BGIOSGA015708

From RiceWiki
Revision as of 04:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015708| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015708, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015708

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015708, complete gene.

LocusTag

OSJNBB0060M15.8

Ensembl Transcript ID

BGIOSGA015708-TA

Ensembl Protein ID

BGIOSGA015708-PA

Length

3841

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:814669..818509

Sequence Coding Region

818495..818509,817412..817574),complement(817234..817290,817075..817160),complement(816869..816957
,816732..816786),complement(815714..815766,815578..815628),complement(815453..815501
,815306..815371),complement(815123..815217,814814..815024),complement(814669..814734

Genome Context

<gbrowseImage1> name=IndicaChromosome04:814669..818509 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:814669..818509 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAACGCGGCGGACAATGAGGAGAAAAATGAAAGAGAAACTGTACAGTCTGAAGTCGCCAAAGGAGAGACTGTGCAAGGGCCTGATAAAGAATGTACAACTGGGGCAGTAAAAGGCATCAAACGGCCTAGAAAACCAAAAGGTTTTAAAAAAGGTAGTCTTCGATCAAATGAAGGAGATGCTGGGCCTTCTTTATTTTCACCAAACAACTGTCGCTATGACAGCTCGCTAGGTCTTCTTACAAAGAAGTTCATCAACCTTCTTGAAGGAGCAGAAGATGGAACCCTTGATTTAAATAAAGCGGCTGAGACATTGGAGGTGCAAAAGAGGAGGATATATGATATAACAAATGTTTTAGAAGGTGTAGATTTAATCGAAAAGACACTGAAGAATATGATTCGTTGGAAGGGTTTTGATATGTCAAAGCCTAAGGAGAGAGAACGACAAATCTCAGCATTGAAGGAAGAAATTGAGTCTCTTTATGATGAAGAGTCCAGGTTGGATGATGAAATAATGGAAGCACAAGAGAAACTGAATGCCCTTAGAGTCGATGAGGACAGAAGAAAGTTGTTGTATGTTTCGAAGGAAGATATCAATGCGATTCCTCGCTTTCAGGGATCCACTCTTATTGCAGTAAACGCTCCTCGAGGAACCTATATTGAAGTTCCAGACCCTAATTTGGATATGGACATTTATAAGGATCTGGATAATCAAGAGAAGCACTACCAGATTGTATTTAGAAGTGCAATGGGTCCTGTTGATTGCTTTCTAATAAGTAACCATCAGGAGACATTCAACGCAGACCAGCAGATGGCAGACAATTTGGATGCTGCGGTCACTAGTGGAAGTTCTCAAGCTCCGCAGCAGATGGATTATGTTCAGGCATCGGAAATTGGGGAGAGCAATGGTGCAAGAGAGCATACATCAGAGCCATCCAAAAGAGACGATCCAGTGCCTGGCATTGTGAAAATTGTACCATCAGATGATATTGCTGCTGATTACTGGCTCAGTTCTGACGCTGACGTTAGTATGACTGATACATGGGGCACTTAA</cdnaseq>

Protein Sequence

<aaseq>MANAADNEEKNERETVQSEVAKGETVQGPDKECTTGAVKGIKRPRKPKGFKKGSLRSNEGDAGPSLFSPNNCRYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETLEVQKRRIYDITNVLEGVDLIEKTLKNMIRWKGFDMSKPKERERQISALKEEIESLYDEESRLDDEIMEAQEKLNALRVDEDRRKLLYVSKEDINAIPRFQGSTLIAVNAPRGTYIEVPDPNLDMDIYKDLDNQEKHYQIVFRSAMGPVDCFLISNHQETFNADQQMADNLDAAVTSGSSQAPQQMDYVQASEIGESNGAREHTSEPSKRDDPVPGIVKIVPSDDIAADYWLSSDADVSMTDTWGT</aaseq>

Gene Sequence

<dnaseqindica>1..15#936..1098#1220..1276#1350..1435#1553..1641#1724..1778#2744..2796#2882..2932#3009..3057#3139..3204#3293..3387#3486..3696#3776..3841#ATGGCCAACGCGGCGGTGAGTCAATGGAATGTCCCCCCCGAGTTAATCCGTCTACTCCTTGCCATTACTGTTTCAATCGATTTATGCTTGTATTAAGCTTTATTCTAGTGTTTGGTTGCATGATTCGATCATTCAATTTTGGATGTTATGGATTGGTAGATGTGTTCGGGGATGTTAATTTGGTTGGGACAACTTTAGGTTGGCACGAAGATGGCTTTAGTAGAAATTTTGGCATGCACGGCCGAATCGATTGAGCTCTGCCTGCTTCAAATCTTCCTTTGCGCAATGGTACTCTATTTAGTCTCAGTTTCAGGACCAATGGCAACAATGTAATGTTGCAGTCGACATCTGTAACCTGTAAGATCGATACGTGTAAATATGGTTTGGAAAAGACTGTGTTAGATTAAGTTCTGTCAGGTGCTTCTCATGTTCAAACTAATCTGCACTGTCCACTGCAGGCAACAAACTAATCTGCATCTGCAGTTGCTTTTATGTAAAGCTTACCAGGTTCTTCTACTTAGATCAGCTCTTTGGAACATGTTTGGTAGGAGTATGTATAAGCAAGTGATTTTTATGATGTGCTAGAATTTGGTTTGATAGCATATAATGTTTGGAGTAGATGGTTTCGACCTTTGGTACCTGTCCTTAGGAGTTAGGAGGTTGTCCTGGTACTAGGAGCTTATAGTACAAGTCAATCCCTACCTTTTGGTTGGAGAAATCTTGCAACTATGGTTCGTATTATGTTGGAATGAGGGTTTTATACTTGTAGTATTTGCATATTCTCTTTCACTCTTTTGAGGAGACCATTTTTCAGGCTCATGGATGTTATACTTGATCTTCATAATGGAGCGTAGCATTCCAAGATAGTTGCTGGATCAGTTACATTATGTTTGATAATTGACAATGTTGTGTTGTGAATGGTGCATATGTTTTAGGACAATGAGGAGAAAAATGAAAGAGAAACTGTACAGTCTGAAGTCGCCAAAGGAGAGACTGTGCAAGGGCCTGATAAAGAATGTACAACTGGGGCAGTAAAAGGCATCAAACGGCCTAGAAAACCAAAAGGTTTTAAAAAAGGTAGTCTTCGATCAAATGAAGGTGCGGTCCTGCTTATATTCTATCCACTTTACATAATGTGCATTACTCTGATAATTTCATTGTAAAAGTTTCATACCAGCATTTGATTATCATCTGTTGTTCATTCTAATTTTCTTTTCAGGAGATGCTGGGCCTTCTTTATTTTCACCAAACAACTGTCGCTATGACAGCTCGCTAGGTAAAGTATGATGCATTTTTCCCAATGAAAAAAAATGCTTCATGTTTCTTATTAATTGTTACCCTTTTGCCAGGTCTTCTTACAAAGAAGTTCATCAACCTTCTTGAAGGAGCAGAAGATGGAACCCTTGATTTAAATAAAGCGGCTGAGACATTGGAGGTCTGGTTTAGTATTATCATTGAAAAAAATGCTTTCCACGCTTGTCAGACATTCAATCTTTTTAATTGTCTAAGAGTGAAGTGCCCTGATGTACCATATTTTAATAAATTTCTGTAGGTGCAAAAGAGGAGGATATATGATATAACAAATGTTTTAGAAGGTGTAGATTTAATCGAAAAGACACTGAAGAATATGATTCGTTGGAAGTAAGTGTAATTTGTTTATGTTTCTTAACGCATTCCACAAGTTAATTTTAGGTTTTTACTGACAAAATAAATACATTCAAAGGGGTTTTGATATGTCAAAGCCTAAGGAGAGAGAACGACAAATCTCAGCATTGAAGGTATGTACCGTTGTACTTTATGCTCTTCATTCTGTACATATTTTATGCTTTTAACTATCCTAAAGCTACACATAAGTAAATTATACACACATCATTATGAGTTCCATTCTTTTTCTTTAATCTTTATAGATAGAGGTAGATTGTTCTCATTTTACTTCTATTGTTTTTCAAGTCAGAAAGTGGACTAATTTAAATTGAACCATGAACTATCAGTAGGTTATGTGTTTGTACTAGAAATGGTGCCCTTCTTTTATTACATTAAGCTACTTCATGTATCACAACTGGGCATTAGGGCAGGCCTCTCCTGTATCGTTTCACTCAACTATTGGAGCATATGCCTAGGTATTAAAAGACTACTGTACTCATCCTTGTAACAAGGTGGTTGTATCATTTTACTACATGAAGACAGAATCAGTGATACATATTATCCCAATTGAACTAAATTGAACCAAGATAAAAATTATTTTGCTGCTTTTGAACCAATTATACTTTGGCTAACTTTTATTTTTCAATGACGTTAAGTAAAATAATATTGGTAACAGCTGTTGGAATTGAACTCGATCACCATGACTGTTACGGTACCATTTTATGTACCATCCAAGGAAACTATGGTTTATGTTTCCTGGTAATTTCTGATGCCATATCTGTATGAGTGCAGATTGTAGGACAAATTGACCATAACCAGTATTTTAATGGTAGAAAAATGTTTCCACAGTGGTTGGCTAGAGCGAAGTTTTAGTGGATCTGGCATGCTGGGGTATGCCTGTAAAAATAAAACGTAATAATTCAGTCCTAAGTCCATGATGAATCTTCTTCTTTATTTAGAGGCTTTCTTGAAGTTTCAAGTGCTGGCAATGCAACAAATCAACAAATCTATCCTCTGACAGTTCGCATGCCATTCCATTTGAATGTTAAGATTTTTGTCCTGCATTTTAAATTTCCTGTTGGATTTTGATATTCTGCAGGAAGAAATTGAGTCTCTTTATGATGAAGAGTCCAGGTTGGATGATGAAATAATGTAAGTACTTCCTGAAAATAATACATATATCTGATTTCTCTTGTCTCGGTCCCTCTCTTTTGATAGATAATTGCTGATTCTGCAGGGAAGCACAAGAGAAACTGAATGCCCTTAGAGTCGATGAGGACAGAAGAAAGTAAGATTCCCATTTGCAATTATGGCAGTTTTTATATTTTATATAGTCAACTGAATCATTGTGTTTTTCTTTTTAGGTTGTTGTATGTTTCGAAGGAAGATATCAATGCGATTCCTCGCTTTCAGGTCAGGACTCTTCTGGTCTCTTGTTTATTTCTTCTTCCTGCAATTGTAAAGTTGTACCAACAAGTTCGTTGTTGATAGCAGGGATCCACTCTTATTGCAGTAAACGCTCCTCGAGGAACCTATATTGAAGTTCCAGACCCTAATTTGGTATGCGATCTTTAGCTACTTTTAGCTATGTGGACAGAGATGATGAATCTGTGTGGTGCGGTTGTTGACATCTTTCTTCCTTTACCAGGATATGGACATTTATAAGGATCTGGATAATCAAGAGAAGCACTACCAGATTGTATTTAGAAGTGCAATGGGTCCTGTTGATTGCTTTCTAATAAGGTAAAGTCTCACCAGCATGACTTTCTAGAATTCATTCTACTGGTCGGTCTTCTGTGCTAAACTGCTAATCATTTACTAAACTGTTATTTTCTCACCAGTAACCATCAGGAGACATTCAACGCAGACCAGCAGATGGCAGACAATTTGGATGCTGCGGTCACTAGTGGAAGTTCTCAAGCTCCGCAGCAGATGGATTATGTTCAGGCATCGGAAATTGGGGAGAGCAATGGTGCAAGAGAGCATACATCAGAGCCATCCAAAAGAGACGATCCAGTGCCTGGCATTGTGAAAATTGTACCATCAGATGATGTAAGAAAATTCCGTCTAAACCACATCAGAAATCAAATCATTCGATGTTGTTTGATATTAATTGTTATTCGTTATGCAGATTGCTGCTGATTACTGGCTCAGTTCTGACGCTGACGTTAGTATGACTGATACATGGGGCACTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015708

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015708&oldid=64602"