BGIOSGA014941

From RiceWiki
Revision as of 04:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014941| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014941, complete gene.| tag = BADH| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014941

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014941, complete gene.

LocusTag

BADH

Ensembl Transcript ID

BGIOSGA014941-TA

Ensembl Protein ID

BGIOSGA014941-PA

Length

4427

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21454571..21458997

Sequence Coding Region

21458883..21458997,21458627..21458769,21457806..21457886,21457571..21457719,21456858..21456950
,21456653..21456776,21456466..21456531,21456253..21456319,21456005..21456081
,21455821..21455934,21455431..21455508,21455195..21455346,21455059..21455119
,21454815..21454921,21454571..21454661

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21454571..21458997 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21454571..21458997 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAAATTTGAGTCCTATGTACTCAAAGAACCCATTGGGGTTGTTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGGGCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMEKFESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCRLGSVVSEGQYKKIMKFISTARCEGATILYGGARPQHLKRGFFIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDNYLSVKQVTKYCSDEPYGWYRPPSKL</aaseq>

Gene Sequence

<dnaseqindica>1..115#229..371#1112..1192#1279..1427#2048..2140#2222..2345#2467..2532#2679..2745#2917..2993#3064..3177#3490..3567#3652..3803#3879..3939#4077..4183#4337..4427#ATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTACTCCGTCCCTTTGCTTTTGCCCCCCATATCCCCTTCGCCCGCATTTGGTTTGCTCCATCCCAAGCACGGGATTCCGGTTAATTTGTTTGTGGGTTTTGTGATCGGTGAAGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGGTGCTCAGCTTCTATGCCTCCTAATCCTGCTATTAGTTTGGACTTTGGAGCTAGATGAGTTGTTGAGCAGAGCTCTCCTATGCTGCTAACCTGCTACTTCCACCTTGCTGTGTGACTGAAACTTGCTTTCGGGGATTGATTAAAGGACGCTCTTAGTGCCGTAAACTGCTTCTCAAATTAGGTTGATCAACTCGGGTTTAGTATTGAAAAGAAAATTCATACTTATGTCCCATTTTTATTGCAAGTCGGTATTTTACTTCTGTTGTATATGATCATAGGAAGGGGGTGCACATAACAATATATTAGGAACAGTAGGAAAAATTGGAACAACATATCAGGAACAGTGAAAAATCATGGCTAGTTTAGTCTAGCGGAAATTATGTTTACTGGAAGCTGTCAATGGGTTGCAGATGAGATTCTCCACTAAAGACAATGTTGACTTGCCCTTGCTGTTACAACGAGTTCACTGTTGATTATCTTTGAACAATGGGTTTCTCAGACTTCAGTTTTTACAGATGGAAGCTTTCTCAGATTGAATGTTATTTCCAGTATGTTTACTTAGTTTACCCTTTTTGCTGAACTTTAAATGGAAAGCCCCAAGGCTGAAATTTTTGTTATGATGAGAAGCCCATAGTATAACTTGATCGGTGCTTTTAACAATTGGTGCCCACCCTGTCATTAGTATTTTTGTTTGTTATAACCGGCAGTACATTTATTGAAATGTTGTGAACTGGCTGCAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGTATGTATTATTATTCACACTATGGTTTTTAGCATGACACAAGATTTTCCGTGCTTTATTTGATGCCTTGGCCTTGTTAATTTTAGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAAATTTGAGTCCTATGTACTCAAAGAACCCATTGGGGTTGTTGGACTTATCACTCCCTGGTATAAGAAATACATACCTTGCCTTGAAAAATTGATACTGTTTAATTGTATCATAGTATATTTTTTTGGCTTCTGAGATGTTGTAGTGTATCGAAATACTTTGACACGTCCAATTTCCCTCATCTTATTAGACTCAAGGTGTTTTGTTCACACCGGAAGCAATTGTTCTTATTTCAGTCTTTTCATCCTTTTGTTGGTTCATGTTTGATAACAGAAGACCAATTGGAAATTTCAAATTCCTCATGTTTTGCATCTGTAGTTTTGTTTTCCTGTCAGAGGAAAGACTATTAACAAAATATCATGATCCTTTTGTATTGTTTACCTTTTGTACGTGATCATCCAATAACTTTGAAGTTGATCTTCCCAAGCCCCCTTCAGGTATTCATACCAATCTAAAACTCTAAAAGTGCTATGTTGATCCATAAAAAATAGTGGTGGCGTTCATTGCCACCTGTTGATTCCTATCACATGAGTACAGACATGCACCCCTATAACATATTGATGTTCTCCGTGTTTCATTGCTTTGTGTAAATGCGCTTTAGGCTTATGAGATAAAGAAATTTGAGTTATAGTAAAAGGCTAATCGTTTGGATTATTTTCTTACTCATGCACACATGAAGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGTAAGGATCTAAGGATTGATCATTTACAATTCATTTATGCAAGGTCTGTACCCCATGACTAAAAATATGTTTTTAAACCAGGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGGTCAGACCTCTTCCTAATATGTACTACATTCATGTGCTTACAAACACACTGACAGAGTATCACATATTTTTAAGTGACTACCCTAAGTTGTTTTTGAATTTTATGTGGATCCTTTCTGTAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGGTTTGTTCTCTATATATGATCATGCCCTGAAGAGAATTTCTAATAACTTCTGACATTGAATGCTTCTGTCGGAGCAAGAAACCTGTGCATTATGCCTTGATGTCCTCGTAAGTCTAATTATATTGTGCTTTTTTTTTCTTGAACAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGGTATTAGGTATCTTCCACTCTCCAGCTTTCCCACGTCAACTATGCTCCTAATTCAATTATGCGATGTTGTCAAATCACTTGTTTTTTGTTTAATTCATTACCTGCAATTCTGTAGTTATTCAAGTAAGTATTGCTAGCTAATTGTATGTGTATGTGCTAAATTTGAAACAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGTACGTATGTTCTTCTGCTTATTTTACAGCTTAAGTCATGTCCTCGTACATGACATGAAGATATGCACAGGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGGGCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGGTAATGTAAATAGCTTATTGCAGCTCCTGAAGTTCAGTTGCAAATATTCATTTCTCTTGTGAAGTGTGAACCTGTGAACTTTGATGAATATTTCACGTCATTCAAAACAAAATTATTGCTCAAGATAATAGTGAAATACTAAAAATGCATGTAACAGTAATAGTTTACTTCTTTGGAAATTGCTTTTCTTGCAAATATTGTATTCTGCAGCCATGCCTTTCTATACAGCCTTACATACCTTGTCATCTGAATAACTGCATCATTATGTAATTCGGTAACTCGGACGACTTAAGAACCTTTTTCTCATTTCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAAGTATGTATCCTTAGACTTCAAGTTACATTAGTCCTTGGTTCCTCAGTATTTGATCCTAACCAAGCTAAATTGGTGTACTGACAGCACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCAGTGAGTTGCTTTATGTGGAACTGTGGAAAAAAAAAAAAGCCTGTTCTTGTCTTTTTAATCTGCTTCTTTTCTCAGCTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGTAATTTTGGGTTGAATTACGACGTGCCTATCAATTTTACCCTTGACTAAATAGCTGGGACCCTGGGATGATGATAACCTGGTAATGAAATGGATGTATTTGATCTCATAAATCCACAATACATGTGAAACCTGCAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGTGAGTCTATTACTATACTTATTTAGAACAGTAAACTCATACAAATGTGATAAGCAGTTAATCCGCAGTGCTTGATGTCACAAACTGTGGCCAACTGAACAAGCATTGGCTGTGCAATCTACATCCTCTGAAATGTCTTTGCTTATGCTTCAGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014941