATTGTGCCCACTTCGGAAGTCCCTGTTAGCATGGAAATGGCAGCATGTTTATTCAAAAGGGATACAACTTTGAAGTGATCAAGGATTCAAGATAGGGATATTTTATTTTTAATTGTTTGAAATGAATCCATTTAGCAGTGTACTGGCATGCACATAATCATTCCTTCTTCGAAGCATTTTATTATACCAAATTCCAAGGCATTTCTTGGATTTTCTCTTAAAGTAATCTATCTCAATTTTTGTTTTAGGGCATTTCTATCTCAACGCTTTTCAGTTTGCAATTGACATGCTCAATGTGTTTTTTTATAGAGAAAAACTGGAGGCTTAGTCATTTGGAGATCTGGAAGCACCATCATATTATATAGAGGAACTGACTATAAGTATCCTTACTTCCATGATAGAGAAATGAAGAATGACATGGATGAGTCATCAGAGCATACAAGTTCTGATGACGAGGACGCGGATCTTGCTATAATAGCTTCCGAACAAAGTGGCAGTGAAGAGGATTCTGATAATCCTGCAGAACATGGTAGCAATCATACTGAGGAGGGCGATGATCTTACTAGACGGTTTGGTGTTGATGCGCTTGAGGGAAATTTAGACATTGGATCTGCAGAGCAAAGCATTAACAGTGCTACAAAAGATCAGCAAGCAATATTACATACAAGCACTAATGTGTCTCGTCCTAGCGAGATCAGTGGTCGAGCTCGGTCAACCTTAGTTGCTGGTGTTGGTTCTCCAAATAAGTTTCGGTTACAATTACCTGGGGAGGTCAAACTCGCAGAGGAAGCTGACAAATTATTGGATGGGTTGGGTCCACGGTTTTCTGATTGGTGGGGGTATGACCCTCTTCCAGTGGATGCTGATTTGTTGCCAGCAATTGTTCCTGGATACCGTAGGCCTTTTCGTCTACTTCCTTCAGGAGTACCACCGAGGTTAACTGATAGAGAAATGACAATCCTTAGGAGACTAGCTCGTCCCCTACCCTACCATTACGCACTTGGTAATTTCTAGTTATTTGTCCTGTATAATATCTTTCATGGCTTTGACTTTGATAAGGACCACTGTTATTTACTTTCGTGGTGTCATTTATCTAGGACGAAGTAGTAACCTTCAAGGGTTGGCTGCATCTATGATCAAACTATGGGAAAGATGTGAGGTAGCAAAGGTTGCAATTAAGAGAGGTGCAGAGAACATTGATAGTGATCTCATCTCTGAGAAACTGAAGGTAGGTTGGTAAAGAACCCAGCTATGAGGAATTAATTGTAGATATGTAATTATTCATAGCATTTGACATTTCTCGAGCATTCTTGCGATAAAACATTGATGACATTACAGATTTATCTTTCACGTGTCATCGAATTTTGAAATGTAAATCATTTGCCTGTATTCCTAATTTCCTATCATAATTGAAGTTGAACCATAGCAGCCCAGAATTTTTACATGTTGAATCAAAATCACTTCTTTTTATGATATATGTTCCCTCATACTCATGCATATTTTACATGCAGTATGAAGGCACTTAACAATAGATTCATATTTTTTATGTGTCGCCTTGATTTATGTGGCACCAAATATTAGGAAAATACACTTTAGTCTCTCTTTCTGATGTGAACCATTTCAGCACAGGCTCCAGGCCTTCAACCTATTCTATCCTAAACTTTCCATTATGAGAAATTATCATTACAATCATCAGTTTCAAAAGAAAATCAGAGAGGAGGAGGGGGGGGGGGGTTATGTTCCACCATGACATTCTTAATCTTGCAGGGCTTGACAGGTGGGACCCTTTTATCAAGGGATAATGAGTCAATTGTATTCTACAGAGGGAAAGATTTCCTGCCCACAGCTGTCTCTCTTGCAATAGAAAAGCGTAGAAAGTATGGCAATTCTACAATCAGTAACCCTAAGCTTAATTTTGACAAAAGCACACCGCAAAATTCTTCTAAACTGAAGATGGCTACTGATGTCTCACTAGATGGGCATGAATGCTATGAAAAGAAGCATAAAGATGAAACTGCAGTTTCAGATAATAGAGCAGAATCTCTTAATGTGTTTACCCAGAATGTTGAGGCCAGATTATCTCAGGTTTGCTTTTCTTTTCTAGTAGTGCCATCTCTTGATAATTTTGATTTGGTAGTTTGAAAAGAAAAACACTTGAAATAGTTAAATTCATATAGAAATATTGTTCAGGCAATTGCAGAGAAAGAGAAGACTGAAAAGCTTATTGAAGAGCTAGAAATGTCGTCTGAGCCTTCTAGAGCTGAAACTAGAGAGGTTATCTCAGAAGAGGAGAGGTACATGTTGAGGAAAGTTGGTTTAAAGATGAAATCATTCTTATTGCTAGGTTAGTATTCTCCTCAACCTTGTATTGTGCAGCATGCATCTGTTCAGAAGTCAAAATGCTACCTAATTTGACTACCAAATTAGTTATAGGAAAGTAGATTACCAGACAGTGTTCTCCTTGGTGACCCCTAGGCATTCGGTGTCCGCTCCGCCTAGGTCAGCAAGCTGATTTTTCCCGCCTAGGAAGCAGTTAGGCACTAGGTCCCACCTATGGCCGTGCCATGTGCCTACTGCCTAGCACCAAGGGAAACACTTCTATCAGACTGTAATATTACCACTTCTAGAGTTTTCATCTGTTTAGCTCATACCAAGTGGCATTTTAATCCTTGTAAATCCTTTTTGTGGAGACAGTGTGAGTATTATGTGGTTTTTTGTTACTTTGGGAGTGCACATATTTGAATTAGTTCGGTCATCTGTTGTGATTCATCGCATAACCTCCTTTTGTACCATTCTATACTTGTACATGATTTGACTATTATTGCCTTTCCAAGCAGTAGCATCCGCAGCCCTAAGGTCAATAAACAAAAAGAGAGCGCGACATACCCATGGACTCTATACAAACTGTTCTTTCTGTGATTTCTGCACGATATTGATACCTCATTCGCTTGTATCTTACTGTTTTTTATTATTTCTTTAATTCAACATCCTTTTTTTTTCTATTGATTGCAGGAAGGAGAGGAGTTTTTGATGGAACTGTTGAAAATATGCACCTTCACTGGAAGTACCGAGAACTTGTCAAAATTATATGTAAAGAACACAACATTAAAGATGTTGAATATGCTGCTCGAACTCTAGAGGCTGAGAGTGGTGGTATATTGGTGGCAGTGGAAAGAGTGAGCAAAGCACATGCAATTATAATATATCGGGGAAAGAACTATCAGAGGCCATCAACTCTCAGGCCAAAATCTTTGTTAAATAAAAAGGATGCTTTGAAGCGTTCTGTGGAGTATCAGCGTTATAAGGTGAAACTGAAACCTATTAGCTTGCTGTGGTTCACTTGTGGAGTTATTTTTTAGATCTCAAATTAATATTCCTTGTTTATTTTAGTCCCTGAAGCTTCATGTGCTTAATCTTTCAAAGAATATAGACTACTTGAAGGATCAGATGGTGAGTTTTTTGTTCAATGCTGAGCCTTTTCCATTTGTTTTGTTGTAAATGCTATTATTAATTTACTGATGATGCTTCAGTTTTTTAAACAAATGGAGGTTCAACCTGTTACTCCAACTAATGGAATGAACTCAGGCCACCACAACCAAGGCATTCTTGATCTCAATGTTAATTCTGGAACATTAGTGGACAAAAAAGAAGTAAATTTTATTATCTTAACTGAAGTTCCATTATGGCTCAATATATTCAATCATGTCTGATTATCTGTTTATTAAATATATATGGTCAAGGAAGTGTCTGAAGTTCTTCCTGAGTGTGCCAAGTCAGTGGTTGTAGAGTGTTCTTCAGGTGAAAGTGAAACAGAGGGAACCTCAGTATTAACCAAATCTGGAGTTCCCTTGGATGTTATGCAGGTTTCTGGTCCTCCCATTCCTTTACGAAAATTCTTGTGTGTTTTGATTCTTCGCAACAATTTTGTGGTGGACTAATGGTTCATTGCACATTGTATTTGCAGAACACGTTGTTATGTTTCAGCAAGCATACAGATGATCTGTCTGAAACTACAAGTTCCTGTCTGACTGAGAGTACAAGTACTTCATCTGAGAGTACACACGTGAGTTTATTGTTGATTTTTCCCAGTGCATGGCAATTATTTTCTGCTGATGCTGATGATTTGACTGCAGCAAAGTCCACTTAGTTCTTCTGTGATGCACAATTCAGATAGTCACAGAGTAAGTGGCTCAAAATTTGTAGGAACCCTTACACCTGTACACGAGCTGAAATTGGATGAGAAATCTTCTCAGTTGCCTTCCGCAGCTGCTCCACTTTCAAACCGAGAAAGGCTCATGCTAAGGAAGCAAGCTCTGAAAATGAAGAAACGGCCAGTACTCGCTGTTGGTAAGTCTTTGTCCCCAATACAGTTTACACCAGATTTCAATTAATATGCTGAGCATCCGATTCCTTTCATAGGGAGGAACAATGTCATCACAGGAGTCGCAAAAGCAATAAAAACACACTTCAAGAAGCATCCTCTTGCTATTGTGAATATCAAGAACCGAGCAGACGGAACTCCAATTCAGCAGTTGATTTCAGAACTAGAGGTTTGTATAGTCTATAACAGGGAGTAGTTCACCCCAAAAATACTGAATCAATCTGAAATTCTATATTGTTCAATGGAATCAGGAAGCAACTGGATCGGTTCTAGTGTCGCGGGAGCCCAACAAAGTGATTTTGTACAGGGGTTGGGGAGCAGATGTGGCCCAGAATAGCTTAAGTGGAAATAATAGTACAGAACAAGTTGAAAAGGAGGTGATATCACCTCAGCTCCTGGAAGCCGTCAGATTAGAATGTGGATTACACCCTGGTGAATCAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014939