BGIOSGA016142

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016142| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016142, complete gene.| tag = OsI_153...")
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Gene Name

BGIOSGA016142

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016142, complete gene.

LocusTag

OsI_15386

Ensembl Transcript ID

BGIOSGA016142-TA

Ensembl Protein ID

BGIOSGA016142-PA

Length

6937

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13203384..13210320

Sequence Coding Region

13203384..13203617,13203754..13203957,13206499..13206671,13206757..13206801,13208935..13208977
,13209982..13210320

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13203384..13210320 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13203384..13210320 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCTGCTGCTCCGGCGACGGCGGCGGTGCGGCGCGTGAAGCTGGGCTCGCAGGGCCTGGAGGTCTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCCGCCTTCCACGGGCCGTCCAAGCCGGAGGCCGACATGGTGGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCGCCGACATCTACGGGCCGCACGCCAACGAGGCCCTCCTCGGCAAGGCGCTACAGGTCGGCAGTGTGCGCGACAATGTTGCACTGGCCACCAAGTTCGGTAAATTTCTCGCCGACGGTAAGGTGGGGATCCGCGGGGACCCGGCGTACGTGCGGGCGGCGTGCGAGGGCAGCCTCCAGCGGCTCGGCGTCGACTGCATAGACCTTTACTACCAGCACCGCGTCGACAAGAAGGTGCCCATCGAGGTCACTATTGATGAACTCAAAAAACTAGTTGAAGAAGGAAAGGTAAAATATATTGGGTTATGTGAAGCATCTGCATCAACAATCAGAAGGGCTCATGCGGTACACCCTATCAATGCAGTTCAGCTCGAGTGGTCATTATGGTCTAGAGACGTGGAAGAAGATATAATTCCAACTTGCAGGGAACTTGGAATTGGAATAGTAGCTTACAGCCCACTTGGTAGAGGATTTTCGTACAGGGTAAAATCGTGTTACCACATGTGGTCACTGAATCTGCCTAGATTCCAACCAGAAAACCTTGAGAAGAATGCCAAGATATTCGATCGCGTCAATGCGATGGCGATGAGGAAAGGATGCACGGCTGCGCAGTTCGCACTGGCTTGGATTCACCACAAGGGGGACGATGTTTGCCCCATACCCGGTACCACGAAGATCGAGAATTTCGACCAGAATGTTGGGGCTCTGTCCCTGGAGCTCACTCGGGACGAAATGGCTGAGCTCGAATCCTACGCTGCTGCTGCTGATGTGCACGGTGACCGGTACGCTCAGATGGCCAACACCTGGAAGGATTGTGAGACCCCTCCGTTGTCCTCATGGAAAGAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAPAAPATAAVRRVKLGSQGLEVSAQGLGCMGMSAFHGPSKPEADMVALIHHAVAAGVTLLDTADIYGPHANEALLGKALQVGSVRDNVALATKFGKFLADGKVGIRGDPAYVRAACEGSLQRLGVDCIDLYYQHRVDKKVPIEVTIDELKKLVEEGKVKYIGLCEASASTIRRAHAVHPINAVQLEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFSYRVKSCYHMWSLNLPRFQPENLEKNAKIFDRVNAMAMRKGCTAAQFALAWIHHKGDDVCPIPGTTKIENFDQNVGALSLELTRDEMAELESYAAAADVHGDRYAQMANTWKDCETPPLSSWKEE</aaseq>

Gene Sequence

<dnaseqindica>1..234#371..574#3116..3288#3374..3418#5552..5594#6599..6937#ATGGCACCTGCTGCTCCGGCGACGGCGGCGGTGCGGCGCGTGAAGCTGGGCTCGCAGGGCCTGGAGGTCTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCCGCCTTCCACGGGCCGTCCAAGCCGGAGGCCGACATGGTGGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCGCCGACATCTACGGGCCGCACGCCAACGAGGCCCTCCTCGGCAAGGTACGTATAGTACCTTCCTCTTCCTTCCACTGGTGTCCCTCTCTTTCTTTGGGTTGATTTGCGCCATGCGCGAGTAGTGGTGCGCTGAAGGTGCTCGACGGAATGCTTGTTTGCATATGGGTTGGAAAAAAGGCAGGCGCTACAGGTCGGCAGTGTGCGCGACAATGTTGCACTGGCCACCAAGTTCGGTAAATTTCTCGCCGACGGTAAGGTGGGGATCCGCGGGGACCCGGCGTACGTGCGGGCGGCGTGCGAGGGCAGCCTCCAGCGGCTCGGCGTCGACTGCATAGACCTTTACTACCAGCACCGCGTCGACAAGAAGGTGCCCATCGAGGTCACTGTGCGTGCCCCTTCCCTTTCTCAGGTCTCTCTTTCTGTTTTTTTCTTTTCTTTTCTTTTTTCTTTTTGCCTTTGTGTTTATTGTTTTGTTATGAGAAACATAAACGGGTGAGTGATGAAAAGCTGATTATGAAAGGGAAAGTTGGTGGTGGCCTGGTGAAGGGTTTGGCAAATGGTTGGTGTCAAGGTTCATAATTATTCGGACAGTTGTTGGAAAAACGGATAATTAACTCTTAATTCTTTTATGAGTAAACTGTACTCATGGTACAACAACTTGGTAGATAGGTGCGATAAAGTATGAGAACTTGAGAAATGAACGTATAAGTGTAACAACTTGACAAGTGGGTGTGTTCTAGTACAAGAACTTGACAATTTAATATTTTGATGCATCAACTTGGCTAAGCATATGCTAGTTGATTTTTTTTTTCACGATGTCAATATATCATTAACATATAATCCTACATATATTACCTTATAATATTAGATTTAATCTTTAAAAATTATACTGCACATACAGTTTACATCCAATTAACATTTAAGAATTTTTTTTCTTCACCTTCTCAAATATCAACCGAAATATAATAATTTTTACATCCAGTTTAATTGACTTTTAGTAATTAGTTATTAGGATAAAAATATAAATATGCTTATACAAATACACGCTAGTATATTATCAAAATAAGTACTTAAAAATTGAATCTATAAAAAAAATCTCCAAATAATTAAGTTGTCTCATAACTTCTTAATTTATTGTATCAAAATTGTACCTACCTTACAAGTTGTTACATTTATATAATTACTTATAAAGTTCTTATACTAAATGCACCTACATACCAAGTTGTTGCACTAGAACGCTCATTTTCTCAAGTTTTTGTCACCAAATTACACCCACCTGCTAAAGTTGATGCACCGTGAGTGCAATTTACTCTTCTGTTATTAATGAAGAGCATAAAAAAAGGAGCATTTGATTATTTATCGATTTCACTATATAATTAATTTCATATTCTTTCGGGAAAGAAAAAACTTTGATTGAAGGACTCATTTTTTCCTTTTGGAACATCTAACTACAAACTAGCAATAATTACTATAACACGCCCCACAGTATATGCGTGTTGATCATTCTGGTGTGCTATATCTTTCTAATAACGCATACGAGCTAGCACACATTTTTGAATTGTTGCTTTAAATTATTGTGTATAAACTGCACTACCTTCCCTTGTATTTTTTTATCTTGAGAGCTATGCATGCCTTTTAAGTAATGACCTTTCTTTTCAAGTTTATCTAGTTGATCTACTAGAAAAATAATTTGTTGCCATGAAAAAAATCATGGCATCGATCAATACTAAAATTGTGGCGATAGATACATGCTGCCACAATTTTAAAATCGTTACTAGCCGTGGTAATAAATAGCGTGGTAATAGTTTATTTTAACGATTTTTATTTAGCGGTAATAAATTTTGATGTTTCCACGGAATGGATGTGGCCAAAAAATTATATTGCAACACTTCACATCGTTGTAATAAATAATTATTGCCACCACTCCATATGTGGCATTAGTTCTACATACTAAATTAAAAGTTTAAATATTAACTAATTTTGTTCTACATCATAACTATTTATTATTTGATACCTTGTCTTTGCTAGGATTCGAACACAAGACCTATCCTTCACGTGTGCTCTCCTTTACCAACTCACCTACGCATCAATTCTGTTAGAAAATGCATATCGTTCCATTTGAGCATATCTAACTAAGATTTGAATCACGGATTTAAATATCTAAAAGATTTCAAATGAAAAAGTTATCACCTATAAAATTGTAGATCTCGTTGAGAGCTATAACTTTCATATAAAATTTGTTCTAATCCATGTCCATATGAAAAAAATAAGTTAAATTATGAGATGACAATTTTTTATTGCAACGAATTTGTTGATCGTGGCAATAGAAAATAGTAAAAAGTAACATACCACAGCCATGTACTATGCAAATTGCCACAAAATTAAAATTGTGATGATAGAACATGTTTTTTCAACGGTAATGTTTTTTTTGGCAATATCTCATTTTCTATTGCAACAAAAATACTAAATAAAACAATGATGGTAAGTCGTTGCAATAAAATATAGTTATTTGTCACAGAAAAATTATCGTTGCAATAGTACAATATATTGGCACGAATTATTTTTTGTTGTGATAATTTAGTGGAATAGCTCAATTATCTTATAGTCCTTTCACATTATTAGAGCATGCTCAATGTTTCTTACTAAACTCGGTATCAGTGTGGGCCCAAACAATAGTGGGTAGTAGGTCTTTACTGCATCTGCAATGCTTATGTGTACGGGTGATGAATAAGGTGGGGGCCACTTGAGAAAAAAATTATCCATTGCTGATAGCATTGTGACCGGGTGTGTCGGAGACATTGTTCACAAAAGATTGTTTTTTCCTTCCATCCGGTAGTATACCACCTTTAAAATATTTACTACCAAGTAATAAGGTGATATTTAATACTTACTACTTGGTTTCTACTCACATTGTGGATGCCATTAGATTGATGAACTCAAAAAACTAGTTGAAGAAGGAAAGGTAAAATATATTGGGTTATGTGAAGCATCTGCATCAACAATCAGAAGGGCTCATGCGGTACACCCTATCAATGCAGTTCAGCTCGAGTGGTCATTATGGTCTAGAGACGTGGAAGAAGATATAATTCCAACTTGCAGGTAGTGAAAAGAAAACAAATTAGTTTGTCTATTGAGAAAAAATCATATGCTCCATCTTAACTATTGTTTGTTAATTCTGTTTCAGGGAACTTGGAATTGGAATAGTAGCTTACAGCCCACTTGGTAGAGGGTTAGTTCTTTTCTGGTGGAGCTAAACTAGTGGATTCTCTACCAGACCATGATTTTCGCAAGGTAAATTATCATATGCTTACTACTCGCTCAGTTTTCTCGAAACGTGGACTATCAGACAAGGTAGTCATGAAATGTGGGACTGCAAAAAATGCTGAACAATACATACCACATGATCACCGGACAAACCGTCGGATAAACAGGATGACGTACTTGGATGTGGAGCGGTGATGGTGGGAGATCCAACAGGACAACACTCACCTAGATATGGATGCGCTCCCTTCTGCAGTAGCCGACGCTACTGGCTATCCTCCTAGCGTTGGTTATCCCGTCATGGCCTCAGGTCGTGACAAGTGCAAATCTGGTGGGCAGCGGCTGTGTTGGCAGATCTAGTGGGCAACAGTGGCGGCGTTGACGATTTCGGATTATATTTTCCAATTCATGGAGTTAGAGCTTTGAATCACTCTTGGCCATTTATTATGTCTAAATCATTTTTACAGGCGGCGTCTTCAGATATCTGCATTGGAATATAATTTTTCCAAGCGGATGCAAGTCGCCGCCTGCGATAACAATTTTTAAAGATTTGAAAAATTCATATGAACTCTGATTGAGATAAACAACTTATCACTATGATCCCCACTACACATGTGTAATGTGTTCCAGCTATGTTAGGTTTCTTCATTAAAATATCTGCATTACTAGGGTTACTTACTATCGTTATATGTTGCATACCATTTGACTTTAATTTGTCAGATATCATGATATTAGTGGTAATCCCTACTAAGTTTGTAGTTGAAAGAGTTATTGACTGAATTAAACTAAAGGAATTGTAGCAAGGATCACTCTGAAATTCTGTTAATTTCAATCAGCCTTCATATAAAATTATTATGAAATTTTGAATAACAAGTAGACCTGGTTCATATGCAGTGGCTTATGAAAGCCGCTTGGGAAAAAGTTGGGACCACATTTAAGTGAGACAACAAATTGTCCACCTGTCAAATGCTCTGGATACTACATTAGATGAAATATTTAATATATATTGATTTGGATGAAAAAATGATTTAACATATATTTCAATTTCTACAAAAGATTTAACCTAGAAAACACAGTACTATAATACAAATCAAAAATTTGCCCCTAATTACATACTACTGAGGCTACTTGTCGTACTTTGGGCCTATACTAAAAAAATAATATGTACAATTAGTTGTGGCGGCGGCGCTTCACCATCGTTGTGGATCAAACGTTGACAGTTAGCCCAGTGTCAGAGCTCGCGATAGGGCCAGCGCAATGGGGAAGGGCCATGCATTCTCCTCAATCTCTGCTTCTGTTGACGGCTATGCTTGACTCTAGCCAGTGGCCCATCCTTCGCCTCATCCTATGGTGCCATAGCCACATAGGTGCCCTCCTCCTGCACCTTGGCCAAGCTGGGGATCAGCTTCGGCACCTCAGCCATGTTGGGTATGCCTCTGGCATCGGCTCTAGCCGTGCCTCTTCTTAGATGGTGTCATCCTCATAGGCTGCCATCGCCGCCATGACCATGGTGATCAAGGAGGTTATCTCTTTCTTCGCACCTGCCTCTACTGCCCTCATCCGAGTCGTCAGCCTCGTTGCCACTTTTGTCCTCGTTCTATTCCTTCAGCGATAGTGGGCCCTCGTTGGAGTCCTTTGATAGGACCTGTTGTACCACCGGTCATCCTCGCTATGCTAATTATCCCCAGGAATTTCGCCTGACAATACGGCCAGTGACGATAAGGAGGATGAGATGTCCCCATGCTCCTATATATCATTGTTGTCCTCCTCGCTAATGGCGATGTACTACGGCTGACGCGACGAGTACATTATTGTCGTAGATAGTGGAAAAAGTTGGGAGATTATGGAGAGGTTTCTCATTGCTCTCTAATAGACATGGCATGGGAGGTGAGGAGGCGTAGTGTGGTAGTGGCGGGCTTGATTGGCATCCGATGGTTCGTCTTGTGAGGAGTTCGCATGATAATCAATAGTAGATATAGCTGAAGTATTGGCGCAAGAACGATGAAAAGACAAGACATAGGCGGGCATTTAAGAGCAATATCTGAAAAATGTCGTGGACATGGGTAGCTATCTGAATGGAGCTGCTTGTGTAAATAAACAGATTTTCGTACAGGGTAAAATCGTGTTACCACATGTGGTCACTGGTACCTGTAAAAATCAAGTGGCTGCTAGCACCCACCCGTGAAAATCAAGTGGCTGGCCGTGAAAATAGAAATGATCTTTATGACTTCCTTAAGCGGTCTCCTATAGGGATGGAAACAGTTAGAAAACCAACTCTACCATTTTCATTTTCATTTTCATATTTTTTAGGAATTAAAATTGGAATAAAAATCCCTATATACAGAATAAAATATTATCAAATAAAAAATGGAGCGAATATGAATAAAAGCGAATACGGTAACTAATATTTATGGGAATATAAAAAACTGTCAAAATGAGCTTCCAAATCTTTTTAAAACAACAGATAAAATTTCCAAATTTTAGCAACAAAAAATAGCACTATCATAAGATAATACCACAGTTCAGAGATCTCATTGTCAAATCTAACTTATCATCTTTTTAGACAGTAGACATTATTAGGAAAAAACAAATCCAAAACCGTTCCAAGAAAAAATAATTCCAAATTTGTTTTCGTTATTGAAAACTTCTAAAACAATTCCGAACGCTTTACATTTCAAAAACAGGTCTGAAATCATGAAACTTTTTTGTTACAAACCAGCCCCGAAATCATCATTGATGGCTAAACAAGAAAGAAACACCTGATGACGACATCGAGACACGATATTTGATAATGGAGTTCAGCCGAAGCCTACATCTTCGAGGCACTTTACGTGCACCCCTCCCCGATCCAACATATTACAGTGAACTAGAGTTATAATGACCATCGGTTGGATGCCACCTGCAGCCGCTCCTTCTCGGCTATGCTAAGTCATCATACGGTTACAACATGTTCGTCTCTCTATCTAAGAGAGAGTCTATAATAGCGTCTAATTCTTACTCTCTATTCTTTTACCTCCTACAACTCCAAGTTCTAAACTATAACCGACTACGTACAAATATTTTGACAAAAACTCTAACATTTTTTAAACTCCTTTGAGCAATCAATTGGCAGCTTAATTTGCTGAGTACGACCTTTCACTTGTTGCAGAATCTGCCTAGATTCCAACCAGAAAACCTTGAGAAGAATGCCAAGATATTCGATCGCGTCAATGCGATGGCGATGAGGAAAGGATGCACGGCTGCGCAGTTCGCACTGGCTTGGATTCACCACAAGGGGGACGATGTTTGCCCCATACCCGGTACCACGAAGATCGAGAATTTCGACCAGAATGTTGGGGCTCTGTCCCTGGAGCTCACTCGGGACGAAATGGCTGAGCTCGAATCCTACGCTGCTGCTGCTGATGTGCACGGTGACCGGTACGCTCAGATGGCCAACACCTGGAAGGATTGTGAGACCCCTCCGTTGTCCTCATGGAAAGAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016142