BGIOSGA016128

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016128| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016128, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016128

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016128, complete gene.

LocusTag

OSIGBA0097I24.2

Ensembl Transcript ID

BGIOSGA016128-TA

Ensembl Protein ID

BGIOSGA016128-PA

Length

4560

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12707394..12711953

Sequence Coding Region

12707394..12707441,12708743..12709117,12709228..12709345,12711358..12711581,12711705..12711953

Genome Context

<gbrowseImage1> name=IndicaChromosome04:12707394..12711953 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:12707394..12711953 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGTTCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGTACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGGGTGGTGGTAATCTTTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MRGNKGVNQDAMLVWENFCSKEDTIFCGVFDGHGPYGHLVSKRVRDLLPIKLSANLGRDGHKETSTNIVTSSMTEGGGTERMDRDTETPLGTEENGDYPEMFAALRTSLLRAFYVMDRDLKFHKTIDSVFSGTTAVTVIKQGHDLLIGNLGDSRAVLGTRDEYDQFFAVQLTVDLKPTIPSEAARIRERSGRIFSLPDEPDVARVWLPKYNMPGLAMARAFGDFCLKDYGLISMPDVSYHRITEKDEFVVLATDGVWDVLSNSEVVSIVSQAKSEASAARFVVESAQRAWRTRFPTSKIDDCAVVCLFLNTDARNKPPGSGIKDLANAIELGGGNLS</aaseq>

Gene Sequence

<dnaseqindica>1..48#1350..1724#1835..1952#3965..4188#4312..4560#ATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGGTAATTATTTCTTTCATCCCCCATTAATCCCCAATTTATTTCTTTCATCCCCCATTAATCCCCAATAACTTCTTTTCCATGTGTTTTCTGTGATGTGAATTTTTTTTTTTACTTTCTTTGAGATGAGATGATGTGTGATGTGAAATTTGTTCGTACCCCCGGCGAAAGAGAAACGTGTTAATTCGTGATTGATTGATTGATGATTGAACGTTTACATGAAAGCCCCGAACTGTCTGATATATCTGCGATTTTTTTTTAATATATGTTGTTCTTGTGTATGCTTGAGCTGGCCTACACAGATTGATTTTTTTTTCAACTTTGACATAGGACATACATGTGTCGTCTTGGTGTAGAATGCATGTTTGATTCCCCTACTTCTTGATATTAGAATACCACTTTGTTCTGTCTCCATATGGATTGCCATTGGATATTGCTGGTGGAGACTGTTTCAGATAGTAATATAATACAACCTAATTATTATTCTCCCTATGTAGAAAATTTGTTAGCAGGGGAGGTGCTCCACACGATTCTCATCCTTATCCTTTCTTCTTTTTATGGATGATCTTATTCTTATCTGTTTACACATTGAGTTTAGCTCTTGGGCCATCCTTTTGCTGTGTAATTAATGTTTGCTTATCGTTCTGCCCCATAACACCTAGTATTATCCTTTTGTTGTGAGGATCCTCTACCATAATGTTACTACCATTACAGTCACTAGTATGTGGATCCTACCCTCCCATTGCACCACACGTCGGTGCCTATAATGATAGTACCATTATTGTAGAGGATGTGAACCCACCGAGCCTTATTGTCTCCACAGTTTGCTGAAGTACCACCTGGCATGCCATGTAGCATACAACTATTGTTTTTGTGAGCCAGCTAGTAGAATGATAGCTCCTTTCATGTACTTTTGCAATGGCAACATATTTGCTGCCCTACCAATTTCTTTATTGTGATAATGGTTTCTGATTTTTCCATATTTACATCTAGTAACCATGGAAAAAAATACTATAAAAGCCAAATAATAAATTGAAAGTACAATTTTTTTGTGATCTGGTTTGTTGAAATTTTTGGAGATCTCCATGGGAATGCACCATCTGATGTTCCTTTCTATGAAGCCTTTGTAATATTAAAACCATGAATGATATTCCTTTCAGCTATAAATTACATAAATTTATCAATTCCTACCTGATAATAGTCTGTAATCATATGAATTATCCACTTCCAGTTTTCCTGTTCTACCATTCCATTTTTAGGCACCGCAAAGTTGATTTTGATGGTGTTTTTTGTTTGACTTCCAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGTTCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGTAAAAATGTGTCAAAACTTAGGAATTTCATGATGATAATGCCCTTTTTCTTATTGTTAAGCTTTAGTTGATATTTTGAAACCTGTTTTTTTTCTTTTCTATTTATACAGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTATGTTTTGTATTTGTGTTCCTCATCTGTTCTTCTAAAAGTGTATGATGATTGTTTTTCCAAGTATGTTTTGTATTTGTGTTCCTCATCTGTTCTTCTAAAAGTGTATGATGATTGTTTCTTTTTTTTCCTCCAGTACAATTGAAATCGTGGGTACTGCTGATTATTTTGATACAAAGAATTCTAGAAGCACTATTGTTCTGTAACAAGTTCTGGTACAGAGTTATTGTAGTGCGTCAAACACTTAAAATAGATTTATACACCATTATAACTATATATGTTTTTCATGAAACTACTTGATATAAGATGAACATGTGGAAATTATATTCTGAACAAGTTAGAATGTCAGGCTAGTTTTTTTGTTAAGCTGGTTAGAGTTTGAGGTGGCTGAGGTTTGCAGTCATCCTATCTGTGCTAGAGTAAAAACTTCCTTGTTAGAAGGTTTAGGATACTGCAAAATTACATAGGAAAAATCTCTAGCTTATTCCCTCAAATGTAAGGAAAAGTTTAATATTTCAGTGCTTCTACACTAGATGCATTTGTAAATTGCTGAACTGAAAACCAAAAATTGGTGAGCCAGCTGAAATGATTTCACAATGTGTCAATATAAAATGCATCTTTCATTAGTTTATTTAGTTTCACAGTGCAATAAGTTTATTTATCTGGGATGTGATAGTTCATAGTTGTCTGTCCCACGCCTTTGATTTACTGATACCTGTTGTCTGTTCGAAACTGTGATTTATTTTTTCTTTGGAGGTATGGCAATTGGCAAGATGAAAGAAACCTTTTGATATTGCAGTAAAAAGTATTTTTATATGGTACATGCTTCATTTATATACCTGTTATTTTGTGTGTGGAAACTCAACATGATTTGCACTGCCATTTTCCTCTTTCAGAATGTCAGGGCTTTAACAATTTGATGCATCCGAAGAATTTGGTTCTTAAATACTGTTTTAACACTTTTGGGAACTAAATATTCAAAATTCAAATTGGAAATAATAAAGATCTTACAAGTAAACCTCTTTTAACATTGAAACCACAAGGTGACAAATTTGATCTGCCACGTCACATCTGGTCTACAAGGACTGGCTTGATTAGAGAATGACAGATTTTTGCATCATGCAGCAAGTTTGGCATTCTATTTACATAGTGTATCCCAGTATGATATAAAAGTTCAGTTCAACATCACTCCCTGAAGAACTTTGTGAACTAATTAGTACAGTGCACATGTGTTGAGCAAAAATAGTAATGCAATGTCACAAAAGGAGAGACTATGTATGTTGATTTAAATGAGGATAGCTGAGTAGAACCTTGAACCCAGGCAAATCAGATTGACCTGACCGGATTTCACATGGCATAGGAAGTTGAACATTTACCTGGCCAAACTTCGCGCTAAATATAAAAAGGACATGCAGAAAGGTTCAAACCAACACCTACAGGTTAACATAGACACGAATGTACCAAATGAGATAACAGCTCTATTGTTTTAAACTATTAACATCCTGCATAGGATTTAGTTATGTTTTTTTTACCGTTCAAACCCAACATGCTGGTATTTTCCTGTTCAATATAATGTGGTCTGACTGGTGACCCAAGGTCAAGTAGGTGTGACTGGGTGCTTTGGATCTGATAACATTGCCATGCCTGCCGGCGTTCGGTAACTATCATCGAAAAGCGTTTTTAAAGGAAATTATTGGGACTTCGAAAAAATAATTGTAGTTTTCTACAAATAATTGTTGATATAATGAAAATCATTAGTCTTTTTTTCTGAAATGATCAATTCCGATATTTTTCCTGCATAGCTGAGATTGTTGGCACACTTCAGTATCTGTTGTAAAGGCTTGTTTCTGTGAATTATTTTAAAATAATAATAATAATGATAGTTTATGTTTGATAAGTAATATCAAGATTTTGTGTCTACATTACTAAATGGCATGCATGACTACAAATGTACACATCGGATAGTTGTTTCCTGCTTTTACTCCCCTAAATGAAGCAAAACATGTTTTCAGGTGAAGCTGCACGAATTAGGGAACGAAGTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGTACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTGTGTTGGCAACTGATGGGGTGAGCCATTGAGCACAAATTTTACTTGAACATATATCTTGCTTGTTCACAGAAGTAAATTTTACTTTTGGTTGGAAGATTATTTTTGATATATGATTGTTTTGTTTCTTTTATTAACTGTAGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGGGTGGTGGTAATCTTTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016128