BGIOSGA016179

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016179| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016179, complete gene.| tag = OS04G03...")
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Gene Name

BGIOSGA016179

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016179, complete gene.

LocusTag

OS04G0353600

Ensembl Transcript ID

BGIOSGA016179-TA

Ensembl Protein ID

BGIOSGA016179-PA

Length

5761

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14373351..14379111

Sequence Coding Region

14373351..14373429,14374533..14374636,14375252..14375451,14376612..14376712,14378079..14378124
,14378294..14378345,14378459..14378586,14378931..14379111

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14373351..14379111 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14373351..14379111 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACAGGAGGCATAGCGGAGCGTTTCAGAGACAAGACTATACTCATCACCGGCGCTACTGGCTTCCTGGGAAAATTGCTGGTGGAGAAGATACTACGAGTTCAGCCGGAGGTGAGGAAGCTATACCTGCTAGTTCGTGCTCCGGACGCCATAGCCGCCGAGGAGCGTGTTCTCACTGAGGTTGTAGGAAATGGTCTATTTGATGTTCTGCGAGAACAATACGGTGCTGGGTTCCACTCCTTCATCAAGGAAAAAATATACGCTCTACCTGGAGATGTGACGCATGAAAACTTTGGGCTTGAGAGTTATGACATCCTGCAGTTATCCCAGAAGGTAGATATCATCGTCAATGGAGCTGCAACGACAAACTTTATGGAGAGGTATGATGTCGCTTTAGCAACAAATACAACAGGAGTCGTGCATTTATGTCAGTTTGCAAAGCAGTGTGATAACCTCAAGATGGTGCTTCATGTTTCCACCGATACCTGGGGATATGGTGATCAACGCAATGATGGCAGCCATAAACAGTTAGTATACTTCCAGGCATACATGATTCTACGGTACAAGGTACCATTGGAGATGATGCGTGCAGCAAATGTACTGTTGGGAGGGATATACACCAAGAACTACTATGAGCTTAACCGAGGCTACAACATTTTAATGACTGTGGCAAAGCTGTATGCCCCATATGTATTCTTCAAAGGATGGTTTGATGACACCAACCTGAGGAAACTGTGGAAGGCGACGGCTATGGACCAAAATGATGATGCATCCATATTTAATTTTGATCCTAAGTGCATTAACTGGAGCTCATACCTCGTGAACACCCACATTCCAGCTGCTATAAAGTATGCCAATAACCAGAAGACGAAAGCACGCAGTGCATAA</cdnaseq>

Protein Sequence

<aaseq>METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGAATTNFMERYDVALATNTTGVVHLCQFAKQCDNLKMVLHVSTDTWGYGDQRNDGSHKQLVYFQAYMILRYKVPLEMMRAANVLLGGIYTKNYYELNRGYNILMTVAKLYAPYVFFKGWFDDTNLRKLWKATAMDQNDDASIFNFDPKCINWSSYLVNTHIPAAIKYANNQKTKARSA</aaseq>

Gene Sequence

<dnaseqindica>1..79#1183..1286#1902..2101#3262..3362#4729..4774#4944..4995#5109..5236#5581..5761#ATGGAGACAGGAGGCATAGCGGAGCGTTTCAGAGACAAGACTATACTCATCACCGGCGCTACTGGCTTCCTGGGAAAATGTACTCTCTCTAGCTAAAATATGTCTTCATATTATGTGTGTTCATCTCTAGTTTTGGTGATTTTCATTTCGCATATATAATGTCATATGGCTTCATTGATTGGTATTTATACATTATCTCACCGTGGGCAGTATATAAACTTTTCGACTGATCATCATCGATCCAGAGTATATAGAAAGCTATCATTTTCTGCAAACTCGATTGCACGTTCTGGCGTGGAGTTGGAGTTGTAAAAAATAATCCACTCAATAGTGTAAATAAAATGTTATTGGGCCTTAGTGTAAAAAAAGATGAAGCTGTTTATACTTTGCAGTTATTGGATAAGGATGAATACACTCGACCCCATATTAATTGGTACCGATTAGAAGCCCACCATAGATGTTGGTTATCCTCTATTAATTGACACCATTGGAAATTTATCATAGGTGTCAGTTTCATAGCTGGTATCAATGTAAAGGTGTGTGGTCACTGAACTATAGGTGACAGTTCAGTTTTAGGTTAACAACCGACACCTATATTATATATGTTGGTTTTTTTTTCTAATCTGTACCTATACTATACGTTAGAAAAGATGTCGGTTTCGGTTGAACTGGCACCAATGGGCCATCCCATAAGAGGGATTCTGCAGTAGTGCTTGACGACATGTTTGTAAAGTGTTTTACATTACAAATTAGCTAGAAACATTCTGCTTTGAGGAAAAAGTAAAGACGAGCTACCTTGATGTTAATATGTATAGTGAGAAAAAAATGACTTGTAGACTACTATAAAAAAATGTTTTCGTAGATGCCCTCCATTTTGCTGCATAGAGGGTTTTCTAGGCCACAATTCTACATGTGGATGGGTTAGGCTATTTAATTTTTTGAGATGATTGTTTTAACATACTCTCTATAAAAGTATAATATTTTCATAGACGGTCGGTCAAAGCCTGTTGATCTAAAAGCACATAATGTAAATTCCCTTTTAGCCTGCTATAAAAAAGCTTTAATTTTATTGGTGGAAAATAATTAATGATGTGGGTTTTTCTTATTTTCAAAAGAACTTGTATGTCCGTTTGTACATATGTGAATGCTACACATGTTTATTACTGTCTACGACGTACGCAGTGCTGGTGGAGAAGATACTACGAGTTCAGCCGGAGGTGAGGAAGCTATACCTGCTAGTTCGTGCTCCGGACGCCATAGCCGCCGAGGAGCGTGTTCTCACTGAGGTACAAGTACAAACGAGCCCACAGATTTTGCTACGGTTTTCAACTCGTTCTGCACGCTGAAATGCATTACTACTATTCTAACATATATACAGCTTGGCAAATCTTAATTAATTAATTAATTCGCAGTGACAGAAGATGGATGCTTACGGGTCCATGGAATAAGCCAAACGGCATATTTGCAAGCGAAAAATAATTTGTGAATAAAACTTTTATATTCGTGTTTTTAGCGATCTAAAAGTAAAGGCTGAAAAATAAACTTAAAATCAACTCCAAATTTCAGGTTAAAAATTTAAATTTTGGCTGATAAGTATAAACATAAGCGAAAAAATGAGGCTGTTAATTTCATTGCCTTAATGAAATCTCTACTGTCAGCTTACCGGCAAAAGGCATCCAATATAGTATTGCACAGTATATTACAAACTTTGAAAACTGAATTTAAGAAACTTCCATATAGAATGTTTTCCAAAAGTGGCACCTTTTATCGGTTAAGAAGCATGCCCACGATAATCCAATAGGCAGTAGCTAAAAACAAGTGCACCTTATGTATAATATAGCCAGAGCTTCGGTGAAATAAATAAGAGGATTAATCAAACTGGTTTACTTGTTGCCGTATAGGTTGTAGGAAATGGTCTATTTGATGTTCTGCGAGAACAATACGGTGCTGGGTTCCACTCCTTCATCAAGGAAAAAATATACGCTCTACCTGGAGATGTGACGCATGAAAACTTTGGGCTTGAGAGTTATGACATCCTGCAGTTATCCCAGAAGGTAGATATCATCGTCAATGGAGCTGCAACGACAAACTTTATGGAGAGGTATATATATATATCTCTTGAAGATTGATATATAACATCGTTCTCGTGGGGATTTCAATTTGTTATTTCCTTGTGTACTGCCTCATAATCTAAAGATGTTTGGGTTGCTGAATGAAACAAATGTGTCTTCAATGCATAATTTTATTTCGTGATCTCATATGCTTTTCATAGCATTTAATTATTGAATGATGTTATGAAACTATTTAATTACAATGAGGTTTAATTTATTTCCATTTCCAATGCATAGGATGTGAAATAATTCAGTCCCAAAGTGGTTTCATTAATTCTGTTTATAAGGCATAGTTAAATGTGTAAACCAAGTTTCATCTAGATGAAACTCATTTATTCTATCTCGACATGTCGTAAGTTTACCCTGTATGACATTTCATTTAGTGAGATTAAAACCCTACAACATGACATATCTTCACATTTGTCAGAATATAATAATTGATAGAATACGATCCGATGACCATGAATGGATCTCTTTCTACTGCAAAGCAATCTTGTCAATTTGTGGAGTCTAATGCCTTATCTCTGAATTGAACCCTCCCCTTTTTCTTTGCTGCAATGAGAGGGTAATGCAAGGATCCGAATTAAGAAAGATATTTGGATATGTGATGGAGATCTATGAGCTGATCAACGTCTCCGCAACGCAATCGATCAGACCAATTAGTTGAACGCATGAGAAGGCCGGGCTATATGTATGTACCTGGATATATGTGTTATTCTATATTATGAGTCGAATGATATGAATTCTAGGGTTGAGTGTTGGTGAAGCTGTGCCTGTACAATCGCAACTAATCCTTAGGTTGTAAAGAGCGATGGAGGTCAACGTGGACGCTATCCCGATGGCAGGAGCACACCACTCCGGCCATCGTGTGTGGCACTCCCATGATCTAATCTGCTAAATTACATCCATGTGCCTACGTGAATGATGGGCATTGTGTATCTAGACGATGAGATGAGATAGGCCTTAGATGGTTTTAGAAGAACATAGTAATAGGCTTATAATGACGAAGGTTATAAAAAATCAACAGATATGATTAAACAATTTTCTTAATTAATGGTTAGATCTTTCTGATTAACGTGAAAGCTCATTGAAAGTACCTAATTAGTATAGGTATAGATATGCCATAATCTCATTGGATCACTGTGTGCAGGTATGATGTCGCTTTAGCAACAAATACAACAGGAGTCGTGCATTTATGTCAGTTTGCAAAGCAGTGTGATAACCTCAAGATGGTGCTTCATGTTTCCACCGGTAAGCTTATATAAATACTTCATCTACCCCAAAACAGACCAAATAATAGCATATCACCTAACAGTACCATATATCTGAATAGGACCTATCTCATCTTATCCTAGGATCTATTTTAAGACAGAGGAGTAGTATTCAACGTTAGAACATGCAAAACCTCTAGTTCTGTAAATGGGAGTTCATCACAGATTTTCTTGATTAGTTAACTACTACCGATAGAAATCAGTTAATTTTCCACCTTAAGTTCTATAAACCGTCATTTCCTACATGTTTTACACTTCATTCCTGACATCTTTGCCAACACATCCCAACCTACATGTTCCATATAGAATAGTTCGGAACAAAATTTCGAAAACTTTAGTATCCCTCTATAGGGTACTCCTTTGGTTAGTATTTTTTGTCATGCAAAATTTATTCTAATTTCAGTTTTACCGCTCAAATTTTGAGCAACTTTCAGAATTTTGATTCTCAGTCATCATAATGTTTTATTTCCTCAATACAAAACCCTCGTCCCACCACTATATAACCATCTCCTACCCCTTGCCTCTGTAACAACCTATTTTCCAAAATCCACAATAGCTTAGCTCAGCTCTTACAGTGGCCAGCTGATGCATAGCATCACATTTAAACTCATGGCTTCACTTCATACAAAAGGTTCTGACTTCACCTATCCGTGCATGCATGACGAGTCCAGCCAATATCACACCACGGCCCATGTCCTCCATACAACCACAGCTCACTTCCTTACCACCAAAAGTACACAACTCTGATTGGCTTACCATGTGATCCCTCAAATCTTATCGACCCACTTATGTTTTAATATGCCCTCTCTGTGTGGCACCACCACTCATACAACATCTTTGGCTCTTCCAACCTTTCCAGTATCATAGTTTACCCTAAGCAACAAAATCCTAATATTAGTGATTTGCTTGCAAATCCACCACTGCACCACAAACTGGCCAATGTAAAACGAAAGTTTCTATGAGCAACACTTTTATAGTACATTGTATCACACACACACACACAGATACACACACACACACATATAGATATATATATATACAGTATATATATATACATATATATACAGATATACATACATATATACATATACATATACATATACATATACATATACATATACGTATACATATACATATACATATACATAAACATATACACATACATATACATATACATACACATACACATACACATACATATACATATACATATACATATACATATACATATACATACATACATATACATACATATACATACATATATATACATATATATATATATATACATACATACATATATATATGTATATATGGTTATTTATCGAAATTTGTAAATTACACAGATACCTGGGGATATGGTGATCAACGCAATGATGGCAGCCATAAACAGTCAGTGGAATAAACAAGCTCAAGTGATATACCATGTGACTTCCTCTCACCAAAATCCCGTACCGTTATCTCTTATTGAAGAATCATTGTACAAATACTTTCACAAAAATCCACGTACAAGTAAAGATGGGAAGGCAATACAAAATGAAAAAATTTTAACGTTCAATAGGTTAGTATACTTCCAGGCATACATGATTCTACGGTACAAGGTACCATTGGAGGTATAGACAATACCTTTCTTGATTAGTTCCAGAAATTAAATCCCCAGCCTAGTTTGGGTACAAATTGATTTGACTTGCTGACTTTGGCATGTTGATCGTGTGATAATAAGCAGATGATGCGTGCAGCAAATGTACTGTTGGGAGGGATATACACCAAGAACTACTATGAGCTTAACCGAGGCTACAACATTTTAATGACTGTGGCAAAGCTGTATGCCCCATATGTATTCTTCAAAGGATGGTGAGCTTATTTCTTATGTGCATTTAGTAGACCAAAAGATGGAAACTGTGTATTAATTTCTGGTACGTTTTAATTTGAGGTTCCCCTGCCACTCTCATTTACAGAAGAAAATAGCACATTCTTTTTAGCAAGACAATCTTCCTATACTTCTCTAGAACTAATGATGTTCCTATAATTGAGAATGCCCCTTTTAGAATTATAATAAATTACACATGCTTTTTAACATTTATTTACTAAAAAATCTACCATTCATTGAAGTAGGTAATAAATCAATAACTGCATTCTTTCTTGATTTACCTACACGCTGATTTTCCTTCTGCATGCATATATACATTTTGATGAAGGTTTGATGACACCAACCTGAGGAAACTGTGGAAGGCGACGGCTATGGACCAAAATGATGATGCATCCATATTTAATTTTGATCCTAAGTGCATTAACTGGAGCTCATACCTCGTGAACACCCACATTCCAGCTGCTATAAAGTATGCCAATAACCAGAAGACGAAAGCACGCAGTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016179