BGIOSGA015339

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Revision as of 04:12, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015339| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015339, complete gene.| tag = OS04G02...")
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Gene Name

BGIOSGA015339

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015339, complete gene.

LocusTag

OS04G0201000

Ensembl Transcript ID

BGIOSGA015339-TA

Ensembl Protein ID

BGIOSGA015339-PA

Length

5120

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12864132..12869251

Sequence Coding Region

12869243..12869251,12866718..12868991,12864132..12864170

Genome Context

<gbrowseImage1> name=IndicaChromosome04:12864132..12869251 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:12864132..12869251 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGGTAATTACCGCAGAGAATGTTGCTGAGGCTGTTGATAGTATAATTGACAAACTAAAGAAATCAGATGTATCAAATGTGGTCTACTTTGATGGTTGGGAAGGATTGGGTGCATCTGCTGTCCTCAGAGCTGTTGCCAAACGGCTTACAACGGTCCAGATCGCAGACCCAGAATTGAAGTTTGAAAAGATAATCCACATTGATTGCTCGAGGTGGAAAAGCAGAAGGGAAATGCAGAGGAAAATTGCAGAGAAACTAGAGATGACCCAAGCAAAAGATCTTATTGATGAGCAGGATGAGGCTGATGATATCAATGGAAAAGATGAAAGCTCCAGAGACGTGATCAATGATGTTGGAATAGCTGTTAATGATGTCCTAATGAGTAGAAGATTTCTTGTGGTTTTTCATAATGGGAGTGATAATGAAATAAAAGATGTAACTAATTTTGGTCTGCCTCTATATCAACCGTATAAGGGAAACAAAATATTGTGGACCTTCAGGGGCAGGTTTCGGCTGAGTACCAGAATTCAGGACAAGGTGCAAGTGGCAGATGTTTTTCTTGCTGCCGAATTCCATAACAAAATATATGGGATGGAGTTCCAGGATCAAAGCCATTGGTGGGATATATTGTGTGAGGAGGCGGCAGAAATTGCTTCCAACACATGTTCCGGAGTAGCCAAGCTGCACCCAACAACAATTGCCAAATGTTGGTTGTATATATCGAAACTTAATTTTGTTGGCAGAGACATCATTGACTATGACTGGGCAGTTCATGCTTCAAACTATTGGGTGTGTGATGGGATCATTCAGGAATGGGAGATTGCTGATGCTCTACAACAAGAGATGTGGCAAGAATGGGACGACCCTGGACTTTACCACATGATGCGGAACACTGACAACTGGATTTCAACAAATCACCTGATTTCAAGTAATTATGGGTTCCTGGCTGCCTCAGCAGTGGCTCAAACAGTGTCATCATTTTTCTTGGCAGCACACCAAATTGACACAGAATCAAAAGACACGGTGGAACTAGTAGAATATTTTTTTAAGTCAAAGCTCAACCTTGCACATCTTTTACAAAATTATAATGACATGTTTCAACATGCAGAGAACCTTAGAGTGCTAAAACTTAGCCTCTGTACTTTTAGATTTGCTTCACCTCCTTTCCTCTGTTGCCGCGGATTGAGATTCCTTGGGCTTGATAACTGCCTTGATCTGAACATTGATGCTGGAGAGGAGGTTCAGTCTTGGAACTGTTTTCATGGTTTGTGGGTGCTAGACCTACAGTACACACAGTGGGTTTTCTCCCCACAGATGATTGAGGAAATGAACAATGTCAGGGAGCTCAATGTTGAGGGAGTGAAACCGCACAACTTGAGACATATTTGGAAACGGCAGCATAACAAGATACAGAAGCTTCGTGTAATCAAGATGATTGATCAAGACTATACGGCAACCAAAGATGAAAAGGATCCATTCACATTCATATTCTCAGGTATGGAAAAGATGGAGATTCTAGACTTGTCAGGTAACTCTACCATGCAAGCTTTTCCTGACCTGTCCAAGGCAACATGTCTGAAGACTGTCACTCTTGATGGTTGTGTTGGGTTGGATTCTGTCATTGATAGCAACCTTCCGGTATCACTTGAGGAATTCAGCTTAGTTGCAGCATCAGAACAGTATCCAAAGGCAGCAAATATTACAAAAATCTCATTATTTGGATGTTGCCGGTTAAAAAAGCTAATCTTGAGTGGACTGCCAAAACTTGAGGAATTGGATCTTTCCGGCACAATATTGGAAAAACTTGACCTGGATGCCATGCAGGCAGAAAAACTTAATCGTCTTCTTCTGTTTGGTTGTCTGCATCTTTGTGCAATAAAGTGGTCAGATGTTACAAAACCACAATTGGATGAGTTACATGTAGATACAGTTGGAGTACATCTGGAAGGCAAACGACAAAATAGCTTGTCACCTGTCCAGGATGATGATAAATTATTCCAATCACATGTTGTTATCATGGATCCTAGGCTTCTTCGGTTTCTACAGTTGTTTGCAATGCAAAGTCACCATGTGCATTTCTGCATCTCACCTGTTTTTGTTAATTATAGCAAAGATGAAGGAGAAAGTAAGCAGTGCAGTAGTGCCTATGTTGATCGAACAGTTGCAGGGAATATGTACAGTGATATATTTGACAGAGTTGTTGCACTTAGTGTTGCCCCTGTGATTTGTCCTTGCCCGCGGCTGCCTTTAGAGTCAAAGTGCAACGGAAGCTGCAAGGTAGATTCAATTGACTACAACGGTCACCGACATCGATGA</cdnaseq>

Protein Sequence

<aaseq>MDEVITAENVAEAVDSIIDKLKKSDVSNVVYFDGWEGLGASAVLRAVAKRLTTVQIADPELKFEKIIHIDCSRWKSRREMQRKIAEKLEMTQAKDLIDEQDEADDINGKDESSRDVINDVGIAVNDVLMSRRFLVVFHNGSDNEIKDVTNFGLPLYQPYKGNKILWTFRGRFRLSTRIQDKVQVADVFLAAEFHNKIYGMEFQDQSHWWDILCEEAAEIASNTCSGVAKLHPTTIAKCWLYISKLNFVGRDIIDYDWAVHASNYWVCDGIIQEWEIADALQQEMWQEWDDPGLYHMMRNTDNWISTNHLISSNYGFLAASAVAQTVSSFFLAAHQIDTESKDTVELVEYFFKSKLNLAHLLQNYNDMFQHAENLRVLKLSLCTFRFASPPFLCCRGLRFLGLDNCLDLNIDAGEEVQSWNCFHGLWVLDLQYTQWVFSPQMIEEMNNVRELNVEGVKPHNLRHIWKRQHNKIQKLRVIKMIDQDYTATKDEKDPFTFIFSGMEKMEILDLSGNSTMQAFPDLSKATCLKTVTLDGCVGLDSVIDSNLPVSLEEFSLVAASEQYPKAANITKISLFGCCRLKKLILSGLPKLEELDLSGTILEKLDLDAMQAEKLNRLLLFGCLHLCAIKWSDVTKPQLDELHVDTVGVHLEGKRQNSLSPVQDDDKLFQSHVVIMDPRLLRFLQLFAMQSHHVHFCISPVFVNYSKDEGESKQCSSAYVDRTVAGNMYSDIFDRVVALSVAPVICPCPRLPLESKCNGSCKVDSIDYNGHRHR</aaseq>

Gene Sequence

<dnaseqindica>1..9#261..2534#5082..5120#ATGGACGAGGTGGGGGACGGTGGCTGCGGCAACAAGTCTCCACATCACCAGCCTCGCCTACATCAGCATACCTAGTTTGGTGACAGCTCAAAGTGGAGTATAGCAAATAAGGATTTCCCCCCCTCTAAATATATAGTTTCATTTTTTTTTCTCTGAATATAGTGTTCATTTGATTTTTCTTCTTCTAGACAGTCGTGTTACTTTGTACGCAACCCAGCTGAGCTGAGCTAACCTCAGTTAATTACTGTTAACCACTGCAGGTAATTACCGCAGAGAATGTTGCTGAGGCTGTTGATAGTATAATTGACAAACTAAAGAAATCAGATGTATCAAATGTGGTCTACTTTGATGGTTGGGAAGGATTGGGTGCATCTGCTGTCCTCAGAGCTGTTGCCAAACGGCTTACAACGGTCCAGATCGCAGACCCAGAATTGAAGTTTGAAAAGATAATCCACATTGATTGCTCGAGGTGGAAAAGCAGAAGGGAAATGCAGAGGAAAATTGCAGAGAAACTAGAGATGACCCAAGCAAAAGATCTTATTGATGAGCAGGATGAGGCTGATGATATCAATGGAAAAGATGAAAGCTCCAGAGACGTGATCAATGATGTTGGAATAGCTGTTAATGATGTCCTAATGAGTAGAAGATTTCTTGTGGTTTTTCATAATGGGAGTGATAATGAAATAAAAGATGTAACTAATTTTGGTCTGCCTCTATATCAACCGTATAAGGGAAACAAAATATTGTGGACCTTCAGGGGCAGGTTTCGGCTGAGTACCAGAATTCAGGACAAGGTGCAAGTGGCAGATGTTTTTCTTGCTGCCGAATTCCATAACAAAATATATGGGATGGAGTTCCAGGATCAAAGCCATTGGTGGGATATATTGTGTGAGGAGGCGGCAGAAATTGCTTCCAACACATGTTCCGGAGTAGCCAAGCTGCACCCAACAACAATTGCCAAATGTTGGTTGTATATATCGAAACTTAATTTTGTTGGCAGAGACATCATTGACTATGACTGGGCAGTTCATGCTTCAAACTATTGGGTGTGTGATGGGATCATTCAGGAATGGGAGATTGCTGATGCTCTACAACAAGAGATGTGGCAAGAATGGGACGACCCTGGACTTTACCACATGATGCGGAACACTGACAACTGGATTTCAACAAATCACCTGATTTCAAGTAATTATGGGTTCCTGGCTGCCTCAGCAGTGGCTCAAACAGTGTCATCATTTTTCTTGGCAGCACACCAAATTGACACAGAATCAAAAGACACGGTGGAACTAGTAGAATATTTTTTTAAGTCAAAGCTCAACCTTGCACATCTTTTACAAAATTATAATGACATGTTTCAACATGCAGAGAACCTTAGAGTGCTAAAACTTAGCCTCTGTACTTTTAGATTTGCTTCACCTCCTTTCCTCTGTTGCCGCGGATTGAGATTCCTTGGGCTTGATAACTGCCTTGATCTGAACATTGATGCTGGAGAGGAGGTTCAGTCTTGGAACTGTTTTCATGGTTTGTGGGTGCTAGACCTACAGTACACACAGTGGGTTTTCTCCCCACAGATGATTGAGGAAATGAACAATGTCAGGGAGCTCAATGTTGAGGGAGTGAAACCGCACAACTTGAGACATATTTGGAAACGGCAGCATAACAAGATACAGAAGCTTCGTGTAATCAAGATGATTGATCAAGACTATACGGCAACCAAAGATGAAAAGGATCCATTCACATTCATATTCTCAGGTATGGAAAAGATGGAGATTCTAGACTTGTCAGGTAACTCTACCATGCAAGCTTTTCCTGACCTGTCCAAGGCAACATGTCTGAAGACTGTCACTCTTGATGGTTGTGTTGGGTTGGATTCTGTCATTGATAGCAACCTTCCGGTATCACTTGAGGAATTCAGCTTAGTTGCAGCATCAGAACAGTATCCAAAGGCAGCAAATATTACAAAAATCTCATTATTTGGATGTTGCCGGTTAAAAAAGCTAATCTTGAGTGGACTGCCAAAACTTGAGGAATTGGATCTTTCCGGCACAATATTGGAAAAACTTGACCTGGATGCCATGCAGGCAGAAAAACTTAATCGTCTTCTTCTGTTTGGTTGTCTGCATCTTTGTGCAATAAAGTGGTCAGATGTTACAAAACCACAATTGGATGAGTTACATGTAGATACAGTTGGAGTACATCTGGAAGGCAAACGACAAAATAGCTTGTCACCTGTCCAGGATGATGATAAATTATTCCAATCACATGTTGTTATCATGGATCCTAGGCTTCTTCGGTTTCTACAGTTGTTTGCAATGCAAAGTCACCATGTGCATTTCTGCATCTCACCTGTTTTTGTTAATTATAGCAAAGATGAAGGAGAAAGTAAGCAGTGCAGTAGTGCCTATGTTGATCGAACAGTTGCAGGGAATATGTACAGTGATATATTTGACAGAGTTGTTGCACTTAGTGTTGCCCCTGTGATTTGTCCTTGCCCGCGGCTGCCTTTAGAGTCAAAGTGCAACGGAAGCTGCAAGGTAGAGATCAGAAACAGAAAACAATTGCAGGGGAATGACAATATCTTAGGAAATTTCATAGACACTGTACACTCTCTAAACGTGCATGATGACTCTTGGATGACTTGTATTCCTGGATCAAATTGGGGTCGGATTAAGTGGTGCTGTATTGAGAGATGCCCCAAGTTACATTCTGTATTCAAACTCAGAGACCATGACCAAATCAAAGCCTTCTCTTGGCTAGAGACATTCTGGGCATCACATCTCCAAACAGCCCACTGCATTTGGAGCATGGAAGTCAAGCATGTAAATGTTGATTCCTTCAAGAAACTGCAGTATATACATCTGGATTCCTGTCCTAGGCTCATCCATGTACTTCCCTTGTCCAACAACTTACCAAGCTTGGAGACCATTCAGATCCTGTACTGCACCAGCCTCATATATGTTTTCCCTTTGAACACAGCAAACTCCAAGGGGACAGTAAGCAATGATGCTATTGATTTCCCAAAGCTGAAGCACGTCCACCTGCATGAGCTTCCCAGCTTGAAAGGGATATGTGAGGCAAAAATAATGTCAGCTCCCATGCTGGAGACCATCTTGATCAGGGGCTGTTGTAGTCTTAGACACCTGCCTGACGTCAAAGGATTACATGAACCAAGACCCATAGTATACTGTGAGAAGGATTGGTGGGATAACCTAGAGTGGCCTCGGAAAGAAGGTGGCTATGATCAGTCATTGCTATACAAGCGGCAGTCAGCGAAATACTATAAGAAGGCCTTGACCAAAGGCTCTATTCTCAGGTCAAATCTATCCACATACCTCTATAAGCGAATAAGCAAAAAATATTCTATAGATTTGCATGGCTAGTATAACAGAATTCCATTTCAAGTTTGTTTCCGTTACTGCAACACTGCTTTATTATATTTTCCTCTTTATTTTGTTGATCATGCTGATTCCATCATTGGTTGATTTTTCCAAATGAAGTTTTTTTTTTTTGAGAAACCCCAAATAAAGTTATGGAGGACAGTGGTGTATAGTGGGAAATAAAGTAAAGGTCCTATTTGAAATTTAGGGATTTATTGGAAATGAATTGCATGGCTAGCAATACCACTAGGCATGCGATTCTTGGTTGTAACAGGTTGGTAAGAGAAGAATATAAGTGCAATTCGTAAAATGTTTAGTGTTAATTTTCCTTGCGTGGTTTTCTCCGGACCTTGGGAACTAGAAATGTTTTTAGTGTTAATTGAGAGGTAACATAGTGAGGTATATATATATGTGTGTGCGTGTATGTGTATGTATGTATGTACATGATGGGAGATCATAGATTTGGATGAACAATTTTGAGAAAGGGGGAGAGACTAGGTTAATTCATCTTCATTGCTTGCTTACTAGTAATAGTTATACATGCTAGCACTCTACCTTTTTGTACAGATTACTTGGCTTGGCCCCACAAGATAAAACTCTATCTACAATGTAATTTTTATCTTTAATACATGTGAATATATCTGAGGGAAACCAAATTAGCAAGGAAACAAACTATTCTTATCTGTATTTTCCAACTAATAGGAAACCAGCAGGCCCACAGTACCCAGGCCCTACATTTTAATTGGCACTGTTCAGGATTCAGGAATAGTTATTTAAACTCTCAATACTTCCCCTAGAAAAACTATTTTTGCACTCTTTTGAAGTTCCAGCACTGTAAAATATCTGATGAAAAGTCGCACCAAAATATTAGTTCGGCAAAAAAAAATAAATGATAAGACTGTTTGAAGCTAAGTGGCTAACTTTTGAGTGCTGGCTATTAATGGCGGCCTGCTGTCATTTGGTACTCCTTGTTTATCTGCATAGTAAATCAGCAACAATTATATGCGCACACCAAGATGGAGGTGTAGAAAAGATACACAGAAACTAGGTTACTTAGTAGTACGGTAAGCAAAGGCTATATGGTCTAGTTTACTAGTGTGCAACCCATATGCATCTATATTATTTTTATTCATAACCTATGGAATCCTTTCACCAAGTTTAGATATATTTAAACATGAAAATGTTTATTTCAAAATTATTTGTTCTTCTGATATTTTAATTGCATGCTATTTATATCAGAATACTACAGAACGATATACTGTTCTAACGGAATAGTTGACATCATCATGATGTCAGCATGGTACCTAGGTAGCAGGATCTAGTACCATGCAGTATCATGTCTGGTATCATTGGCACCAAATATGATACCTATGGGTATTGTGTCTGGTACCACGGTACCAGATCTAGTACCTATCTAGTATCAAAAATATCAGATCTAACTAAGATACCGTGCTAATGTCGTTATACATAATCTATTCTGTTGGAATGGTATAGTGTTCTGCAGTAGCCTTCTATTTATATAGACATGTACATATGTCAGACATTATATGTTTGTACCAAATATTCAAACTTTTATACCAGGAGGTCAAAAACTAGAACCTGTTTTTATAGTGCATTGTGAACTTATCATATATGGAGCATATTGAAAGGGCACAGCTTCTTTTCTGCAAATCTGATATATTTCTTCTATAATTCCAACTGCAGGTAGATTCAATTGACTACAACGGTCACCGACATCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015339