BGIOSGA015698

From RiceWiki
Revision as of 04:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015698| Description = BGIOSGA015698| Definition = Oryza sativa Indica Group BGIOSGA015698, complete gene.| tag = | tid = BGIOSGA015698-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015698

Description

BGIOSGA015698

Definition

Oryza sativa Indica Group BGIOSGA015698, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA015698-TA

Ensembl Protein ID

BGIOSGA015698-PA

Length

3004

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:966099..969102

Sequence Coding Region

968413..969102,967398..968044),complement(966099..967224

Genome Context

<gbrowseImage1> name=IndicaChromosome04:966099..969102 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:966099..969102 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGCACTACTTCCTCAGCTACGGGGCGAGTATTTGGAAGAGATGTAGATCGTACAAAGATAGTAAATATGTTGCGCGAAGCAGCAGGGGACGGTGAACCAGGCTCCAGCAACTACCCGTGTTATTCAACAACAATTGGCATCTATGGCATTGCTGGATCCGGGAAGACAATCCTTGCACAATATGTCTGTGAGTATGAAAAAGAGGATGGCCATTTTTCACCTGTCATGTGGGTTGATGTTTCTCAAAGTTTCAGTGTGGATAAAATTTACAGACAGATGCTCGAAGGAGCCATTGGGCGACCATCCTATAAGTACCAAAATCTTGATGCCCTAGAAAATAAGCTAAAAGCGGAATTGGGAGACAAAAGGTTCTTGCTGGCGCTGGATGGTCTCCAGTCGGATGTTGCTCAGCAAGAACGGGACCAAGTACGTAATACACTGAATTTTGGGAAGCGGGGAAGTAAGATCCTAGTTACAGCTTTGTCCAAAGATGCAGCCATGTCCCTAGGTGCCAAGAGCCCCGTTGAAATTTCTGAGATGGATGATAATGATTTCCTTGATCTATTCATGCATTATGCACTTGATGGTGTGAGAGTACTTGATAGCCAAAAACTTCAAAAACTACATTCGATTGGCAGAGGGATCGCAAATAAGCTAAGAAGATTACCGGTTGCAGCAAGGCGAAGATGGTTGCCGGAAATGATTGCTTACGAGTTCCTGTTTATTACTTCCAGCAATGCAATGAAGTATAAACATGATATCTACAAAATGAAGAAACTCCGGACATTAATCATTAGCGCTGATGGATCGAGGGGGATAACAGAACAAGTTCTTGAGCGAATGCTGAAAGAATTGAAGAAGTTACGTGTGGTGCAAACATATCTGGATCAAGATAGAGTGATTGTCCCGGAGTCAGCCTGTGGCTTAAAGCATTTACGTTTTCTCAGCATTTTGGGATCCCATATAAGACAGGTGAAGTTGCCAACAGAATTTGGCAAACTCTACCATTTGCAGACCCTAGAGTTCCCTCTTTCATATTATTTAGATTTAAACTGTTCCAATGTCAAAAGGATGAGCAGCCAGCTGATTAACTTGCGGTCTATTTCATCTCCTTATGTTGATTTGGGAATTCCTTACGTGGAGGATTTAAAGCAACTGCAAGAGCTAAGTCACTTCAAGGTAAGGAAGGAGGAAGCGTATCGGTTAAAGCAGCTGATGAAGCAAAATAACCTTCGTGGCAGCTTGAAAATCAGGGCTTGTTTGGTTCTTTACCCTACCAATTCATTGGTAGTGCCAAAGTCTAGGAAAATTTTGGCACTACCAAAATATTGGGTATGTTTTTGGCATCAAACCAAAACGGCCCTCAGTGGCCTTGAGAGTGTTGAGAGCAAGGAGAAAGCTCTAGAAGCCAATCTGACAGAGAAGAAGTGCCTCACAACATTGTCACTTGAATGGCATGCTTATCACGCATCCTATGTCAAAGCTGACAAGGATCTACAGCTCCAAGTGGAGATACTCGACGGCCTCCAACCACCAGAGCAACTTACATGCCTCAACATCTGCCACTACCTGGGTCGCACAACACCAAGTTGGCTGTCAAGGGAACATGGGGGCGTCAGTAACCTGCAATTCCTCGAACTCAGGGAGTGTTACAACCTGGAAACTCTCCCTGAGATCGCCAAGCTCTTCACTGACCTTCGCAAGCTTAGGCTCAATGTTCTTCCCNATCTGACAAGGCTCCCAAGACTTCCAGGCATGCTGAAGAGCCTGGAAATCAGCGGCTGCAGGCGTTTGGAGGTGACATCCATGGATGACCAAAGGTTGTTTCCTGCATCCCTAGAATGTCTCCACTTGACAGGATGCACTGTCGAAGACACTGTCCTGCGCGATTCATTGAGAGGATGCACTGTCCTGGGTAGCCTGAAACTAAGTCAAATTGACTCTTTCACAGAGATACCTTCTGAGACAATGAGGTCTCTAGTGAGGCTTAGGGATCTCTACATCGGTGGCTGTAAGCAATTAGTTCGCTTGGAAGGCCTGAACCATCTTGATAGCCTGGAGCACCTTACCATCATCAAGTGTCTCAGCCTTATGGACTTGAAAGTAGCCGGCAAAGCACACGCAGTTCCTCGGCTAACCGTCGATGACATGTCCCTTGTACCCAAGCTTTTGTCAAGAGGGGCATATCCATCACTGAAATGGCTTGCGCTCGAACACTCGGTGGAACTGAGGGGAGAGTGGATCCTAGAGCACTTGACTTCACTAGCTTACCTTGGGTTTACTTCCTGCCATTGGAACAGCTTCCCAACAACTTGGAGAACCTCACCGCACTTAAGGAGTTATATTTTGATTTCTGTGGAAGTATCCGGTCCCTTCCAAAACTACCTAAATCTCTGCTGTACTTCCGATCCATTGGCTGCAAATTCCTTTTCTTGGGATCAAATTGGGACGATATAG</cdnaseq>

Protein Sequence

<aaseq>MSGTTSSATGRVFGRDVDRTKIVNMLREAAGDGEPGSSNYPCYSTTIGIYGIAGSGKTILAQYVCEYEKEDGHFSPVMWVDVSQSFSVDKIYRQMLEGAIGRPSYKYQNLDALENKLKAELGDKRFLLALDGLQSDVAQQERDQVRNTLNFGKRGSKILVTALSKDAAMSLGAKSPVEISEMDDNDFLDLFMHYALDGVRVLDSQKLQKLHSIGRGIANKLRRLPVAARRRWLPEMIAYEFLFITSSNAMKYKHDIYKMKKLRTLIISADGSRGITEQVLERMLKELKKLRVVQTYLDQDRVIVPESACGLKHLRFLSILGSHIRQVKLPTEFGKLYHLQTLEFPLSYYLDLNCSNVKRMSSQLINLRSISSPYVDLGIPYVEDLKQLQELSHFKVRKEEAYRLKQLMKQNNLRGSLKIRACLVLYPTNSLVVPKSRKILALPKYWVCFWHQTKTALSGLESVESKEKALEANLTEKKCLTTLSLEWHAYHASYVKADKDLQLQVEILDGLQPPEQLTCLNICHYLGRTTPSWLSREHGGVSNLQFLELRECYNLETLPEIAKLFTDLRKLRLNVLPXLTRLPRLPGMLKSLEISGCRRLEVTSMDDQRLFPASLECLHLTGCTVEDTVLRDSLRGCTVLGSLKLSQIDSFTEIPSETMRSLVRLRDLYIGGCKQLVRLEGLNHLDSLEHLTIIKCLSLMDLKVAGKAHAVPRLTVDDMSLVPKLLSRGAYPSLKWLALEHSVELRGEWILEHLTSLAYLGFTSCHWNSFPTTWRTSPHLRSYILISVEVSGPFQNYLNLCCTSDPLAANSFSWDQIGTI</aaseq>

Gene Sequence

<dnaseqindica>1..690#1059..1705#1879..3004#ATGTCGGGCACTACTTCCTCAGCTACGGGGCGAGTATTTGGAAGAGATGTAGATCGTACAAAGATAGTAAATATGTTGCGCGAAGCAGCAGGGGACGGTGAACCAGGCTCCAGCAACTACCCGTGTTATTCAACAACAATTGGCATCTATGGCATTGCTGGATCCGGGAAGACAATCCTTGCACAATATGTCTGTGAGTATGAAAAAGAGGATGGCCATTTTTCACCTGTCATGTGGGTTGATGTTTCTCAAAGTTTCAGTGTGGATAAAATTTACAGACAGATGCTCGAAGGAGCCATTGGGCGACCATCCTATAAGTACCAAAATCTTGATGCCCTAGAAAATAAGCTAAAAGCGGAATTGGGAGACAAAAGGTTCTTGCTGGCGCTGGATGGTCTCCAGTCGGATGTTGCTCAGCAAGAACGGGACCAAGTACGTAATACACTGAATTTTGGGAAGCGGGGAAGTAAGATCCTAGTTACAGCTTTGTCCAAAGATGCAGCCATGTCCCTAGGTGCCAAGAGCCCCGTTGAAATTTCTGAGATGGATGATAATGATTTCCTTGATCTATTCATGCATTATGCACTTGATGGTGTGAGAGTACTTGATAGCCAAAAACTTCAAAAACTACATTCGATTGGCAGAGGGATCGCAAATAAGCTAAGAAGATTACCGGTTGCAGCAAGGCGAGTGGGAGACAGGCTATGCAAAAAATTAGATGCCAGCTCTTGGCAAAAAAATTAGAGATAATGAAGTACCGTGTACTGACATCATACAAGAACAGTGGCGGAGCTACCAGAAACTTAACGAACAGGTCCGGCGATGCTTTGCTTACTGTAGTATGTTTCCACGGAACTACCGGTTCAAACGCAATGCATTGGTTAAGCTGTGGATGGCTGAAGGGTTTATCAAGACTAGCGATGGACAGAAAATGGAAGATATAGGTGAAAAATACTTTGAAGACCTAAAGTCATGGTCATTTATAAAATCAGAAGGAAAGCTTGCTGACAGTGACGATGAGTGGTTTACTATACCTGATATGCTGCACGAATTGGCAGAGATGGTTGCCGGAAATGATTGCTTACGAGTTCCTGTTTATTACTTCCAGCAATGCAATGAAGTATAAACATGATATCTACAAAATGAAGAAACTCCGGACATTAATCATTAGCGCTGATGGATCGAGGGGGATAACAGAACAAGTTCTTGAGCGAATGCTGAAAGAATTGAAGAAGTTACGTGTGGTGCAAACATATCTGGATCAAGATAGAGTGATTGTCCCGGAGTCAGCCTGTGGCTTAAAGCATTTACGTTTTCTCAGCATTTTGGGATCCCATATAAGACAGGTGAAGTTGCCAACAGAATTTGGCAAACTCTACCATTTGCAGACCCTAGAGTTCCCTCTTTCATATTATTTAGATTTAAACTGTTCCAATGTCAAAAGGATGAGCAGCCAGCTGATTAACTTGCGGTCTATTTCATCTCCTTATGTTGATTTGGGAATTCCTTACGTGGAGGATTTAAAGCAACTGCAAGAGCTAAGTCACTTCAAGGTAAGGAAGGAGGAAGCGTATCGGTTAAAGCAGCTGATGAAGCAAAATAACCTTCGTGGCAGCTTGAAAATCAGGGCTTGTTTGGTTCTTTACCCTACCAATTCATTGGTAGTGCCAAAGTCTAGGAAAATTTTGGCACTACCAAAATATTGGTAGGGTAAAATTATTTAGCTAACATTTGGATTGCTACCAATTTAAAGCCAAATTCTTATAGCATAGTGAAGAAACTTCTAGAATATGACCAAATATTTTAGGGACACTACCAAATATTTAGTCTCAATCCAAACTAACACACAAACTATTCAATTTGCCAATAAATTGGTAGGGTATGTTTTTGGCATCAAACCAAAACGGCCCTCAGTGGCCTTGAGAGTGTTGAGAGCAAGGAGAAAGCTCTAGAAGCCAATCTGACAGAGAAGAAGTGCCTCACAACATTGTCACTTGAATGGCATGCTTATCACGCATCCTATGTCAAAGCTGACAAGGATCTACAGCTCCAAGTGGAGATACTCGACGGCCTCCAACCACCAGAGCAACTTACATGCCTCAACATCTGCCACTACCTGGGTCGCACAACACCAAGTTGGCTGTCAAGGGAACATGGGGGCGTCAGTAACCTGCAATTCCTCGAACTCAGGGAGTGTTACAACCTGGAAACTCTCCCTGAGATCGCCAAGCTCTTCACTGACCTTCGCAAGCTTAGGCTCAATGTTCTTCCCNATCTGACAAGGCTCCCAAGACTTCCAGGCATGCTGAAGAGCCTGGAAATCAGCGGCTGCAGGCGTTTGGAGGTGACATCCATGGATGACCAAAGGTTGTTTCCTGCATCCCTAGAATGTCTCCACTTGACAGGATGCACTGTCGAAGACACTGTCCTGCGCGATTCATTGAGAGGATGCACTGTCCTGGGTAGCCTGAAACTAAGTCAAATTGACTCTTTCACAGAGATACCTTCTGAGACAATGAGGTCTCTAGTGAGGCTTAGGGATCTCTACATCGGTGGCTGTAAGCAATTAGTTCGCTTGGAAGGCCTGAACCATCTTGATAGCCTGGAGCACCTTACCATCATCAAGTGTCTCAGCCTTATGGACTTGAAAGTAGCCGGCAAAGCACACGCAGTTCCTCGGCTAACCGTCGATGACATGTCCCTTGTACCCAAGCTTTTGTCAAGAGGGGCATATCCATCACTGAAATGGCTTGCGCTCGAACACTCGGTGGAACTGAGGGGAGAGTGGATCCTAGAGCACTTGACTTCACTAGCTTACCTTGGGTTTACTTCCTGCCATTGGAACAGCTTCCCAACAACTTGGAGAACCTCACCGCACTTAAGGAGTTATATTTTGATTTCTGTGGAAGTATCCGGTCCCTTCCAAAACTACCTAAATCTCTGCTGTACTTCCGATCCATTGGCTGCAAATTCCTTTTCTTGGGATCAAATTGGGACGATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015698