BGIOSGA015710

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Revision as of 04:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015710| Description = Os04g02110-like proteinPutative NB-ARC domain-| Definition = Oryza sativa Indica Group BGIOSGA015710, complete gene.| ...")
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Gene Name

BGIOSGA015710

Description

Os04g02110-like proteinPutative NB-ARC domain-

Definition

Oryza sativa Indica Group BGIOSGA015710, complete gene.

LocusTag

OSJNBB0060M15.6

Ensembl Transcript ID

BGIOSGA015710-TA

Ensembl Protein ID

BGIOSGA015710-PA

Length

3518

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:790024..793541

Sequence Coding Region

790344..793541,790024..790077

Genome Context

<gbrowseImage1> name=IndicaChromosome04:790024..793541 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:790024..793541 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTCCCCTCGCGTCGGTGGGCAGGGGCGGTGGAATCCGGCGTGGATCCGGTGGCGGAGGCTTGGGCGAAGCTGCTGCGGTCGCTTTCCCAGGCCATGGCGCGGCTGAGGGTGCAGATGGAGTCGTTCGACGATGCCCAGATGAGGTGGGCGCTGGCCGCCGGTGTCCGAGCCAAGGCGCAGCTGCTGGCTAGCCGCCTGGCTCAGATCCTCGCCCTCTTCTGGGACGAGGGGCAGCGCGCGGCGCTCCCGGCCTGCGTGCGGGATGCCCTGTACGGCATGGAAGACATGGTCGACGATTTGGAGTACCACATGCTCAAGTTCCAGCCTCATCAACAAGAGGTCAGATGCAATCTGCTCATCTCTCTTGTCAATCTCCGCTACCGGCTCATCATCAGCCACGCGTCTCGCTCCCGCTTCCTCGAGGATTTGGATTTCGTTGCGAGCGAGGCAGGCAGCCTCCTCTCCGCGATGCATAAGCTCGAGCCCACCGCTCCGTCGCTCCCTGCCCTGCTGCTTGCTGACGACGATCATCAGGTTGTGTTTGGGCGCCACAAGGAGGTCACTGACATTGTTCGAATGCTCATTGATCCGCCGGCAAGCCACCACCACCACCCTACTTACGACATCCTCCCAATCGTTGGCATGGGGGGCGTGGGGAAGACCACACTCGCCAAGTTAGTCTATGATGATGCCAAGGTTAAGCAGCATTTCGAGCTCAGGCTCTGGGCGAGTGTCTCTACTAGTGGAGGGTTTCACAAAATTGACATCACCGAACAAATCTTGCGTTCAGCCAACCCAACATACCCTGCTTCTATTCACAGTGAACCTACGCTTGACATGCTTCAGTTCCATCTCAGCCAACTGGTAGCGTCCAAGAGATTCTTGCTTGTTCTCGATGACATCAGGGAGGAGTCCTTCACCAGCATGGCCTACCAAGAGATCCTCAGTCCTCTATCATCGGCAGAAAAGGGGAGCAGAATTCTGGTGACTACTACAACAGCCTCAGTGCCTGCCATGCTGGGGGCATCTTGTACATACCACCTGAATGTATTGGACATCGAGGATTTGTGGTCCTTGCTCAAGAAATATGCTTTCCATGGAGGCCCAACTCATGATTCCACCCAGGAGCTTGAAGAAATTGGGAGGAACATCGCATCCAAGCTCAAAGGATTGCCATTGGCTGCCAAGATGCTTGGGGGGCTGCTTGGAGCTACAAAGAGCACTAAGACCTGGATGAATGTCTTGGACAAAGAACTTTATGGCGATAGTATTCTTCCCGTACTAGAATTGAGTTACAGTTACCTGCCTCGACGACTCAAGCAGTGCTTTTCGTTCTGCAGTTTGTTTCCGAGGAACTATAAATTTAACAAAAGAGTGTTGATCCAACTCTGGATGGCCCAAGGTTTTGTTCAGTCACAGAACAGTGCTGACAAAAATATGGAGGACCTGGCAGAAGATTATTTTGAGGAACTTCTTTCGCGATCCTTCTTTGATGTACGCAGGGAAGCGTGTGAAACACACTACGTGATGCATGACCTTGTCCATGACCTCGCGCAGTCTGTTTCGGCAGATCAATGCCTTCGTGTTGAGCATGGCATGATTTCTGAGAAGCCATCAACTGCTCGCTATGTATCTGTCACCCAAGATGGACTACAAGGCCTTGGGAGCTTCTGCAAACCTGAAAATTTGCGTACCTTGATAGTTCGAAGATCATTTATATTCTCCTCAAGTTGCTTCCAAGATGAATTCTTCAGGAAGATAAGGAACTTGCGTGTCTTAGACCTTAGTTGCTCTAACTTTGTACGGTTGCCTAACTCGATTGGTGAACTAGTGCACCTGCGTTACCTATCTCTCCCTCGCACCCTCAATATGCTTCCTGAGTCAGTCAGCAAGCTACTGCACCTCGAATCATTGTGCTTTCACAAGTGTTCCCTTGAAAAGCTTCCCGCAGGCATAACTATGCTGGTCAACTTGCGGCACCTTAACATTGCCACAAGGTTCATTGCACAGGTGTCCGGCATTGGGCGGCTTGTAAACCTTCAGGGATCAGTTGAATTCCATGTTAAAAAGGGGGTAGGATGTACCTTGGAAGAGCTGAAGGGCTTAAAAGATCTCCGTGGGAAACTAAAAATAAAGGGCCTTGATAATGTTTTAAGCAAAGAAGCAGCCAGCAAAGCCGAGTTGTACAAGAAACGACATCTTAGGGAGCTCAGTCTGGAATGGAACTCTGCAAGTAGAAATCTAGTCCTTGATGCAGATGCTGTAATATTAGAAAACCTACAGCCACCCTCTAGCATAAAAGTACTCAATATCAAAAGGTACCAAGGTGCCATATGCCCTAGTTGGCTGCAGTTATCATCACTTAAGCAGCTTCAATCCTTGGACCTTATTAACTGCAGGAATTTGGAGATCCTACCTCCATTGGGACTATTACCGTCACTCAAATATCTATGTATGAAGGAACTGTGCACTGTTAATCAAATTGGACATGAGTTCTACGGCGATGATGATGTACCATTTCCATCCCTGATAATGCTTGTTTTCGATGATTTTCCAAGTTTATTTGATTGGTCTGGTGAAGTGAAAGGCAATCCGTTTCCCCATCTCCAAAAGCTAACACTTAAAGACTGTCCAAATTTGGTTCAGGTTCCTCCATTGCCCCCTTCTGTCAGTGATGTTACAATGGAGCGTACAGCATTGATATCCTATTTGAGGCTTGCCAGATTGTCTTCGCCAAGGTCAGATATGCTCACGCTTGATGTTCGTAATATTAGTATACTTTGCTGGGGACTGTTCCATCAGTTACATTTGGAATCTGTCATATCTTTAAAAATAGAAGGTCGTGAGACACCTTTTGCCACCAAAGGATTGTGTTCGTTTACTTCTCTTCAAAGGCTTCAGTTATGTCAATTTGACTTAACAGACAATACGTTAAGTGGAACTCTCTACGCGCTTCCTTCGCTATGCTCCTTGGAGATGATCGATCTGCCCAATATAACATCCCTTTCAGTTCCATCAGACATTGATTTCTTCCCGAAACTTGCTGAATTGTACATATGCAACTGTCTGTTGTTTGCTTCCCTTGATTCCTTGCACATTTTCATTTCCCTAAAGCGATTGGTGATCGAGAGATGCCCCAAACTGACAGCAGGATCCTTCCCAGCAAACTTTAAGAACCTCACATCTCTCAAGGAATCAGGAAATGTTCCTCGACTCTTCGAACACAGAAATATGCATTTTCACTAG</cdnaseq>

Protein Sequence

<aaseq>MALPSRRWAGAVESGVDPVAEAWAKLLRSLSQAMARLRVQMESFDDAQMRWALAAGVRAKAQLLASRLAQILALFWDEGQRAALPACVRDALYGMEDMVDDLEYHMLKFQPHQQEVRCNLLISLVNLRYRLIISHASRSRFLEDLDFVASEAGSLLSAMHKLEPTAPSLPALLLADDDHQVVFGRHKEVTDIVRMLIDPPASHHHHPTYDILPIVGMGGVGKTTLAKLVYDDAKVKQHFELRLWASVSTSGGFHKIDITEQILRSANPTYPASIHSEPTLDMLQFHLSQLVASKRFLLVLDDIREESFTSMAYQEILSPLSSAEKGSRILVTTTTASVPAMLGASCTYHLNVLDIEDLWSLLKKYAFHGGPTHDSTQELEEIGRNIASKLKGLPLAAKMLGGLLGATKSTKTWMNVLDKELYGDSILPVLELSYSYLPRRLKQCFSFCSLFPRNYKFNKRVLIQLWMAQGFVQSQNSADKNMEDLAEDYFEELLSRSFFDVRREACETHYVMHDLVHDLAQSVSADQCLRVEHGMISEKPSTARYVSVTQDGLQGLGSFCKPENLRTLIVRRSFIFSSSCFQDEFFRKIRNLRVLDLSCSNFVRLPNSIGELVHLRYLSLPRTLNMLPESVSKLLHLESLCFHKCSLEKLPAGITMLVNLRHLNIATRFIAQVSGIGRLVNLQGSVEFHVKKGVGCTLEELKGLKDLRGKLKIKGLDNVLSKEAASKAELYKKRHLRELSLEWNSASRNLVLDADAVILENLQPPSSIKVLNIKRYQGAICPSWLQLSSLKQLQSLDLINCRNLEILPPLGLLPSLKYLCMKELCTVNQIGHEFYGDDDVPFPSLIMLVFDDFPSLFDWSGEVKGNPFPHLQKLTLKDCPNLVQVPPLPPSVSDVTMERTALISYLRLARLSSPRSDMLTLDVRNISILCWGLFHQLHLESVISLKIEGRETPFATKGLCSFTSLQRLQLCQFDLTDNTLSGTLYALPSLCSLEMIDLPNITSLSVPSDIDFFPKLAELYICNCLLFASLDSLHIFISLKRLVIERCPKLTAGSFPANFKNLTSLKESGNVPRLFEHRNMHFH</aaseq>

Gene Sequence

<dnaseqindica>1..3198#3465..3518#ATGGCTCTCCCCTCGCGTCGGTGGGCAGGGGCGGTGGAATCCGGCGTGGATCCGGTGGCGGAGGCTTGGGCGAAGCTGCTGCGGTCGCTTTCCCAGGCCATGGCGCGGCTGAGGGTGCAGATGGAGTCGTTCGACGATGCCCAGATGAGGTGGGCGCTGGCCGCCGGTGTCCGAGCCAAGGCGCAGCTGCTGGCTAGCCGCCTGGCTCAGATCCTCGCCCTCTTCTGGGACGAGGGGCAGCGCGCGGCGCTCCCGGCCTGCGTGCGGGATGCCCTGTACGGCATGGAAGACATGGTCGACGATTTGGAGTACCACATGCTCAAGTTCCAGCCTCATCAACAAGAGGTCAGATGCAATCTGCTCATCTCTCTTGTCAATCTCCGCTACCGGCTCATCATCAGCCACGCGTCTCGCTCCCGCTTCCTCGAGGATTTGGATTTCGTTGCGAGCGAGGCAGGCAGCCTCCTCTCCGCGATGCATAAGCTCGAGCCCACCGCTCCGTCGCTCCCTGCCCTGCTGCTTGCTGACGACGATCATCAGGTTGTGTTTGGGCGCCACAAGGAGGTCACTGACATTGTTCGAATGCTCATTGATCCGCCGGCAAGCCACCACCACCACCCTACTTACGACATCCTCCCAATCGTTGGCATGGGGGGCGTGGGGAAGACCACACTCGCCAAGTTAGTCTATGATGATGCCAAGGTTAAGCAGCATTTCGAGCTCAGGCTCTGGGCGAGTGTCTCTACTAGTGGAGGGTTTCACAAAATTGACATCACCGAACAAATCTTGCGTTCAGCCAACCCAACATACCCTGCTTCTATTCACAGTGAACCTACGCTTGACATGCTTCAGTTCCATCTCAGCCAACTGGTAGCGTCCAAGAGATTCTTGCTTGTTCTCGATGACATCAGGGAGGAGTCCTTCACCAGCATGGCCTACCAAGAGATCCTCAGTCCTCTATCATCGGCAGAAAAGGGGAGCAGAATTCTGGTGACTACTACAACAGCCTCAGTGCCTGCCATGCTGGGGGCATCTTGTACATACCACCTGAATGTATTGGACATCGAGGATTTGTGGTCCTTGCTCAAGAAATATGCTTTCCATGGAGGCCCAACTCATGATTCCACCCAGGAGCTTGAAGAAATTGGGAGGAACATCGCATCCAAGCTCAAAGGATTGCCATTGGCTGCCAAGATGCTTGGGGGGCTGCTTGGAGCTACAAAGAGCACTAAGACCTGGATGAATGTCTTGGACAAAGAACTTTATGGCGATAGTATTCTTCCCGTACTAGAATTGAGTTACAGTTACCTGCCTCGACGACTCAAGCAGTGCTTTTCGTTCTGCAGTTTGTTTCCGAGGAACTATAAATTTAACAAAAGAGTGTTGATCCAACTCTGGATGGCCCAAGGTTTTGTTCAGTCACAGAACAGTGCTGACAAAAATATGGAGGACCTGGCAGAAGATTATTTTGAGGAACTTCTTTCGCGATCCTTCTTTGATGTACGCAGGGAAGCGTGTGAAACACACTACGTGATGCATGACCTTGTCCATGACCTCGCGCAGTCTGTTTCGGCAGATCAATGCCTTCGTGTTGAGCATGGCATGATTTCTGAGAAGCCATCAACTGCTCGCTATGTATCTGTCACCCAAGATGGACTACAAGGCCTTGGGAGCTTCTGCAAACCTGAAAATTTGCGTACCTTGATAGTTCGAAGATCATTTATATTCTCCTCAAGTTGCTTCCAAGATGAATTCTTCAGGAAGATAAGGAACTTGCGTGTCTTAGACCTTAGTTGCTCTAACTTTGTACGGTTGCCTAACTCGATTGGTGAACTAGTGCACCTGCGTTACCTATCTCTCCCTCGCACCCTCAATATGCTTCCTGAGTCAGTCAGCAAGCTACTGCACCTCGAATCATTGTGCTTTCACAAGTGTTCCCTTGAAAAGCTTCCCGCAGGCATAACTATGCTGGTCAACTTGCGGCACCTTAACATTGCCACAAGGTTCATTGCACAGGTGTCCGGCATTGGGCGGCTTGTAAACCTTCAGGGATCAGTTGAATTCCATGTTAAAAAGGGGGTAGGATGTACCTTGGAAGAGCTGAAGGGCTTAAAAGATCTCCGTGGGAAACTAAAAATAAAGGGCCTTGATAATGTTTTAAGCAAAGAAGCAGCCAGCAAAGCCGAGTTGTACAAGAAACGACATCTTAGGGAGCTCAGTCTGGAATGGAACTCTGCAAGTAGAAATCTAGTCCTTGATGCAGATGCTGTAATATTAGAAAACCTACAGCCACCCTCTAGCATAAAAGTACTCAATATCAAAAGGTACCAAGGTGCCATATGCCCTAGTTGGCTGCAGTTATCATCACTTAAGCAGCTTCAATCCTTGGACCTTATTAACTGCAGGAATTTGGAGATCCTACCTCCATTGGGACTATTACCGTCACTCAAATATCTATGTATGAAGGAACTGTGCACTGTTAATCAAATTGGACATGAGTTCTACGGCGATGATGATGTACCATTTCCATCCCTGATAATGCTTGTTTTCGATGATTTTCCAAGTTTATTTGATTGGTCTGGTGAAGTGAAAGGCAATCCGTTTCCCCATCTCCAAAAGCTAACACTTAAAGACTGTCCAAATTTGGTTCAGGTTCCTCCATTGCCCCCTTCTGTCAGTGATGTTACAATGGAGCGTACAGCATTGATATCCTATTTGAGGCTTGCCAGATTGTCTTCGCCAAGGTCAGATATGCTCACGCTTGATGTTCGTAATATTAGTATACTTTGCTGGGGACTGTTCCATCAGTTACATTTGGAATCTGTCATATCTTTAAAAATAGAAGGTCGTGAGACACCTTTTGCCACCAAAGGATTGTGTTCGTTTACTTCTCTTCAAAGGCTTCAGTTATGTCAATTTGACTTAACAGACAATACGTTAAGTGGAACTCTCTACGCGCTTCCTTCGCTATGCTCCTTGGAGATGATCGATCTGCCCAATATAACATCCCTTTCAGTTCCATCAGACATTGATTTCTTCCCGAAACTTGCTGAATTGTACATATGCAACTGTCTGTTGTTTGCTTCCCTTGATTCCTTGCACATTTTCATTTCCCTAAAGCGATTGGTGATCGAGAGATGCCCCAAACTGACAGCAGGATCCTTCCCAGCAAACTTTAAGAACCTCACATCTCTCAAGGTACTAAGCATATCACACTGCAAGGATTTCCAATCTTTTCCTGTGGGTAGTGTACCACCGTCACTGGAAGCACTTCATCTCGTTGGTTGCCACCAAAGTTAACTGACAATGTGGTGTCAAGAAAATTGCTCCTTAACACACCAAAGCTCACTGATGGACCATGAAGGTAAAGCTGCTGCTGATTGCTTACTTGTCCTCTAATTGTTATGTAGCTGTGAAATGTATGCCTTCAAATAATCATGCATTTTATTTCGTTGACAATTCAGGAATCAGGAAATGTTCCTCGACTCTTCGAACACAGAAATATGCATTTTCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015710