BGIOSGA016164

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016164| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016164, complete gene.| tag = OsJ_143...")
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Gene Name

BGIOSGA016164

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016164, complete gene.

LocusTag

OsJ_14362

Ensembl Transcript ID

BGIOSGA016164-TA

Ensembl Protein ID

BGIOSGA016164-PA

Length

5508

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14029258..14034765

Sequence Coding Region

14029258..14029434,14030802..14030858,14031295..14033016,14034592..14034765

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14029258..14034765 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14029258..14034765 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGATCATGATCAAGGGCGGGGTGTGGAAGAACACGGAGGACGAGATCCTCAAGGCCGCCGTGATGAAGTACGGCAAGAACCAGTGGGCGCGCATCTCGTCCCTCCTCGTCCGCAAGTCCGCCAAGCAGTGCAAGGCCCGCTGGTACGAGTGGCTCGACCCCTCCATCAAGAAGTTATGTTCTCCTCATGCCATATTGCTGCAAGCATACACTGCTTTTGAAGGGCTGATGACTGAATGGACAAGGGAAGAGGATGAGAAGTTACTGCATCTTGCTAAACTCATGCCTACGCAGTGGAGGACAATTGCACCTATTGTTGGTCGAACACCATCTCAGTGCCTTGAGCGTTATGAGAAACTTCTTGATGCTGCCTGTGCAAAGGATGAGAATTATGAGCCTAATGATGATCCAAGGAAGTTACGGCCTGGTGAGATTGACCCGAACCCCGAGTCAAAACCTGCACGTCCTGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAGGCAAGGGCTCGCTTAGCTAACACCAGGGGTAAAAAGGCAAAGCGGAAGGCAAGAGAGAAACAACTTGAAGAGGCAAGGCGACTTGCCTCACTGCAGAAAAGGAGAGAATTAAAGGCGGCTGGTATTGATACACGGCAGAGGAAGAGAAAGAGAAAGGGTATCGATTATAATGCTGAGATTCCTTTTGAAAAGAGGCCGCCTCCAGGTTTTTATGATACTGTTGGTGAGGACAGGCCACTTGAGCATGTACAGTTCCCAACCACTATTGAGGAGCTTGAAGGTAAGAGAAGAGTAGACATAGAGGCACAATTAAGAAAACAAGACATTGCCAGGAACAAGATTCTCCAGAGGCAGGATGCTCCTGCTGCAATTATGCAGGCAAATAGACTCAACGATCCAGAAGCTGTCACAAAGAGGTCCAAATTAATGCTTCCACCACCCCAAATCTCTGATCATGAGCTAGAAGAGATAGCAAAGATGGGTAATGCTGGTGATCCTTCTTTAGTTGAGGAACTTGGCGAAGGTAGTACTGCCACAAGAGCATTGCTTTCTAGTTATTCCCAAACTCCAAGACTTGGAATGACACCATTGCGGACGCCACAACGAACTCCAGCTGGGAAGGGTGATGCTATTATGATGGAGGCAGAAAATCTAGCGCGTCTAAGGGAGTCTCAGACCCCTCTTTTAGGAGGGGATAACCCGGAGCTTCACCCATCAGATTTCTCTGGTGTTACACCACGTAAGAAGGAAATGCAGACTCCAAATCCAATGGCAACACCTTTGGCAAGCCCTGGCCCTGGTGCTACTCCAAGAATTGGAATGACACCCTCCAGAGATGGAAGTTCTTTTGGTTTAACTCCAAAAAGTACTCCTTTCCGAGATGAGCTTCGCATAAATGAAGAGGTGGATATGCAAGATACTGCTAAACTTGAGCTTCGTAGGCAAGCTGAATTGAGAAAAAGCCTACGATCTGGGTTTGCTTCTATTCCACAGCCTAAGAATGAGTACCAGATAGTTATGCCACCTATCACGGAGGAGGAGAAGGAAGAAGCTGAAGAGAAAATTGAGGATATGTCAGACAGGCTTGCACGAGAGAGGGCTGAGGAACAAGCAAGGCAGGAAGCCTTGCTCAGAAAGAGATCCAAAGTTTTGCAGAGGAGCTTGCCAAGGCCACCGGCAGCTTCTATAGAAATTCTCCGACAAACTCTAATTAAGGGTGGTGAAAGCAGAAGCAGGAGCACCTTCGTGCCTCCTACATCACTTGAACAAGCTGACGAACTAATAAATGAGGAGCTTCTTCGGCTCCTTGAGCATGATAATGCTAAATATCCTCTAGATGAGAAAACTCAAAAGGATAAAAAGAAAGGAAGCAAGCGCCAGGCGAATGGGACTCCTTCTGTACCTGAGATTGAAGATTTTGATGAAGACGAATTAAAAGAGGCCAATTCTATGCTTGAGGAGGAGGTTCAATACCTTCGTGTCGCCATGGGACATGAAAGTGAATCTTTGGAAGATTTTGTGAAAGCACATGATGCATGCCAAGAGGACCTTATGTTTTTTCCAAATAACACAGCTATGGTCTTGCCAGCGTTGCTGGAAATTCTGATAAGATAG</cdnaseq>

Protein Sequence

<aaseq>MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKLCSPHAILLQAYTAFEGLMTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPNDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFYDTVGEDRPLEHVQFPTTIEELEGKRRVDIEAQLRKQDIARNKILQRQDAPAAIMQANRLNDPEAVTKRSKLMLPPPQISDHELEEIAKMGNAGDPSLVEELGEGSTATRALLSSYSQTPRLGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEMQTPNPMATPLASPGPGATPRIGMTPSRDGSSFGLTPKSTPFRDELRINEEVDMQDTAKLELRRQAELRKSLRSGFASIPQPKNEYQIVMPPITEEEKEEAEEKIEDMSDRLARERAEEQARQEALLRKRSKVLQRSLPRPPAASIEILRQTLIKGGESRSRSTFVPPTSLEQADELINEELLRLLEHDNAKYPLDEKTQKDKKKGSKRQANGTPSVPEIEDFDEDELKEANSMLEEEVQYLRVAMGHESESLEDFVKAHDACQEDLMFFPNNTAMVLPALLEILIR</aaseq>

Gene Sequence

<dnaseqindica>1..177#1545..1601#2038..3759#5335..5508#ATGCGGATCATGATCAAGGGCGGGGTGTGGAAGAACACGGAGGACGAGATCCTCAAGGCCGCCGTGATGAAGTACGGCAAGAACCAGTGGGCGCGCATCTCGTCCCTCCTCGTCCGCAAGTCCGCCAAGCAGTGCAAGGCCCGCTGGTACGAGTGGCTCGACCCCTCCATCAAGAAGGTATGTGCATATCCCACTCCCCCTCGTGATCTGTCTGCTCTGTTAGAGCTGCATTTCTTGCTCACTGATTTAGATTTAGCGCATGAATGAGTTTTTCACATGAGATGTTACAGCGTGATTAGGGGAAAAAATGTTGTTTAATGTGGTATACTGTTTGCATTCTTCGTTGTATTTTAGACCTTAAGATGGATGTTATAGTAAATTGTCCGTGAGATCAGCAATGTCGAGACAAAATTAGATTTAGATTTAGCGCATGAATGACTTCTTGACATGAGATGTTACAGCCTCAATAGGGGAAAAATTGTTGTTTAATGTGGTATATACTGTTTGCATTCTTCGTTGTATTTAGACCTTATAAGATGGATGTTATAGTGAATTGTCCATGAGATCTTATTCAATAAAACATGGTTTCCTGCATTTCAAAATCTAGTTGGATGTTTCTGTAACGACATGCCGTCACCATGTTCCCTGATCTGTCAGCCTGTTTGGTCCTGAGCCGCGTGGTTCGAGCTGCATTTTTTGCTCACTGATTTAGCGCATGAGTTAGTTCTTGACATGGGATGTTACCTTAGGGGAAAAAAATGTTGTTTGATATAGTATACTGTTTGCATTCTTTGCTGTATTTAAAAAAAATGTTGCCACTCGCTACAAGTTATTTCTGGAGCATGGAAGTTAAGACTTTAGAGTAGAAAATTCTGTTGTGTTTAAGAAATCTTATTCAAGTAGAAATTTATCAGGTCCTAGAACCTTTCCATGTTTGGTGAACTTAGGAATTTCATCACCCGCCACCTCATGATTTGTGGTTCTGTAAAAATACTATTCTATATCTCACTTCCCTCTGAGCACAGGGCCCATACTAGCAGTGGGTCACATTCCACTGCACCAGAACTTTTGAGTGAATTAGAACTGAACACTTCGCAGTAAATGATCTTTCGTCAAATTAGTTCAAACTCACATATACAGATTTCATGATTACATTTGGAATCACAAATTCAGGACCCACTTTAGACATATGGGACTATGACTCTGAGGACGTAGGCTTTGTATATTAACAATTCCTACATGATTAAAAAGAAAAGTAACAATAGTATTAGTATCTTTCTGTTAAACAATAATCTGGGTCATATTAGTAGTGTGGTTTAGAACTGTTCTTTACATGTATATTAATTTTCTCAGTTTGCAACACATGCTAATATGCTGCTTAAAAAGTAAAAGAAGGGTTGCTTACTAGACGTGGGTTTTATTTTATCTGGCTATATATCTTGTTTAGATATTTCCCAGTATTTTTGTCTACTTTACTGAAATGTACTCAATAGTTTTGGACCAATATATAAAATATTATCAACATATTCCTTCCATTCCTCTAGTTATGTTCTCCTCATGCCATATTGCTGCAAGCATACACTGCTTTTGAAGGGCTGATGGTGTGTCTATTGGTGGTAAATTTACCATATGGAACTAATGCTTAATACAACTATCTCTTTGTGAATGCCAGAACGATGGCACATTTAAACCATGCTGCTACATCATTATGTTGCCAATTGACACTGCAATTATGAAAATTCTCTGATGTTAAACCCTCAACACTCTGTGATTTGATTGAAATAAGTGCTTTTGGACGTGTTGTATCTTGTTTGCCATTCTATGAACCTAAATTGTTCAAATTATTGTATAGCATTTGGTATGCCCTTTTTGCTCAGTCTGGATAATTTCGTCTCATGATATGTCATTAACAATATATCGCATTTATTTCAATTATTGGTTCTATTTGAGCATAACCAATTGCACTTGCAGATTTGTCACACCAACTATTATTCTCTCATTTTATTTTCTGTGCTAACTCTTTTTTGTTGATGGCAGACTGAATGGACAAGGGAAGAGGATGAGAAGTTACTGCATCTTGCTAAACTCATGCCTACGCAGTGGAGGACAATTGCACCTATTGTTGGTCGAACACCATCTCAGTGCCTTGAGCGTTATGAGAAACTTCTTGATGCTGCCTGTGCAAAGGATGAGAATTATGAGCCTAATGATGATCCAAGGAAGTTACGGCCTGGTGAGATTGACCCGAACCCCGAGTCAAAACCTGCACGTCCTGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAGGCAAGGGCTCGCTTAGCTAACACCAGGGGTAAAAAGGCAAAGCGGAAGGCAAGAGAGAAACAACTTGAAGAGGCAAGGCGACTTGCCTCACTGCAGAAAAGGAGAGAATTAAAGGCGGCTGGTATTGATACACGGCAGAGGAAGAGAAAGAGAAAGGGTATCGATTATAATGCTGAGATTCCTTTTGAAAAGAGGCCGCCTCCAGGTTTTTATGATACTGTTGGTGAGGACAGGCCACTTGAGCATGTACAGTTCCCAACCACTATTGAGGAGCTTGAAGGTAAGAGAAGAGTAGACATAGAGGCACAATTAAGAAAACAAGACATTGCCAGGAACAAGATTCTCCAGAGGCAGGATGCTCCTGCTGCAATTATGCAGGCAAATAGACTCAACGATCCAGAAGCTGTCACAAAGAGGTCCAAATTAATGCTTCCACCACCCCAAATCTCTGATCATGAGCTAGAAGAGATAGCAAAGATGGGTAATGCTGGTGATCCTTCTTTAGTTGAGGAACTTGGCGAAGGTAGTACTGCCACAAGAGCATTGCTTTCTAGTTATTCCCAAACTCCAAGACTTGGAATGACACCATTGCGGACGCCACAACGAACTCCAGCTGGGAAGGGTGATGCTATTATGATGGAGGCAGAAAATCTAGCGCGTCTAAGGGAGTCTCAGACCCCTCTTTTAGGAGGGGATAACCCGGAGCTTCACCCATCAGATTTCTCTGGTGTTACACCACGTAAGAAGGAAATGCAGACTCCAAATCCAATGGCAACACCTTTGGCAAGCCCTGGCCCTGGTGCTACTCCAAGAATTGGAATGACACCCTCCAGAGATGGAAGTTCTTTTGGTTTAACTCCAAAAAGTACTCCTTTCCGAGATGAGCTTCGCATAAATGAAGAGGTGGATATGCAAGATACTGCTAAACTTGAGCTTCGTAGGCAAGCTGAATTGAGAAAAAGCCTACGATCTGGGTTTGCTTCTATTCCACAGCCTAAGAATGAGTACCAGATAGTTATGCCACCTATCACGGAGGAGGAGAAGGAAGAAGCTGAAGAGAAAATTGAGGATATGTCAGACAGGCTTGCACGAGAGAGGGCTGAGGAACAAGCAAGGCAGGAAGCCTTGCTCAGAAAGAGATCCAAAGTTTTGCAGAGGAGCTTGCCAAGGCCACCGGCAGCTTCTATAGAAATTCTCCGACAAACTCTAATTAAGGGTGGTGAAAGCAGAAGCAGGAGCACCTTCGTGCCTCCTACATCACTTGAACAAGCTGACGAACTAATAAATGAGGAGCTTCTTCGGCTCCTTGAGCATGATAATGCTAAATATCCTCTAGATGAGAAAACTCAAAAGGATAAAAAGAAAGGAAGCAAGCGCCAGGCGAATGGGACTCCTTCTGTACCTGAGATTGAAGATTTTGATGAAGACGAATTAAAAGAGGTAGGTTTTCTTCCCCTCTTATTATATTAGTATTTTAGCAATGAGACATGCCTATTTTAATCTGTTAACATCTATTTCAAGTGACTGATAGACTCTACTCATGAATGCAAATTTTGTTGGATTAGTTATAACTTGAAATCCTGTAGTAATAACTTGAAATCCTGTGTGTGCAAGATTGATCAATGTTTATCTCTCACTGAACACATATAACATGTGCCTTAAAGCATCAATCCTAAATAATTTATGACTTCATGTAGCAACTTTTGTATTCTTACTCTTTGATTCTCAAGCAGCCAAAGTTTGAATTATCCTAATGGCATCAAATGTTCTCTGGAGGATAACTTGAATTAATGCTAACTTTATATGTTATACTGGAAAGATACCATGTAGCTGTGGGATCCATAGGATCATGTGCTTAGTTTTAAGAACGTAATGTTTGATCTGATTAGCACTATAAAGATATAACCATGTGCTTGGCATTGCAGGATCATGAATCTGTTTACATGTAGTACCCTTTTGGATACTTTGTATTTTGGTCTTTGGATAGTCAGAACAAAAAACTTCATTCCATAAAAAATTGCAATGCCTTATTTACGGTGCATCCTTTGGTTATTGAATGGCTCAGCCATTGTCTCCTTGGTATCATTGTTTGATGCAGTAGATGGCTAGAACATATGAGCTCATTTCACGTACTCAGCTTTGATGGGAACATGTTTCACAATGAATTGCCCATGTCGTTAATGATTCCCATAGTGACCCCAACAAAAGATCATGTCTTGTGTGGTGAGATGTGAAATTGCATCACATCATTGTGAAAATTTAATTGACAGTATGAAATCCGTGTTATGCCATTGTGAGAATTTCATCTGCATCAACTAGCAATCACATTGATAGCAAAGGTGATCTAGCTTACATGGGGCCTTCATTGTCAGTAGAGTAATGGGGTGGCATCATTTTATATTGGAAGACAATGCACATATAAATTTCCTTAGCATATAATCTCTGGACAGGGCACAGAGAGCTGAAGGTAACGCTTTCAAGTTTCAAGCCAATCTCCCAGACAATTTAAACGGAGATATTTTGTAGAGATGGACCTAGAAGCTATATTCTCTCATCTAGTCATTTCCATACATTGTCTGTGAAGTTATTTCTGTACATAACCTGTAGATTTTCATCAAGAACCTTCCATTTCGCATCTATTTTTTGTTTCTAGTCAGTTTGGCATATGGTCTATTTTCTGGGTTTCTTGGATTCTTTTGAACAGTACTTATATTAATGCTATACACAATCCGCATGCTGTAGCCAGTATTCAATTTTCTCAGGAGTTACTCAGGTTTTAGTGTACTACATCATACGCGATATATGGTCGGTTTTTAGTTGTCTCCATGGTTAGTTTATTGTATTGATAGTAAATGTGATATTGCTTGATGCTTACCGTGAAAAAAGCTACGATACTACCATAGTAATTGGGATCATCTGCAAGATATGACTTCATATTATTTCCAGTCTTGTGCCCCTAATTTATTTATGTAATGGTGCAAGTTAATCCATATTGCGTCATTTATTTGTTCACAGGCCAATTCTATGCTTGAGGAGGAGGTTCAATACCTTCGTGTCGCCATGGGACATGAAAGTGAATCTTTGGAAGATTTTGTGAAAGCACATGATGCATGCCAAGAGGACCTTATGTTTTTTCCAAATAACACAGCTATGGTCTTGCCAGCGTTGCTGGAAATTCTGATAAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016164