BGIOSGA015040

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Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015040| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015040, complete gene.| tag = OsI_160...")
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Gene Name

BGIOSGA015040

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015040, complete gene.

LocusTag

OsI_16008

Ensembl Transcript ID

BGIOSGA015040-TA

Ensembl Protein ID

BGIOSGA015040-PA

Length

2902

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19904984..19907885

Sequence Coding Region

19907497..19907885,19906894..19907356,19905360..19905758,19904984..19905223

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19904984..19907885 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19904984..19907885 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATCGAGGGCTCCCGCAAGCGCAAGCGTACTCCCGCCGCCGCCGCCGCCGCCGAGGACCGGCTGAGCGAGCTGCCGGACTGCCTCCTCCACGACATCCTGTCCCACCTCAAGGCCCGGCAGGTGGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCGCCACCTCTGGCGCTCCGTGCCGCGCCTCGACGTCGACTGCAAGGATTTCTGGTCGCCGCCGCCGGCGTCGACGCAGCAGCAGCAGCAGCACGCGGCTCTGTTGGCGGCGGAGTTCGCCAGGTTCGAGGACTTCGCCGACAACCTCCTGCTCCGCCGGAGCGCCGCCGCGCCGCTGGACGCCCTGCGCCTGCGCGTCGACGAGCGATGCCAGCGCACCACCTACGGCAGGCTCTGCCTCGACGGCGTCACCCTCCCCGCGGGGTTCGACGCGATGCTCGCCTCGGGGTCGGGGCTCCCCGTCCTGGAGGACCTGGAGCTCAGGGCAGCCCACTACCCGTTCGCGCGGATCGCCTCCGCCACGCTCAAGAAGCTCGCCGTCGAGCGCTGCGGCGGCGGCGGCGCGGGCTACCTCACCAGCGACGACGGCGGCGTGGTCGTCATCTCCGCCCCGCGCCTCTCCTCGCTGCGCCTCGGCATCTACCTCGAGCCCAACTGGCCCGCCTTCGCCGTGGAGGGGCCCACGCCGTCCCTCGTCGAAGCATCGATCCAAGTCTTCCACGCCACCGCCATTGATGCACATGCACCTGAGCCGCAGATTACGCAGAGGATGAGCTTGCTGAAATCTCTTTGCAATCTGCTTGCTGGCATCTCCCACGTCAGTAGCCTAGAGCTGTCAGGCCTTCATGGACTGGTGATGCCATTGCAAGGAGAGGGAAATGATCCTTACAATCAAGCACCAGCAGGCCAGCACTATCATAATCCAGACAAGAACCTAGCTCAGTATTATCAAGCATTGCCTCCCATCTTTCAGTATCAACAACCAGTTCAGTATTATGATATACCACCACTCCATCCTCTCTTTCCACCTTATAATTACCAGCATCCTAATTGGGCGGCGCAACACCGTCAACCTATGCCCCTGTTGCAAACAATGCTGGATGACAACCATGGCGGATTGCCGGTGTTCTCTAACCTAACAACCATGGTGCTTCGCGAGTGCAATATCCATGTAAATGACAGCATGAAAATGCTGTGGCGTTTCCTGCAGAACACCCCTGCGCTGGAGAAGCTCACTCTTCAGAATTGCAAGTTCTCAAATGGTGCTGATGTTAGGAAACATGGTCCTAAGTTGAAGATCTCTTCCAGCTTAAAGTTTGTGGATATCATATACAAAGATGTGAATCACCATGATGGCGAAGAAGATGAGTATGAAGACGAAGATGAAGACAAAGATGAACATCCTGAGGAAGTTAATAAGGTTTTGTTCATAATGTCAAGAAAATTGAAAGATGTTACTGTCAAAGTTAAGAAAGTAGATGGATATCAATAG</cdnaseq>

Protein Sequence

<aaseq>MEIEGSRKRKRTPAAAAAAEDRLSELPDCLLHDILSHLKARQVVQTCVLSRRWRHLWRSVPRLDVDCKDFWSPPPASTQQQQQHAALLAAEFARFEDFADNLLLRRSAAAPLDALRLRVDERCQRTTYGRLCLDGVTLPAGFDAMLASGSGLPVLEDLELRAAHYPFARIASATLKKLAVERCGGGGAGYLTSDDGGVVVISAPRLSSLRLGIYLEPNWPAFAVEGPTPSLVEASIQVFHATAIDAHAPEPQITQRMSLLKSLCNLLAGISHVSSLELSGLHGLVMPLQGEGNDPYNQAPAGQHYHNPDKNLAQYYQALPPIFQYQQPVQYYDIPPLHPLFPPYNYQHPNWAAQHRQPMPLLQTMLDDNHGGLPVFSNLTTMVLRECNIHVNDSMKMLWRFLQNTPALEKLTLQNCKFSNGADVRKHGPKLKISSSLKFVDIIYKDVNHHDGEEDEYEDEDEDKDEHPEEVNKVLFIMSRKLKDVTVKVKKVDGYQ</aaseq>

Gene Sequence

<dnaseqindica>1..389#530..992#2128..2526#2663..2902#ATGGAGATCGAGGGCTCCCGCAAGCGCAAGCGTACTCCCGCCGCCGCCGCCGCCGCCGAGGACCGGCTGAGCGAGCTGCCGGACTGCCTCCTCCACGACATCCTGTCCCACCTCAAGGCCCGGCAGGTGGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCGCCACCTCTGGCGCTCCGTGCCGCGCCTCGACGTCGACTGCAAGGATTTCTGGTCGCCGCCGCCGGCGTCGACGCAGCAGCAGCAGCAGCACGCGGCTCTGTTGGCGGCGGAGTTCGCCAGGTTCGAGGACTTCGCCGACAACCTCCTGCTCCGCCGGAGCGCCGCCGCGCCGCTGGACGCCCTGCGCCTGCGCGTCGACGAGCGATGCCAGCGCACCACCTACGGCAGGTGGGTCCGCCGCGCCATGGTCATGCACGCGCCGGCGGCGCTCGAGGTCGTCCGCCACTACGGCGGCGGCGGCGCCGCGGCGCCGCTCTTCGCGGCGCTGCCGCTGTCCTGCCCTCCGGCTGCCACCGCCGCCTCACGAGGCTCTGCCTCGACGGCGTCACCCTCCCCGCGGGGTTCGACGCGATGCTCGCCTCGGGGTCGGGGCTCCCCGTCCTGGAGGACCTGGAGCTCAGGGCAGCCCACTACCCGTTCGCGCGGATCGCCTCCGCCACGCTCAAGAAGCTCGCCGTCGAGCGCTGCGGCGGCGGCGGCGCGGGCTACCTCACCAGCGACGACGGCGGCGTGGTCGTCATCTCCGCCCCGCGCCTCTCCTCGCTGCGCCTCGGCATCTACCTCGAGCCCAACTGGCCCGCCTTCGCCGTGGAGGGGCCCACGCCGTCCCTCGTCGAAGCATCGATCCAAGTCTTCCACGCCACCGCCATTGATGCACATGCACCTGAGCCGCAGATTACGCAGAGGATGAGCTTGCTGAAATCTCTTTGCAATCTGCTTGCTGGCATCTCCCACGTCAGTAGCCTAGAGCTGTCAGGCCTTCATGGACTGGTACGCGTCAAATCCTTCAATTCTCAATATATATAGGGAGTGGATTCTAATCCCTCGAGGGGATATCCCCTCGTATACCTTTTTCTTCTAAATTCGATGCAAATAGTTGTGAAAAAATCTGAAAAAAATTGACAATGTAGAGTATAATGATACCTATTAGTCCACCAAAATTCATGTTCAAATTCGATCTACACATCGAGAAACAAAAAAGACAAATTTAGATATAAACAGTACACTACTATTCATACGCTGAATTTGTCTTTTTTATATCTCGACGTGTGAGTTGAGTTTGGACTTAAGATTTTGTGAAGTTGTATATATGTGTTGTATGAATGTTGTCAAATTTTTCCAGAATTTTTCATAACCATTTAGATGGTTTTTGAGCAAACGAGGGAACATCCCCTCGAGGGATTAGAATAGTTTCCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTGAAAATACCACTATTTTTTTCTATAAACTCTTTCAAAGTTGAAGAATTTTGACTAGGGAAAGAGTAAAACGACTTATAATATGAAAATGAGGGAGTACTTCGTTTTGAAACATCTGTGCCAAAGGAGTATTTCAGAAATTTCAGAACAACATTTTTTTTGAATTCTTAACAAATTTTGGTCAAATTTAAATAGATTTCTACCAAATTTAAAAACAAGAAGGAAAATTCGGGAAAAATAGTTTCATGCCAATACCGAGGATGCAAACATTTACTTCTGGCACTGAAACCGAACCGTATAAAATAAAAGAGAAATGTTACTATCCTTGAGGAGATATCAAGGAGTATCATAGTCGTATATCGTCCTAAAGAGAGATCGGACATTGAGAGGTGCCGTATATAGTATTTCGTAAAATTTGGTGCCTCAAGGACATAACAAAGACTCTAGAGGGATTGTTCCTGTTACATTATCATTGATTTGGTAATTCTGAACTAATTAACTGTTCCTATAATTAACTAGCTACTCCTGGTTTTCTGTATTTCAGGTGATGCCATTGCAAGGAGAGGGAAATGATCCTTACAATCAAGCACCAGCAGGCCAGCACTATCATAATCCAGACAAGAACCTAGCTCAGTATTATCAAGCATTGCCTCCCATCTTTCAGTATCAACAACCAGTTCAGTATTATGATATACCACCACTCCATCCTCTCTTTCCACCTTATAATTACCAGCATCCTAATTGGGCGGCGCAACACCGTCAACCTATGCCCCTGTTGCAAACAATGCTGGATGACAACCATGGCGGATTGCCGGTGTTCTCTAACCTAACAACCATGGTGCTTCGCGAGTGCAATATCCATGTAAATGACAGCATGAAAATGCTGTGGCGTTTCCTGCAGAACACCCCTGCGCTGGAGAAGCTCACTCTTCAGAATTGCAAGGTAAACAGCATGCAAACTTTTATTTCCTTTTAGTTAATTTACCTTGCAATATATGTATACATCTTTAGAATTTTGACTCTATTAATATTTGCTTTGGTTTTACTAATTAATATACATTTGTCGTTGCCGAAAATAGTTCTCAAATGGTGCTGATGTTAGGAAACATGGTCCTAAGTTGAAGATCTCTTCCAGCTTAAAGTTTGTGGATATCATATACAAAGATGTGAATCACCATGATGGCGAAGAAGATGAGTATGAAGACGAAGATGAAGACAAAGATGAACATCCTGAGGAAGTTAATAAGGTTTTGTTCATAATGTCAAGAAAATTGAAAGATGTTACTGTCAAAGTTAAGAAAGTAGATGGATATCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015040