BGIOSGA015017

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Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015017| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015017, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA015017

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015017, complete gene.

LocusTag

OSJNBA0027P08.3

Ensembl Transcript ID

BGIOSGA015017-TA

Ensembl Protein ID

BGIOSGA015017-PA

Length

4684

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20346272..20350955

Sequence Coding Region

20350836..20350955,20350673..20350727,20350322..20350551,20349569..20349685,20349187..20349238
,20348847..20348938,20348520..20348594,20348312..20348400,20348063..20348112
,20347919..20347959,20347576..20347785,20346966..20347033,20346783..20346843
,20346272..20346475

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20346272..20350955 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20346272..20350955 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACGGAGGCGACGACGATCGAGGACACGCCGACGTGGATCGTCGCGGCGGTGTGCTCCGCCATCGTGCTCATCTCCTTCGCCTTCGAGCGCTCGCTGCACTACCTCGGCAAGGCGCTGGAGCGCCGGAGGAGGACGCTGTACGAGGCCTTGCTCAAGCTCAAAGAAGAGCTGATGCTGCTGGGGTTCATCTCGCTGCTGCTCGTCGTGTTCCAAGAGCCGATACAGAGGATATGCATCGCCGAGAGCCTCATGGGCCACTGGCTGCCTTGCCGGAGCGACGGGAAGGCGTCGTCGCATCACGGCGTCGCCGCCGCATCGGCTGCCGTCGTCTCCGGTGCCGGCGCGAGGAGGCTGCTCGGAGAAGGGACAGCCGGATCTGGGCACTGTTCGAGCAAGGGAAAAGTTCCATTGCTCTCGCTCCATGCCATAGAACAGATACACATATTCATCTTTGTTCTAGCCGTCACCCATGTCGTCCTCAGCGCCGTCACCGTTCTTCTGGGACTTCTGCAGATGCGAAGATGGAGGCATTGGGAGAACGCCATCAAGGCAGATGGAGACTTTGGTCCTAAGATGATCAACAGAGCGCAGCAATTCAAGTTCATCCAGGATCGGTACAAGGGGTTCCATAAAGTCACAATGGTCATAATTTGGATGCGTTCTTTCTTCAAGCAGTTCTATGGATCGGTAACCAAGGATGACTACACAGCAATGAGGCTTGGTTTTGTCATGGAACATTTTAGGGGGCACCCAAAATTTAACTTTTACGACTACATGATTAAAGCTCTTGAGAAGGATTATAAGAGAGTAGTTGGCATAAAATGGTATCTCTGGATATTTGTAATGATCTTCCTCCTACTAAACATCACTGGTTGGCACTCCTACTTCTGGATCTCATTAATCCCATTGGTTCTGCTGCTCCTGATCGGAACGAAGCTGGAGCACATCATCACTCAGCTAGCCTACGAAGTGGCCACGAAGCACACCGCCGTGGAGGGGGACATAGCCGTGAGCCCGTCAGACAATCTCTTCTGGTTCCACAGCCCCAGGCTCGTGCTCGCCCTCCTCCACTTCATCCTGTTCCAGAACGCGTTCGAGTTTGCGTATTTCATCTGGACAATGGCAACGTTCGGCTTCAACTCCTGCATCATGGACAGGCTGCCGTACAGAGTGTCAAGAATTGTCATATGCGTCGTCGTCCAGGTCCTCTGCAGCTACAGCACGCTCCCCCTCTACGCCATCGTCTCCCATATGGGGAGTTCGTTCAAGAGTGCCGTCTTCTCAGACGACGTCGCGGACAATCTAAGAGAATGGGCCGACGAAGCTCGGCGGCGCACAGGAAGAGCCGCCGCCGGTGTTGGCTGCCTAGGTGCGGCGGCAGGATCATCAAGGCGGGAAGGGATCACATACAAAACATGTGAGAGGGGCAACAAAAGGTACACAGTACTCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAATEATTIEDTPTWIVAAVCSAIVLISFAFERSLHYLGKALERRRRTLYEALLKLKEELMLLGFISLLLVVFQEPIQRICIAESLMGHWLPCRSDGKASSHHGVAAASAAVVSGAGARRLLGEGTAGSGHCSSKGKVPLLSLHAIEQIHIFIFVLAVTHVVLSAVTVLLGLLQMRRWRHWENAIKADGDFGPKMINRAQQFKFIQDRYKGFHKVTMVIIWMRSFFKQFYGSVTKDDYTAMRLGFVMEHFRGHPKFNFYDYMIKALEKDYKRVVGIKWYLWIFVMIFLLLNITGWHSYFWISLIPLVLLLLIGTKLEHIITQLAYEVATKHTAVEGDIAVSPSDNLFWFHSPRLVLALLHFILFQNAFEFAYFIWTMATFGFNSCIMDRLPYRVSRIVICVVVQVLCSYSTLPLYAIVSHMGSSFKSAVFSDDVADNLREWADEARRRTGRAAAGVGCLGAAAGSSRREGITYKTCERGNKRYTVLR</aaseq>

Gene Sequence

<dnaseqindica>1..120#229..283#405..634#1271..1387#1718..1769#2018..2109#2362..2436#2556..2644#2844..2893#2997..3037#3171..3380#3923..3990#4113..4173#4481..4684#ATGGCGGCGACGGAGGCGACGACGATCGAGGACACGCCGACGTGGATCGTCGCGGCGGTGTGCTCCGCCATCGTGCTCATCTCCTTCGCCTTCGAGCGCTCGCTGCACTACCTCGGCAAGGTGGACCGAACAAATCAAGAACCAATTAACTAACCAAGCTAATTGATTGCACATTTTTGCACTGCTTATTTCAGCTTCAGCTCATTAATTTCTTGCAAAGCTTTGCAGGCGCTGGAGCGCCGGAGGAGGACGCTGTACGAGGCCTTGCTCAAGCTCAAAGAAGGTTGGCCTCGATCGGTTGATTAATCGCGCGCTGACACTAATACCAGAAAAAATTAACTGAACTTTTTAATTCGATTCAGTTTTTCTTCCGAATGTACATCTCCTGTCTGTGTGATCCGTAGAGCTGATGCTGCTGGGGTTCATCTCGCTGCTGCTCGTCGTGTTCCAAGAGCCGATACAGAGGATATGCATCGCCGAGAGCCTCATGGGCCACTGGCTGCCTTGCCGGAGCGACGGGAAGGCGTCGTCGCATCACGGCGTCGCCGCCGCATCGGCTGCCGTCGTCTCCGGTGCCGGCGCGAGGAGGCTGCTCGGAGAAGGGACAGCCGGATCTGGGCACTGTTCGAGCAAGGTATATTATTTTTTCTCTCTTTTGTTTTAATGTAAGTTCGAGCAAGGTATAGTTTAGCTTTTGTACTTTTGCTTGCGTTGGAAACGATTTCAGACTCTCATGACTTTGGTATAGTTGTTGGCTTGTTGCTTAGAAGGCTTTTTTATTGAGGCCCTATTCAGATTGGAGGAATTTTGAATTTTAGAGGAATTGAAGTGTTTTCTAAGAAAATCCTGTAAAATTTCTATGTTTTGAAGGAACCCTAAGAAAGAAGACTTCAAGCTGACTGAGGTCAACAGTCAACTGATGCTCCATTGTTAGGGTTCTACACCGTGCACCTAATATTATACATTACCACAAGTTAATACTAGAAAAAGTGATGACCTCCGGTATCAACCACAAGTTAAAGTGCATTTAATGACAAACCAAGTCATTACAAAATAAACGATAATTATATGATCTTTTTAATAAAACGATGGTCAAATATATGTATCATTTTGTTTGGTCCATAAGGACTTTGGCAATGCAGAGTTTTTTCTTTCACTTTTTCTAGGAACAGATGTGATATGCAGTGCCTGCACGGTTTCTGTCTCTCATTTTGAAACAAATTCATAAATTGAGATTTGAAATAACACATCTCTTCTCATCTTGTGTCAGGGAAAAGTTCCATTGCTCTCGCTCCATGCCATAGAACAGATACACATATTCATCTTTGTTCTAGCCGTCACCCATGTCGTCCTCAGCGCCGTCACCGTTCTTCTGGGACTTCTGCAGGTTAGGCTAGCTGAAATATAGTACTCCCTCTGTTTTAAAATGTTGACACCGTTGATTTTTTAGCACATATTTGACCGTTCGTTTTATTTAAAAAAATTGTGAAATATGTAAAACTATATGTGTATATGAAAATATATTTAACAATAAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTGAATAAGACGAATGGTCCAACACGTACTTAAAAAGTCAACGGTGTCAAATATTTTGAAACGGAGGGAGTATCATATCAGCCCATGCTAATCCAGTAATCCTGTCAGCATATGCTGGTCCATTTCTAATTTTACGTGTCCAGATGCGAAGATGGAGGCATTGGGAGAACGCCATCAAGGCAGATGGAGACTTTGGTAGGACAATTACGATGAATATTTATTTTCTTTAAAAAAATCAACCTTGAATGCAAATTAGGCTCACTAGGAACACAAGAAAATTTAGGAACTATCTCCTATAAACTGTGAAACAATTGTGCTTCAAACGGGAAATTGATAGATCCCATTTTGAGATGAATGCATAGATGCAGCTGTTCTGGGAGGCTGGGACTATGTTGGTGTCGCAGCATAAGAAAGCTAGTTTATATTGCCATGATCAGCTGCAGGTCCTAAGATGATCAACAGAGCGCAGCAATTCAAGTTCATCCAGGATCGGTACAAGGGGTTCCATAAAGTCACAATGGTCATAATTTGGATGGTATGCGTGCATTAATTATGCAATCAGCAGTACTCTCTCTGTCCCATAAAAAACCAATTTAATACTGGATGTGACACATTCTAGTACTACGAATCTGAACATTCTAGAATGTGTCACATCTAGTTCTAGATTTGTTTTTTTTTTTTGACGGAGGGAGTAGGCTTAAGCCTTTTTGTGTTGAGCATCACCTGATGTATTGATCATGTATGTATCTCTGGAGTCTGAACTTCAGTAACGGTTTGCTTTTTTCAGCGTTCTTTCTTCAAGCAGTTCTATGGATCGGTAACCAAGGATGACTACACAGCAATGAGGCTTGGTTTTGTCATGGTACACTGATACAATGCTTGGCATTCATTGATTCATATGTTAGCCATGTGGTCTTATTGCTGTCTTCTGATCCTGAATGCATTTTATCTGGTTGTGTTCATTTGTTCTTTTGATCATAGGAACATTTTAGGGGGCACCCAAAATTTAACTTTTACGACTACATGATTAAAGCTCTTGAGAAGGATTATAAGAGAGTAGTTGGCATAAAGTAAGTTTGTTCTATGTTTTTCCTATTATTTCCGATCGTTTATACACTGCTAATTGAAAGCATGTATTTCTTTTGTAAGCAATAGCAATACAATCCATCAGTCCCTACCAACATCAGCTACAGCTGCTAGCTGTATTAACAGTTTAACACTGACCATCATTACAAACTGCCACTAATTACTCGTTTTGCTGCAACACAGATGGTATCTCTGGATATTTGTAATGATCTTCCTCCTACTAAACATCACTGGTTCGTGGCGTGACTCTGCTCATCCATTCAGTAAAAACCTGTTCCTGGAACACTATTCAGAGATGAAACTGACCATGTTGCATATGATTTTCTCTGTGAAAAGGTTGGCACTCCTACTTCTGGATCTCATTAATCCCATTGGTTGTAAGTAGTACTACTTCTTTCATATATTATGCTGCAAACAGTTATGTACTTACTACTATATGGCATTTAGCTATATGCACAGTCCTGGAGCTAGCTTACTGTTCATGTTCAGAAGTTCAGAATGTGATTGCAGCTGCTGCTCCTGATCGGAACGAAGCTGGAGCACATCATCACTCAGCTAGCCTACGAAGTGGCCACGAAGCACACCGCCGTGGAGGGGGACATAGCCGTGAGCCCGTCAGACAATCTCTTCTGGTTCCACAGCCCCAGGCTCGTGCTCGCCCTCCTCCACTTCATCCTGTTCCAGAACGCGTTCGAGTTTGCGTATTTCATCTGGACAATGGTAAGTGTAAAACAAAACGTACTCCCTCCGTCTCATTTTAAGCGTAGTTGTAGGCTTCTGTGTTTAACATTTAACTGTCCGTTTTATTTAAAAAACTTATAAAAAATAAGTCATACATAAAATACTATTTATATTTATCATCTAATAACAATAAAAATACTAATCGTAAAAAATTTTTTAAATAAGACGGACAATAAAACCTTGGATACGGAAACTTACAACTACACTTACTCCTAAGTTACTCCCTCTGTCTCCTCCTAATATAAGAGATTTTGATATTTTATTTGCACTGTTTGATCATTTGTCTTATTCAAAAAATTTAGAATTATTATTTATTTTTTTTGACTTACTTTATTATCCAAAGTACATTAAGAACAACTTTTCGTTTTCTATATTTGCACAAAATTTTTGAGTCAAACGAGCGGTCAAATAGTATAAGCAAAATATTAAAATTCTTTATATTATACTACGGAGGGAGTACTATCATGGGTTATCTGACATTTTCAGTTTCAGTGATCATCGTATCTGACATCCCTGTGCAGGCAACGTTCGGCTTCAACTCCTGCATCATGGACAGGCTGCCGTACAGAGTGTCAAGAATTGTCATATGGTAGCAAGAACCATCAATTTGGTTTCTCCTGTTTCAGATTAACAATCTCAGATTCAGAGATTCAGTTACCATCTGTTAGTTACATATCTCACGTTTATTTGCTTCTTTGTCCTGTCATGCAGCGTCGTCGTCCAGGTCCTCTGCAGCTACAGCACGCTCCCCCTCTACGCCATCGTCTCCCATGTCAGTATACATAATTGACACAATTAACTTTGACTTTTTTTTAAGTTAAACTTTGTTAAGTTTAACTAAGTTTATAGAAAAAAATTAGCAATATTTTAAACACCAAATTAGTTTCATTAAATTTAGTATTGTATTATATTTTAATAATAATAATTGTTTGTATTAAAAATACTACTATATTTTTCCATAAATATAGTCAAACGTAAAGAAATTTAATTAGGAAAAAAACCAAAACGACTTATAATATGAAACTGGGATTACTTATTCTAGACATAGATAAGCTAATGTTTTCCTTTTGTCCATGCAGATGGGGAGTTCGTTCAAGAGTGCCGTCTTCTCAGACGACGTCGCGGACAATCTAAGAGAATGGGCCGACGAAGCTCGGCGGCGCACAGGAAGAGCCGCCGCCGGTGTTGGCTGCCTAGGTGCGGCGGCAGGATCATCAAGGCGGGAAGGGATCACATACAAAACATGTGAGAGGGGCAACAAAAGGTACACAGTACTCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015017