BGIOSGA015039

From RiceWiki
Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015039| Description = cDNA clone:J023107F10, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA015039, complete gene.| ta...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015039

Description

cDNA clone:J023107F10, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA015039, complete gene.

LocusTag

OS04G0440300

Ensembl Transcript ID

BGIOSGA015039-TA

Ensembl Protein ID

BGIOSGA015039-PA

Length

1354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19911428..19912781

Sequence Coding Region

19911942..19912781,19911712..19911864,19911428..19911625

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19911428..19912781 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19911428..19912781 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTGGACACCACACGAAAGCGGCCCCGTGAAAGTGGCGTCGCCGTCGATCGGCTCAGCGCGTTGCCGGACTGCCTCCTCCATGTCATCATGTCCTTCATGAAGGCCAGGCAGGTGGTGCAGACGTGCATGCTGTCCAAGAGGTGGGAGCACCTCTGGCGCACCGTGCCGTGCCTCGATGTAGATCATCGGGAGTTCCAAAGCACAGGTGAAGCTGCACAGGGCGACAATGAGGTGTGGCAGAATTTTGAGGATTTTGCGGACAACCTGATGCTTCATCACCAGATTGCACACCTGGATACGTTCCAGCTGCATGTTAATAATGTGTATCGTTGGGGTCAACATGCATCTAGGTGGATTCGTCGCAGCATCAAGTATAACACCAAGGTTCCTGGCATTCCTCGCCCGGGATTGAGCTGCAGTTCTTGGAGCCTCAAAAGACTACATCTTTCTAACATTTGTCTGGATGATCTGTTCGCAAAGCACATTAGCTCAATGTGCTGCTCTCTGGAGGATTTGAATCTCAAAGGATGCAGATTTGCATTCAATGAGATCACGTCCCACTCACTGAAGAGCTTGGTGATCGACAGCTGCGACAGCAAGCTTTGTCCTTCCAAACTGGTTGTCACGGCTCCTGCCATTGCCTCCCTGTGCCTTATTGTGAAATTGTGGTTTTTCCCCGGCGGTCTCATTGTAAATGAAATGCCATTCCTTTCGAAAGCATCCATTCTTGTTTCAGCCACCTACGACGGAAAGAACTTCCAACACAATCAAAGCAAGTTTCTTGGTAGCCTCTGTAATGTGACAACTTTAGAGCTGTCAGGTTTTCAGACAATGATTATACCTGAGGAACCGGTTGAGTTACCAGAATTCAAGAACCTCAAGATCTTATCCCTTGACAAGTGTGATCTTAGTGACAACTTCCAGTTATTGAAGCACTTTCTGCAGAACTCGCCTAATTTGGAGAAGCTCACGTTGCGGCTTTGCGAGCTGCCAAAGGATTCTAAGAAAAGGAAAGGGAAGGCCAAGGCGAAGAAAACACGTTTGGTGGATATCCGGTGTGAGAACCTAAAGCTTACTGAAATCATCTACGATGCTGATGATGTCCTCCAACTGGTCGGGCTTTTGCTGAACGATTCAGCAAATCTTCCTAAGAACAACATAAAACTCAGCAAAGTTGATCGTTAG</cdnaseq>

Protein Sequence

<aaseq>MDLDTTRKRPRESGVAVDRLSALPDCLLHVIMSFMKARQVVQTCMLSKRWEHLWRTVPCLDVDHREFQSTGEAAQGDNEVWQNFEDFADNLMLHHQIAHLDTFQLHVNNVYRWGQHASRWIRRSIKYNTKVPGIPRPGLSCSSWSLKRLHLSNICLDDLFAKHISSMCCSLEDLNLKGCRFAFNEITSHSLKSLVIDSCDSKLCPSKLVVTAPAIASLCLIVKLWFFPGGLIVNEMPFLSKASILVSATYDGKNFQHNQSKFLGSLCNVTTLELSGFQTMIIPEEPVELPEFKNLKILSLDKCDLSDNFQLLKHFLQNSPNLEKLTLRLCELPKDSKKRKGKAKAKKTRLVDIRCENLKLTEIIYDADDVLQLVGLLLNDSANLPKNNIKLSKVDR</aaseq>

Gene Sequence

<dnaseqindica>1..840#918..1070#1157..1354#ATGGATCTGGACACCACACGAAAGCGGCCCCGTGAAAGTGGCGTCGCCGTCGATCGGCTCAGCGCGTTGCCGGACTGCCTCCTCCATGTCATCATGTCCTTCATGAAGGCCAGGCAGGTGGTGCAGACGTGCATGCTGTCCAAGAGGTGGGAGCACCTCTGGCGCACCGTGCCGTGCCTCGATGTAGATCATCGGGAGTTCCAAAGCACAGGTGAAGCTGCACAGGGCGACAATGAGGTGTGGCAGAATTTTGAGGATTTTGCGGACAACCTGATGCTTCATCACCAGATTGCACACCTGGATACGTTCCAGCTGCATGTTAATAATGTGTATCGTTGGGGTCAACATGCATCTAGGTGGATTCGTCGCAGCATCAAGTATAACACCAAGGTTCCTGGCATTCCTCGCCCGGGATTGAGCTGCAGTTCTTGGAGCCTCAAAAGACTACATCTTTCTAACATTTGTCTGGATGATCTGTTCGCAAAGCACATTAGCTCAATGTGCTGCTCTCTGGAGGATTTGAATCTCAAAGGATGCAGATTTGCATTCAATGAGATCACGTCCCACTCACTGAAGAGCTTGGTGATCGACAGCTGCGACAGCAAGCTTTGTCCTTCCAAACTGGTTGTCACGGCTCCTGCCATTGCCTCCCTGTGCCTTATTGTGAAATTGTGGTTTTTCCCCGGCGGTCTCATTGTAAATGAAATGCCATTCCTTTCGAAAGCATCCATTCTTGTTTCAGCCACCTACGACGGAAAGAACTTCCAACACAATCAAAGCAAGTTTCTTGGTAGCCTCTGTAATGTGACAACTTTAGAGCTGTCAGGTTTTCAGACAATGGTATGTATTCTGTCTTCACAGACTTGCTTCTTCTATACGTTTACCTTGTGGTGCCATTTCAGCATTATATATTTCAGATTATACCTGAGGAACCGGTTGAGTTACCAGAATTCAAGAACCTCAAGATCTTATCCCTTGACAAGTGTGATCTTAGTGACAACTTCCAGTTATTGAAGCACTTTCTGCAGAACTCGCCTAATTTGGAGAAGCTCACGTTGCGGCTTTGCGAGGTATTCATGCTCTTATTTTGGCCTTAACATTCTTACATAATTAAATTTGGCTCATTATTGGACATCCTTTACTATACTGCCAACAGCTGCCAAAGGATTCTAAGAAAAGGAAAGGGAAGGCCAAGGCGAAGAAAACACGTTTGGTGGATATCCGGTGTGAGAACCTAAAGCTTACTGAAATCATCTACGATGCTGATGATGTCCTCCAACTGGTCGGGCTTTTGCTGAACGATTCAGCAAATCTTCCTAAGAACAACATAAAACTCAGCAAAGTTGATCGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015039