BGIOSGA015160

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Revision as of 04:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015160| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015160, complete gene.| tag = OsI_157...")
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Gene Name

BGIOSGA015160

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015160, complete gene.

LocusTag

OsI_15753

Ensembl Transcript ID

BGIOSGA015160-TA

Ensembl Protein ID

BGIOSGA015160-PA

Length

5714

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17723823..17729536

Sequence Coding Region

17729491..17729536,17728857..17729117,17727079..17727933,17726846..17727010,17725728..17726384
,17725445..17725554,17725308..17725361,17724260..17724277,17724100..17724177
,17723823..17723993

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17723823..17729536 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17723823..17729536 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCCAGGGCTGCGAAGTGAAGGTGCACGATCTCATGTATACAATTACGAAGATGAAGAATTCAGCATTGAGATGCACCACGGAGGCTTTTTTATGGGAAATGGTGTAAACCGGGCTTATGTTGATGGTAGAGTAAACTGGTTTGACCATTGTGAGTCAGATTCTTGGTCACTGTTGTGGGTTGATGATTTCATTGAAGAACTAGGATATGAGAAATCTGATAACACCAAAATTTATTGGTTGCTTCCTGGCAAACAATTAAGTGATGGGTTGAGAAGGGTTAAGTGTGATGCAGACACTAATAATTCCGAAGATGAAGAATTCAGCATTGAGATGCACCACGGAGGCTTTTTTATGGGAAATGGTGTAAACCGGGCTTATGTTGATGGTAGAGTAAGCTGGTTTGACCATTGTGAGTCAAATTCTTGGTCACTGTTGTGGGTTGATGATTTCATTGAAGAACTAGGATATGAGAAATCTGATAACACCAAAATTTACTGGTTGCTTCCTGGCAAACAATTAAATGATGGGTTGAGGAGGGTTAAGTGTGATGCAAACACTAATAGTATGGTCGCTCTTGTACCTAGGGTCCGATCATTTGTTTTGTATGCAGATCATCAAGACATAGTCGACGCTAGTGACTTAGATGATGTGGCAATTATTGGTTCAGATCCTTTGCGTACTGCTGTGAAACCAAGTAAAATAATTAGGGCTAAGAGTGATGGTGGGGAGTTGATTGTAGATAAATGTGCTACCTACTCTAAAATTGATGAGGAAGAGGAGTCAAGAATTGAAGATCCAGATTTTGTTGATAGTGATTATGAGATCGATCATGGGGATGATGACTTGTTTGATAATTGTGTTGAAGGCCAAATTGAGTTAGCGCATAATAAAGAGGAGGGTTCAGACTATGGTTCATCTGAAGATGAAAGGTTGATGATGCCAGATATTTCTGAAGAAGAAGAAGAAGAAATTAAGTTCAGTTTTAAGAGTTTTAGGGCTGATGTAGACATGGAGACACCTGAGTTCAAGGTTAGCATGATGTTTGCAGATGTTGTAGAGCTTAGGAAAGCAATAGATCAGTATACTATAAAGAACCGAGTTGCTATTAAGAAGACACGGAATACCCAAACTAGAATTGAAGCTAAGTGTGCTGAAGAGAAGCACACCTGCTCTAAACGGTGGGAGATCAAGGTCGTCACAGCTAAGTATCATGCAAAAAGGTACATTGAGGAGTTTAGAGATAATGACAAAATGACACTGATGAGCTTTGCTAAGAAAATTCAGAAGGAACTCCACTTAACACCATCTAGGCACAAGCTAGGGAAAATTGAGTTAGCGCATAATAAAGAGGAGGGTTCAGACTATGTTTCATCTGAAGATGAAAGGTTGATGATGCCAGATATTTCTGAAGAAGAAGAAGAAAAAATCAAGTTCAGTTTTAAGAGTTTTAGGGCTAATGTAGACATGGAGACACCTGAGTTTAAGGTTAGCATGATGTTTGCAGATGTTGTAGAGCTTAGGAAAGCAATAGATCAATATACTATAAAGAACCAAGTTGCTATTAAGAAGACACGGAATACCAAAACAAGAATTGAAGCTAAGTGTGCTGAAGGTTGTCCATGGATGTTGTCTGCATCTATGGATAATAGAGTCAAATGCTTAGTGGTAAGGGAATATATAGAGAAGCACACCTGCTCTAAACAGTGGGAGATCAAGGCCGTCACAGCTAAGTATCTTGCAAAAAGGTACATTGAAGAATTTAGAGATAATGACAAAATGACACTGATGAGCTTTGCTAAGAAAATTCAGAAGGAACTCCACTTAACACCATCTAGGCACAAGCTAGGTAGAGCTAGAAGGATGGCTATGAGGGCCATATATGGAGATGAAATATCTCAGTACAACCAATTATGGGACTATGGACAAGAATTGAGAACCTCTAACCCAGGGAGCTCATTCTACCTGAACCTACATTTTGTAGTTGAAGTTGAGAGCTTGAAAAGCTGGAGTTGGTTTCTTGACACTCTAAAAAAGGACCTTGGCATTGAGAATACATCTGCATGGACAGTGATGACTGATAGGCAGAAGGGGCTTGTTCCAGCTGTGAGAAGGGAGTTTTCTGATGCTGAACAAAGATTCTGTGAACCTGTCATCACTCAGGAAATGCACCTGCTCAGCATACCCCAGAAAAATTCTAACTATCTGAGTTCATCTGTGGTGGAAGCTTTTATTAAGGAGGCTGCTAGCAAACATCAAGAAAGGGTGCCAGAGTCTGCTTTCATTGCTACTAATAGGAGAGAAGGGGTTCAACCACCACTAACCACATCAACCAAACAAGGGAGGGCCACATTGAGGAAGAGAAGTGCAGCACCCAAGAAGAAAAACTCTCCCAAGAAAAAGAAACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MVPGLRSEGARSHVYNYEDEEFSIEMHHGGFFMGNGVNRAYVDGRVNWFDHCESDSWSLLWVDDFIEELGYEKSDNTKIYWLLPGKQLSDGLRRVKCDADTNNSEDEEFSIEMHHGGFFMGNGVNRAYVDGRVSWFDHCESNSWSLLWVDDFIEELGYEKSDNTKIYWLLPGKQLNDGLRRVKCDANTNSMVALVPRVRSFVLYADHQDIVDASDLDDVAIIGSDPLRTAVKPSKIIRAKSDGGELIVDKCATYSKIDEEEESRIEDPDFVDSDYEIDHGDDDLFDNCVEGQIELAHNKEEGSDYGSSEDERLMMPDISEEEEEEIKFSFKSFRADVDMETPEFKVSMMFADVVELRKAIDQYTIKNRVAIKKTRNTQTRIEAKCAEEKHTCSKRWEIKVVTAKYHAKRYIEEFRDNDKMTLMSFAKKIQKELHLTPSRHKLGKIELAHNKEEGSDYVSSEDERLMMPDISEEEEEKIKFSFKSFRANVDMETPEFKVSMMFADVVELRKAIDQYTIKNQVAIKKTRNTKTRIEAKCAEGCPWMLSASMDNRVKCLVVREYIEKHTCSKQWEIKAVTAKYLAKRYIEEFRDNDKMTLMSFAKKIQKELHLTPSRHKLGRARRMAMRAIYGDEISQYNQLWDYGQELRTSNPGSSFYLNLHFVVEVESLKSWSWFLDTLKKDLGIENTSAWTVMTDRQKGLVPAVRREFSDAEQRFCEPVITQEMHLLSIPQKNSNYLSSSVVEAFIKEAASKHQERVPESAFIATNRREGVQPPLTTSTKQGRATLRKRSAAPKKKNSPKKKKQ</aaseq>

Gene Sequence

<dnaseqindica>1..46#420..680#1604..2458#2527..2691#3153..3809#3983..4092#4176..4229#5260..5277#5360..5437#5544..5714#ATGGTGCCAGGGCTGCGAAGTGAAGGTGCACGATCTCATGTATACAGTGAGTACTTTAGTTTATCAGGTCAAAAATGAGATTGTCTTTCTCAATTCCAATTTTTGTAGAGATTTCTTCCTCTTATTGTCGATTTATTAGGTATTGCAAACAAGAAGGACTATCAGTTGTTTTAATTTATGCCAGGAGCTAGTTCATGGTACACAAAAGCTGTAATTTTTGTTGACATTTATGGTATAGAAGTGATCACGGCAAATTTGTATTTTTGGAGAGCAATTTGATCATTAATGTACTGCTAGTTTCTGTTGTTAACTATGCTTTCTTCCTGGATATACCCTTAAACATGGATATACCCTTAAACATCTGAACCTAAAGTAAACTGTTCTGACGATGAATAATTATCTGTACACAACATATGTAGATTACGAAGATGAAGAATTCAGCATTGAGATGCACCACGGAGGCTTTTTTATGGGAAATGGTGTAAACCGGGCTTATGTTGATGGTAGAGTAAACTGGTTTGACCATTGTGAGTCAGATTCTTGGTCACTGTTGTGGGTTGATGATTTCATTGAAGAACTAGGATATGAGAAATCTGATAACACCAAAATTTATTGGTTGCTTCCTGGCAAACAATTAAGTGATGGGTTGAGAAGGGTTAAGTGTGATGCAGACACTAATAGTATGGTCGCTCTTGTACCTAGGGTCCGATCATTTGTTTTGTATGCAGATCATCAAGACATAGTTGACGCTATTGACTTATATGATGTGGCAATTATTGGTTCAGATTCTTGCGTACTGTTGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATGCCACATCAGGCGCTACACAGCGTTATGTGGGGGCGTGAGCTGGCTACACATATTTGCAAATAACCCCTCATACATCTTTCGATTCCTCTAAACCTCCTTTTGTGTTGTAGCCCACGATGATGCCCATGCTAGAGATCAGTTTCCTGATCGCCTGACGCCAATTGAGTTAGCAACAGAAAGAGATAAATCAGGAGATTGATATTTGGATCAAGGTTGAAGGCGGCGAATTGGATCCAGGCGGTAGGGCTTTGCAGGGAGACACCGCGCCGGCCACGTTTAGGGCAGTGGTGGTAGGACGTTGCCGCCGGCACTGAGGCAACATGGTACCAGGGCTGCGAAGTGAAGGTGCACGATCTCCTGTATACAATGAGTACTTTAGTTTATAAGGTTAAAAATGAGATTGTCTTTCTCAATTCCAATTTTTGTGGAGATTTGTTCCTCTTATTGTTGATTTATTAGGTATTGCAAACGAGAGGACTATCGATCAATTGTTTTAATTTATGCCAGGATCTAGTTCATGGTACACAAAAGCTGTACTTTTTATTGACGTTTATGGTATAGCAGTGATTATGGCAAATTAGTATTTTGAGTACTCTAGTATTTTTGGAGAGCAATTTGATTATTAATGTACTGCTAGCTTTTGTTGTTAACTATGCCTTCTTCCTGGACATACCCTTAAACATCTGAACCTAAAGTAAACTGTTCTGAAGATGAATAATTCTCTGTACACAATATATGTAGATTCCGAAGATGAAGAATTCAGCATTGAGATGCACCACGGAGGCTTTTTTATGGGAAATGGTGTAAACCGGGCTTATGTTGATGGTAGAGTAAGCTGGTTTGACCATTGTGAGTCAAATTCTTGGTCACTGTTGTGGGTTGATGATTTCATTGAAGAACTAGGATATGAGAAATCTGATAACACCAAAATTTACTGGTTGCTTCCTGGCAAACAATTAAATGATGGGTTGAGGAGGGTTAAGTGTGATGCAAACACTAATAGTATGGTCGCTCTTGTACCTAGGGTCCGATCATTTGTTTTGTATGCAGATCATCAAGACATAGTCGACGCTAGTGACTTAGATGATGTGGCAATTATTGGTTCAGATCCTTTGCGTACTGCTGTGAAACCAAGTAAAATAATTAGGGCTAAGAGTGATGGTGGGGAGTTGATTGTAGATAAATGTGCTACCTACTCTAAAATTGATGAGGAAGAGGAGTCAAGAATTGAAGATCCAGATTTTGTTGATAGTGATTATGAGATCGATCATGGGGATGATGACTTGTTTGATAATTGTGTTGAAGGCCAAATTGAGTTAGCGCATAATAAAGAGGAGGGTTCAGACTATGGTTCATCTGAAGATGAAAGGTTGATGATGCCAGATATTTCTGAAGAAGAAGAAGAAGAAATTAAGTTCAGTTTTAAGAGTTTTAGGGCTGATGTAGACATGGAGACACCTGAGTTCAAGGTTAGCATGATGTTTGCAGATGTTGTAGAGCTTAGGAAAGCAATAGATCAGTATACTATAAAGAACCGAGTTGCTATTAAGAAGACACGGAATACCCAAACTAGAATTGAAGCTAAGTGTGCTGAAGGTTGTCCATGGATGTTGTCTGCATATATGGATAATAGAGTTAATGCTTAGTGGTAAAGTAATATGTAGAGAAGCACACCTGCTCTAAACGGTGGGAGATCAAGGTCGTCACAGCTAAGTATCATGCAAAAAGGTACATTGAGGAGTTTAGAGATAATGACAAAATGACACTGATGAGCTTTGCTAAGAAAATTCAGAAGGAACTCCACTTAACACCATCTAGGCACAAGCTAGGTAGAGCTAGAAGGATGGCTATGAGGGCCATATATGGAGATGAAATATCTTAGTACAACCAATTATGAGACTATGGACAAGAATTGACAACCTCTAACCCAGGGAGCTCATTCTACCTGAACCTACATTCTGGTTGCTTCCATACTTTGCATATGTCATTCGATGCTTGCAAGAGAGGGTTTACGTCTAGGTGTAGACCTATCATTTGCATTGATGGATGCCATATTAAAACAAAATTTGGCGGCCATATCCTAACTGTTGTTGGTATGGACCCAAATGACTGCATTTTTCCCATTGCAATTGCGGTAGTTGAAGTTGAGAGCTTGAAAAGCTGGAGTTGGTTTCTTGACACTCTAAAAGAAGACCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGATCATGGGGATGATGACTTGTTTGATAATTGTGTGAAGGGAAAATTGAGTTAGCGCATAATAAAGAGGAGGGTTCAGACTATGTTTCATCTGAAGATGAAAGGTTGATGATGCCAGATATTTCTGAAGAAGAAGAAGAAAAAATCAAGTTCAGTTTTAAGAGTTTTAGGGCTAATGTAGACATGGAGACACCTGAGTTTAAGGTTAGCATGATGTTTGCAGATGTTGTAGAGCTTAGGAAAGCAATAGATCAATATACTATAAAGAACCAAGTTGCTATTAAGAAGACACGGAATACCAAAACAAGAATTGAAGCTAAGTGTGCTGAAGGTTGTCCATGGATGTTGTCTGCATCTATGGATAATAGAGTCAAATGCTTAGTGGTAAGGGAATATATAGAGAAGCACACCTGCTCTAAACAGTGGGAGATCAAGGCCGTCACAGCTAAGTATCTTGCAAAAAGGTACATTGAAGAATTTAGAGATAATGACAAAATGACACTGATGAGCTTTGCTAAGAAAATTCAGAAGGAACTCCACTTAACACCATCTAGGCACAAGCTAGGTAGAGCTAGAAGGATGGCTATGAGGGCCATATATGGAGATGAAATATCTCAGTACAACCAATTATGGGACTATGGACAAGAATTGAGAACCTCTAACCCAGGGAGCTCATTCTACCTGAACCTACATTTTGGTTGCTTCCATACTTTGTATATGTCATTCGATGCTTGCAAGAGAGGGTTTATGTTTGGGTGTAGACCTATCATTTGTCTTGATGGATGCCATATTAAAACAACTTTGGTGGCCATATCCTAACTGCTGTTGGTATGGACCCAAATGACTGTATTTTTCCCATTGCAATTGCAGTAGTTGAAGTTGAGAGCTTGAAAAGCTGGAGTTGGTTTCTTGACACTCTAAAAAAGGACCTTGGCATTGAGAATACATCTGCATGGACAGTGATGACTGATAGGCAGAAGGTATGACTTTGTCTGATTTTTTTCATAATATACATAACTCACATTTTAGTTCCTAACTATAATTCTTGATAATTCGTTTCCAGGGGCTTGTTCCAGCTGTGAGAAGGGAGTTTTCTGATGCTGAACAAAGATTCTGTGTGAGGCATCTATATCAAAATTTTCAAGTGTTACATAAAGGGGAGACACTAAAGAACCAACTTTGGGCTATTGCAAGATCTAGCACTGTGCCTGAGTGGAATGCCAATATGGAAAAGATGAAGGCATTAAGTAGTGAAGCTTATAAGTACCTTGAAGAAATTCCTCCAAACCAATGGTGTCGAGCCTTTTTCAGTGACTTTCCGAAGTGTGATATCCTTCTTAACAATAACTCAGAAGTGTTTAACAAGTACATTCTTGATGCCAGGGAGATGCCTATTTTGTCTATGCTTGAGAGGATTAGAAATCAGATCATGAACAGGTTGTACACCAAGCAAAAAGAACTAGAAAGGAATTGGCCATGTGGCATCTGCCCAAAAATAAAATGGAAGGTCGAGAAAAATACAGAGATGGCTAATACATGCTATGCTTTGCCTGCTGGGATGGGAGCATTTCAGGTTAGCGATAGAGGATCTCAATACATTGTTGAACTTAATGTAAAGAGATGTGATTGTAGGAGGTGGCAGCTCACTGGGATTCCTTGTAACCATGCCATTTCCTGTCTAAGACATGAAAGGATCAAGCCAGAGGATGTAGTGTCATTTTGCTATTCAACCAGGTGCTATGAACAAGCTTATAGCTACAACATAATGCCACTAAGAGATAGTATCCACTGGGAGAAGATGCAGGGTATAGAGGTGAAGCCACCAGTATATGAGAAGAAAGTGGGGAGGGCAAAGAAAACTAGAGAAAACAGCCCCAAGAACTAGAGGGTGGGACTAAAATTTCAAAGCATGGAGTAGAGATGCATTGTAGCTACTGCAAAAATGGTGGTCACAACAAAACTAGTTGTAAAAAGAGGAAGGCGTGACTTAAAACTTCAGAAGCAACCTATACAGCAAATGGCGACTTCATCAATTGTTGATGAAGAAGAGCTTGTCATCACTTGGGTAATATTTATACTTATTTTGCTTGTTTATTTGTTTATCTCCACTAACTATGAATTTTAAACTCATTGTATATTTGTTTCAGGAACCTGTCATCACTCAGGTACTATTGATGCTCATTTTGCTTGTGTATATATTTAGCTGCACTAACAAGGAATTTTAAACAGAACATATATTTGTTTCAGGAAATGCACCTGCTCAGCATACCCCAGAAAAATTCTAACTATCTGAGTTCATCTGTGGTGGAAGCTTTTATTAAGGAGGTGACAGTCCTTCATTAAGTTCTCAAAGAAAAAACAATCCTTCATTAAGCTAGCATTTTGTCAGCTAATAGCAACCATCATAAAATTAGTACATAATCTTTTACAGGCTGCTAGCAAACATCAAGAAAGGGTGCCAGAGTCTGCTTTCATTGCTACTAATAGGAGAGAAGGGGTTCAACCACCACTAACCACATCAACCAAACAAGGGAGGGCCACATTGAGGAAGAGAAGTGCAGCACCCAAGAAGAAAAACTCTCCCAAGAAAAAGAAACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015160