BGIOSGA016221

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Revision as of 04:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016221, complete gene.| tag = OsI_155...")
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Gene Name

BGIOSGA016221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016221, complete gene.

LocusTag

OsI_15567

Ensembl Transcript ID

BGIOSGA016221-TA

Ensembl Protein ID

BGIOSGA016221-PA

Length

2740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15790851..15793590

Sequence Coding Region

15790851..15790993,15791618..15792818,15793540..15793590

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15790851..15793590 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15790851..15793590 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGGAGCTGCTGTCAACCATGACCACGAGATTAGGAGAAGGATGCAGCGGTGGCCGGTGGCAGTAGGCGGAGGGGAGGCAGCGGCCGTGCGCCCGTGCGACGCTGGAACAGCGCACCAGATTGGCAGTGCACTGGAATGTAACTTAAGTGTAGAGCACTGGGAGGACATATTGAGAAGTGAATTGTGGAAATTGGAACAAGAGGAGACTGACATTTTGCCAGCCCTTCGACTGAGTTACGTTTACCTACCACGACACATGAAAAGATGCTTCTCAATATGTGCCCTGTATCCAAAGGATCATAAATTTGACAAGGAGTTTTTAGCAGACATTTGGGTAGCACAAGGGTATGTGGAGGCTGAAGATGCATCATCTTGCTTTAATGACCTTGTAAATCGGTCATTCTTTCAGAAAGCAGCTGGCTATAGTGATATGTACGTAATTCATGACTTGATACATGATACTGCACAGCTAGTCTCCAAGGATGAGTGCTTCATCATACAACATGTGAGTGACCTAGCTAAAATCCCATCAAAGGTTCGCCATCTGTCAATATTCACCAAGGGAAATATCAGCTGTACAGAAATAGTGACTATTTGCACACAAAATAAAAAACTGCGGTCCCTAATATGCAATGAATCTTACCGAAGTATTAAACAATTCGCTCCCGTGATTGATTGTTGGTTCAAGGAACTCCCGAGTATCCGTGTATTGATTTTTAAATTTTCAACGGTGAGAAAGTTACCTGAGAGCATAGGCAACTCAAAACATTTGCGTTACCTTGGTTTATTGGGAAGTTCTACTTTCGAGACCCTTCCTTCATCTGTTAGTTGCCTGTATCATGTCCAGACTATAAATGCCAAGGGTTGTGTTTTCAAAAGATACCCTCAAGGTTTCAGTGATCTGATTTCCTTAAACAAAATTGAATCAAAGGGCTTCCAATTTAACAAGGTTAAAGATAAGCAATTCCTAGAATGGTCCACAACGGAAATAGCTGATGAACAATTACAGATGACAGAGGAGCAGATTGAATTGTTACCTCATTGGAATCTTGAGCATTTGATAATAAAGAATTACCTAGGTCAATCTTGCCCCAGCTGGCTCCAGCCAGACTGCCTGAAAGTGCTGACTTCACTTGAACTTTATGGGTGCAGGAACATTCAGAGCCTATCATTCTTTGACCCACTCTTTTCTGATTTAGAAGAGTCAAACAGCATTTATCACCTTGAGGTGTTGGATGTCCACCAGTGTCCTAACATTGATTGGCAAGGTTTGGTGGCTTTACCCTCTTCTCTTAGAAGGGTTACCCTTGGCAACTTTGGCCATTCGACAGATCACTTTTTCATTGGCATCGACGTGCAGGCCATAAATAATGATGAGCGTTCAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MVGAAVNHDHEIRRRMQRWPVAVGGGEAAAVRPCDAGTAHQIGSALECNLSVEHWEDILRSELWKLEQEETDILPALRLSYVYLPRHMKRCFSICALYPKDHKFDKEFLADIWVAQGYVEAEDASSCFNDLVNRSFFQKAAGYSDMYVIHDLIHDTAQLVSKDECFIIQHVSDLAKIPSKVRHLSIFTKGNISCTEIVTICTQNKKLRSLICNESYRSIKQFAPVIDCWFKELPSIRVLIFKFSTVRKLPESIGNSKHLRYLGLLGSSTFETLPSSVSCLYHVQTINAKGCVFKRYPQGFSDLISLNKIESKGFQFNKVKDKQFLEWSTTEIADEQLQMTEEQIELLPHWNLEHLIIKNYLGQSCPSWLQPDCLKVLTSLELYGCRNIQSLSFFDPLFSDLEESNSIYHLEVLDVHQCPNIDWQGLVALPSSLRRVTLGNFGHSTDHFFIGIDVQAINNDERSR</aaseq>

Gene Sequence

<dnaseqindica>1..143#768..1968#2690..2740#ATGGTTGGAGCTGCTGTCAACCATGACCACGAGATTAGGAGAAGGATGCAGCGGTGGCCGGTGGCAGTAGGCGGAGGGGAGGCAGCGGCCGTGCGCCCGTGCGACGCTGGAACAGCGCACCAGATTGGCAGTGCACTGGAATGGTATACTGGACACGTGGCGTGATTTTACCATACGCAAACTTGCGTTCAGGTTTTGCCACGTGGCCCAATCAGCGCCAGGGTCCGATCCCTGAAATCGGTATAAGAGATTGATAGCAACTGGCTTAACTTCAATCGTTGAGGTATTGGAGGTAATTTTCATAATGTGCGTAATGATCCATATGCTAAATTTAAGGTTACGATTCCCTCTTTTCATTGTGCCTATGATGCTGAAGCTTATTTTGATTGGGAAATAACTGTAGATAAAAAATTTAGTGCACATTTATTCCTGGTGAGCATAGGGTTAAGCAAGCTACTAGTGAATTTAATAATTTTGCAACAGTATGATGGACTCAAATAAGTACAGATGGACTAGCACCTACAACATGAGAAGTGTTAAAGACAACTTGTGCACTAGATTTGTGCTCCTTCTTTTAGACGTGATCTTTTAAAGAAATTGCATGCTTAGACTAGGGGGATAAATCTATAAAAGAATATTATCAGGAGTTAAAAAATGTTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGTTGAAGGGTTCACCTTTGGCTGCCAAAACTCTTGGACGCTTGTTGAAAAGTAACTTAAGTGTAGAGCACTGGGAGGACATATTGAGAAGTGAATTGTGGAAATTGGAACAAGAGGAGACTGACATTTTGCCAGCCCTTCGACTGAGTTACGTTTACCTACCACGACACATGAAAAGATGCTTCTCAATATGTGCCCTGTATCCAAAGGATCATAAATTTGACAAGGAGTTTTTAGCAGACATTTGGGTAGCACAAGGGTATGTGGAGGCTGAAGATGCATCATCTTGCTTTAATGACCTTGTAAATCGGTCATTCTTTCAGAAAGCAGCTGGCTATAGTGATATGTACGTAATTCATGACTTGATACATGATACTGCACAGCTAGTCTCCAAGGATGAGTGCTTCATCATACAACATGTGAGTGACCTAGCTAAAATCCCATCAAAGGTTCGCCATCTGTCAATATTCACCAAGGGAAATATCAGCTGTACAGAAATAGTGACTATTTGCACACAAAATAAAAAACTGCGGTCCCTAATATGCAATGAATCTTACCGAAGTATTAAACAATTCGCTCCCGTGATTGATTGTTGGTTCAAGGAACTCCCGAGTATCCGTGTATTGATTTTTAAATTTTCAACGGTGAGAAAGTTACCTGAGAGCATAGGCAACTCAAAACATTTGCGTTACCTTGGTTTATTGGGAAGTTCTACTTTCGAGACCCTTCCTTCATCTGTTAGTTGCCTGTATCATGTCCAGACTATAAATGCCAAGGGTTGTGTTTTCAAAAGATACCCTCAAGGTTTCAGTGATCTGATTTCCTTAAACAAAATTGAATCAAAGGGCTTCCAATTTAACAAGGTTAAAGATAAGCAATTCCTAGAATGGTCCACAACGGAAATAGCTGATGAACAATTACAGATGACAGAGGAGCAGATTGAATTGTTACCTCATTGGAATCTTGAGCATTTGATAATAAAGAATTACCTAGGTCAATCTTGCCCCAGCTGGCTCCAGCCAGACTGCCTGAAAGTGCTGACTTCACTTGAACTTTATGGGTGCAGGAACATTCAGAGCCTATCATTCTTTGACCCACTCTTTTCTGATTTAGAAGAGTCAAACAGCATTTATCACCTTGAGGTGTTGGATGTCCACCAGTGTCCTAACATTGATTGGCAAGGTTTGGTGGCTTTACCCTCTTCTCTTAGAAGGGTTACCCTTGGCAACTTTGGCCATTCGACAGATCACTTTGTGAGTTGCTTTCGTGGCCTCTCCCTCCTGACACATCTGGAAATACATTGCTGGTTCTTAACATCTATTCCCCTGCAAGTTTGGATGAGTAATCTTCCATCCTTGGAGAATTTGCGTATTGATAATTGTGGCTCCCTCACATCCATCTGTGTCTCTGAGGCAAGCAACATACACACTGTCGGAGTATTTTCATCCCTTTCAACAGTCACCATTTCGTCTGGCAATGCCCTGCTGAGTCTTGATGAGTTCTTTATGCCCGCTTATATGCCTTTCGTGAAGACCATTGATGTGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTCTTATTAAGTTCACAGAAAATTGTCATGATAGAATTGCTCTGCTTCCATGTCATAAATTATGTTATACTTATTTGTAATATTTAGTTTCGTGTGAATTTCATGATTGGTAATACAATTAACCGTATTTTCATCAACTATGGCAAACGGACTGATTTCCATTGGCTGTCAAGTACACAATAAGCCGATACTAGCTTTTCCAAGACTCAACTTTTATAATACTATGCCATAGAATACTTATTTGTTTAGATTTAGTTATGTTGTAGGAAAAGAAAGATGAAACGAAGTACGAAATGTATTGTTTATATTCATTGGATTTGATAGTTCATTGGCATCGACGTGCAGGCCATAAATAATGATGAGCGTTCAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016221