BGIOSGA015381

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Revision as of 04:13, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015381| Description = BGIOSGA015381| Definition = Oryza sativa Indica Group BGIOSGA015381, complete gene.| tag = | tid = BGIOSGA015381-TA|...")
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Gene Name

BGIOSGA015381

Description

BGIOSGA015381

Definition

Oryza sativa Indica Group BGIOSGA015381, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA015381-TA

Ensembl Protein ID

BGIOSGA015381-PA

Length

2425

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11612906..11615330

Sequence Coding Region

11614676..11615330,11613469..11614412,11612906..11613058

Genome Context

<gbrowseImage1> name=IndicaChromosome04:11612906..11615330 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:11612906..11615330 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGTCCTGCAAATCTCTTGTCCTTCGACATCGTTGCTGCGGCGGTGGTGGTGGTGCTGATGCTTGCAACTGCAGCACCGGCCATCTCCGTGCAGCAGCTCTACGACTATCCGACGGCAAACCTCTCGACGCGGTGGGTCAACAACGCCGCGGTGCTCCAACACAGCGTCGACTTCACCGACGGGTCAGCCGTGCGCTCCATCATCCTCCGCTCACCAGAAACCATATTTGGCCCCTCCTTCGCCGCGGGGTTCTTCTGCGCTCCACCCTGCAAAGCGTTCCTCTTCGCCATCTTCATTGTCTACACTGACGGTGGTGCCAGTATCACCTCGGTACGAAACGGTATTCCGCAGGTTGTCTGGTCGGCCAACCGGGCACACCCTGTTGGAGAGAATGCTACCCTGGAGCTGACTGGAGATGGGATCCTGGTCCTCCGTGAAGCCGATGGCAGACTCGTCTGGTCGAGCGGCACTTCAGGCCGATCTGTTGTAGGCATGCAGATCACAGAGCAAGGAAACCTGGTGCTGTTTGATCAGAGGAATGTGACAGTGTGGCAGTCATTTGATCATCCAACTGATGCATTGGTCCCTGGGCAGTCTTTGCTGCAGGGCATGAGGCTGAGAGCAAATACCTCCAACACAAATTGGACTGAGAATGAAGGCCAGATTATAGCCAATGCAAAAAACAGAGATGATTGCAAGGAAGCCTGCTTGAAGAATCGGTCCTGGAGAGCTGTGATGTTCAGGTATCATGGGCAGAATGATTCTGATGGAGAATGCCAGTCAGTGACAGAGGTCTTCGTCCTGCAATCAATACAACCTGAAATTGTTCATTACAACGCTTCTGCTTACCTCAAAGTGCAACTTACTCCCTCCTCAGCAGCCCCTACACAAAACTCCTCTTCTGCACGTACACAGACCTCCTCTTTTGCCCTTACACAAAACAAAAGTAACAAAATGAAGGCAATTTTAGGTTCTACACTTGCAGCAAGTATTACTCTTGTTTTGGTTGCTATTATTGTTGTCTACGTACGAAGGAGGAGAAAATATCAAGAGACAGATGAAGAGTTAGATTTTGATATATTGCCTGGAATGCCCCTGAGGTTATCACTTGAAAAATTGAGAGAATGCACTGAAGACTTCAGTAAAAAGATAGGTGAAGGTGGATTTGGATCAGTATTTGAAGGGAAATTAAGTGAAGAGAGAGTTGCAGTGAAACGTCTAGAAAGTGCTAGACAAGGAAAGAAAGAATTCTTGGCAGAGGTCGAGACTATTGGCAGCATTGAGCATATCAATCTTGTCAGGATGATCGGATTTTGTGCAGAGAAGTCAAATAGGCTTCTGGTATATGAATATATGCCAGGAGGGTCACTTGATAAGTGGATATATTACCGCCATAACAACGCCCCACTTGATTGGAGCACAAGGTGTAGGATCATTCTGGATATTGCCAAGGGTTTATGTTATCTTCATGAGGAATGCAGGCGAAAAATTGTTCATTTGGATATCAAACCACAGAATATTCTCTTAGATGAGAACTTCAATGCCAAATTGGCGGATTTNGGACTTTCCAAGCTAATAGATAGAGATCATAGCAAGGTATGTGGTGATGGCATCGAGGACATCGGTGTGCCTGTCAGATTCTTGCCTAATGTCAAGCCTCACAAGGCACAGCCCAAAGGTAGACACCTGGCGCAAGAAGTCCAGAAGGGTCCCATCCGCAATTACACGGTCACCGCAATCGCAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MCPANLLSFDIVAAAVVVVLMLATAAPAISVQQLYDYPTANLSTRWVNNAAVLQHSVDFTDGSAVRSIILRSPETIFGPSFAAGFFCAPPCKAFLFAIFIVYTDGGASITSVRNGIPQVVWSANRAHPVGENATLELTGDGILVLREADGRLVWSSGTSGRSVVGMQITEQGNLVLFDQRNVTVWQSFDHPTDALVPGQSLLQGMRLRANTSNTNWTENEGQIIANAKNRDDCKEACLKNRSWRAVMFRYHGQNDSDGECQSVTEVFVLQSIQPEIVHYNASAYLKVQLTPSSAAPTQNSSSARTQTSSFALTQNKSNKMKAILGSTLAASITLVLVAIIVVYVRRRRKYQETDEELDFDILPGMPLRLSLEKLRECTEDFSKKIGEGGFGSVFEGKLSEERVAVKRLESARQGKKEFLAEVETIGSIEHINLVRMIGFCAEKSNRLLVYEYMPGGSLDKWIYYRHNNAPLDWSTRCRIILDIAKGLCYLHEECRRKIVHLDIKPQNILLDENFNAKLADXGLSKLIDRDHSKVCGDGIEDIGVPVRFLPNVKPHKAQPKGRHLAQEVQKGPIRNYTVTAIAE</aaseq>

Gene Sequence

<dnaseqindica>1..655#919..1862#2273..2425#ATGTGTCCTGCAAATCTCTTGTCCTTCGACATCGTTGCTGCGGCGGTGGTGGTGGTGCTGATGCTTGCAACTGCAGCACCGGCCATCTCCGTGCAGCAGCTCTACGACTATCCGACGGCAAACCTCTCGACGCGGTGGGTCAACAACGCCGCGGTGCTCCAACACAGCGTCGACTTCACCGACGGGTCAGCCGTGCGCTCCATCATCCTCCGCTCACCAGAAACCATATTTGGCCCCTCCTTCGCCGCGGGGTTCTTCTGCGCTCCACCCTGCAAAGCGTTCCTCTTCGCCATCTTCATTGTCTACACTGACGGTGGTGCCAGTATCACCTCGGTACGAAACGGTATTCCGCAGGTTGTCTGGTCGGCCAACCGGGCACACCCTGTTGGAGAGAATGCTACCCTGGAGCTGACTGGAGATGGGATCCTGGTCCTCCGTGAAGCCGATGGCAGACTCGTCTGGTCGAGCGGCACTTCAGGCCGATCTGTTGTAGGCATGCAGATCACAGAGCAAGGAAACCTGGTGCTGTTTGATCAGAGGAATGTGACAGTGTGGCAGTCATTTGATCATCCAACTGATGCATTGGTCCCTGGGCAGTCTTTGCTGCAGGGCATGAGGCTGAGAGCAAATACCTCCAACACAAATTGGACTGAGAGTAAGTTGTATATGACTGTTCTTTCAGATGGTTTATATGGTTACGTTGAATCCACACCGCCTCAACTCTACTATGAGCAGACAACAAACAGAGAGGAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTTGTCTAGAAATGCAAGACCATCAATTCTTGAGTCTTACGGATGTGTCTTACTTAGATGAAGGCCAGATTATAGCCAATGCAAAAAACAGAGATGATTGCAAGGAAGCCTGCTTGAAGAATCGGTCCTGGAGAGCTGTGATGTTCAGGTATCATGGGCAGAATGATTCTGATGGAGAATGCCAGTCAGTGACAGAGGTCTTCGTCCTGCAATCAATACAACCTGAAATTGTTCATTACAACGCTTCTGCTTACCTCAAAGTGCAACTTACTCCCTCCTCAGCAGCCCCTACACAAAACTCCTCTTCTGCACGTACACAGACCTCCTCTTTTGCCCTTACACAAAACAAAAGTAACAAAATGAAGGCAATTTTAGGTTCTACACTTGCAGCAAGTATTACTCTTGTTTTGGTTGCTATTATTGTTGTCTACGTACGAAGGAGGAGAAAATATCAAGAGACAGATGAAGAGTTAGATTTTGATATATTGCCTGGAATGCCCCTGAGGTTATCACTTGAAAAATTGAGAGAATGCACTGAAGACTTCAGTAAAAAGATAGGTGAAGGTGGATTTGGATCAGTATTTGAAGGGAAATTAAGTGAAGAGAGAGTTGCAGTGAAACGTCTAGAAAGTGCTAGACAAGGAAAGAAAGAATTCTTGGCAGAGGTCGAGACTATTGGCAGCATTGAGCATATCAATCTTGTCAGGATGATCGGATTTTGTGCAGAGAAGTCAAATAGGCTTCTGGTATATGAATATATGCCAGGAGGGTCACTTGATAAGTGGATATATTACCGCCATAACAACGCCCCACTTGATTGGAGCACAAGGTGTAGGATCATTCTGGATATTGCCAAGGGTTTATGTTATCTTCATGAGGAATGCAGGCGAAAAATTGTTCATTTGGATATCAAACCACAGAATATTCTCTTAGATGAGAACTTCAATGCCAAATTGGCGGATTTNGGACTTTCCAAGCTAATAGATAGAGATCATAGCAAGGTAATGACTGTGATGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCTATAGAGAACAGTCTGGCCACTGCTGCTGGGGCAGATTCAAGATCAGCCAACTTCTCAAACAGCGGGACAACTCTAAGTGGCGTCTTCACATGGCATTCACGTTGGAGGAGCTCAACAGCAAGCACGTCTGACGGAGCTGTCGCCATGGAAATGATATAGGCCCCAAAATTGTCAGCGGGAAGCTCAGCTATCACACGGAACGTGTCGAGAACGTCAGCAATCTCGTCGGTCTTGGGAAGGTCTGGGCCAAACAACGGGCGCTTCCCGTTGAGTTCAGACAAGAGCCAGTCCTGACGGCGTTCCTCGGACCACTCACGGTATGATCCTATTCCCAGGTATGTGGTGATGGCATCGAGGACATCGGTGTGCCTGTCAGATTCTTGCCTAATGTCAAGCCTCACAAGGCACAGCCCAAAGGTAGACACCTGGCGCAAGAAGTCCAGAAGGGTCCCATCCGCAATTACACGGTCACCGCAATCGCAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015381