BGIOSGA016235

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Revision as of 04:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016235| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016235, complete gene.| tag = OS04G03...")
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Gene Name

BGIOSGA016235

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016235, complete gene.

LocusTag

OS04G0379800

Ensembl Transcript ID

BGIOSGA016235-TA

Ensembl Protein ID

BGIOSGA016235-PA

Length

4573

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16032626..16037198

Sequence Coding Region

16032626..16032687,16032781..16032886,16033048..16033114,16033240..16033341,16033441..16033505
,16033907..16034005,16034441..16034508,16035453..16035666,16036118..16036173
,16036402..16036509,16036751..16036934,16037103..16037198

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16032626..16037198 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16032626..16037198 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAAACCCTAGCCGAGGACGCCGCCGACGCGCCGCTCGACGCGGCGGCCATTCGAAGCCGGTTGGAGCGGCTCGCGCTGTCGCGGCGAGGGGAGGAGGAGGTTGCTTCGGCGGCAGCGGCGGCGGCAGACGCGGTGCGCCGCCTTCCCTCCGTGGAGGACGTGGAACCTTTGCAGGGGTTGGAATTCGAGGCATGGGCCTCCAGCGCCGCGCCAATGGAGAGCGACTTTGATGCGTTCATGGAATGGTTGAGTAAGGAGATAAGCTTGGCTGAGGAGGAGAACCGCAAGCTATCTGTTGAAATTAGCAGCGTTGCAGAGACAACTCTCAAAGATTCGATTCAGTTGGATGCTGATATTGCCGAATTGGAGTCTTCATTGAAGAAAATTGATTCAGAGGGCTTGAAACACTTGGAGGCAAGCCACATCGCTGAGTTATCAGTTTCAACTGATTCATGCAGAGACCAAATTAAATTTGACAAGGACTACAAGTATGAGGTACTGGAACTTAACCAACAGCTGGAAAAATATGAGAATGACCTGAAGCTGTTAGAAAACCAAAAAAGTGCTGAAGCAATGTGGGAACTTGAATCTATGTTATCAGAAGCAAATGTTTTAGACTTTAAAGACAATTGTCTCAGGGTATTCCTGAAGGAAGCTGTACTCACGCCTGAATGTTTAATGTACGGGAAAGAGTCAGATTGTTCTGTTAATTCATTCGTTTCAGACCATGAATTGCTGATAGAAGTTGGAGAAAACATGGAACCAAAGAAAGTGCAGATATTTCCTGATGATACCTGTGTAGATATACTTCTTGATAAGCTCAAGGCCTCCAGAGAGACCATTTCTACTACATCACTGGGATGGATTATTCGGCAATTTCAACACCACATTATAATCAACACTTTGAGGCGTTCCTTGGTGAAAGATGCTAATAATTCCAGGCATTCTTTTGAGTACATTGACAAAGATGGGACAATTCTAGCTCACTTAGCGGGTGGCATTGATGCCTTCATCAAGATATCTGCAGACTGGCCACTGTCATCCTGCGGCCTGAAGTTAATCTCCATTCACAGTTCCAGGGCGCAGTCAGCAGATATTTCTTTAGCTTTGCTTTCCAAAACAAAGGAACTGGCCAATGGATTGGAGCTTCAGACTCGTCGACATCTGGTGAAGTTTGTAGATGCAATTGAAGATATTCTTTTTCGAGAGATGCGGTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAETLAEDAADAPLDAAAIRSRLERLALSRRGEEEVASAAAAAADAVRRLPSVEDVEPLQGLEFEAWASSAAPMESDFDAFMEWLSKEISLAEEENRKLSVEISSVAETTLKDSIQLDADIAELESSLKKIDSEGLKHLEASHIAELSVSTDSCRDQIKFDKDYKYEVLELNQQLEKYENDLKLLENQKSAEAMWELESMLSEANVLDFKDNCLRVFLKEAVLTPECLMYGKESDCSVNSFVSDHELLIEVGENMEPKKVQIFPDDTCVDILLDKLKASRETISTTSLGWIIRQFQHHIIINTLRRSLVKDANNSRHSFEYIDKDGTILAHLAGGIDAFIKISADWPLSSCGLKLISIHSSRAQSADISLALLSKTKELANGLELQTRRHLVKFVDAIEDILFREMRS</aaseq>

Gene Sequence

<dnaseqindica>1..62#156..261#423..489#615..716#816..880#1282..1380#1816..1883#2828..3041#3493..3548#3777..3884#4126..4309#4478..4573#ATGGCGGAAACCCTAGCCGAGGACGCCGCCGACGCGCCGCTCGACGCGGCGGCCATTCGAAGGTAGGTGGATAAACCCTCCGCCGCCTCCTCCGATTCGCCCGCGCGGATTAGGTGTTCGTTCGTCTCAGTTTTTTCTTTTCGTTTTTGGGTCAGCCGGTTGGAGCGGCTCGCGCTGTCGCGGCGAGGGGAGGAGGAGGTTGCTTCGGCGGCAGCGGCGGCGGCAGACGCGGTGCGCCGCCTTCCCTCCGTGGAGGACGTGGTGAGCGGACTGGCTGTGAACGGCGAGGGTTTGGTTAATTTTAATTTTATTACTACGAGGGGAGAGAAAAATGGGTGCGCTTTTAATTTTAATTTTGTTTTCCTTGAGAAAGTCGAGGCATATGCTAAATCATTTTGTGTTTCTGGGCTCTGTGTTTGTAGGAACCTTTGCAGGGGTTGGAATTCGAGGCATGGGCCTCCAGCGCCGCGCCAATGGAGAGCGACTTTGGTTAGCTGTCTGATTCCATTTAATCGTTGTTGTGTTGGTTAGTAGTGGCATAATCATACCAGCTTGAGCTTAGTCCACATATCCTGTGCAAATCTACTCGTAAAATTGGATTTTCATACTGCTAGATGCGTTCATGGAATGGTTGAGTAAGGAGATAAGCTTGGCTGAGGAGGAGAACCGCAAGCTATCTGTTGAAATTAGCAGCGTTGCAGAGACAACTCTCAAAGGTTTGCTTCTCTTGAGTCTCTGTTATTTAAGGTCCTGTTAATTGACAACAGCATGCTCCTCGCAGTTCTCCCTTTGACACCTAACTCTTTGTTATCTAGATTCGATTCAGTTGGATGCTGATATTGCCGAATTGGAGTCTTCATTGAAGAAAATTGATTCAGAGGTTGTTCTTGAATACTTAACCCAGTAATCCTCATTATTTCTTATCTCTACCACTTCTGAGCTTGCTAAATATTTTTTAAGTTGCTTCACCCAAATGAATGGGTAGTACAGGATTGTTCCCTAGATGGAATGTACACGTCAACTGATTGACTCCTGTCATATAACTGTGTTACTTTCTTGTTTCAGTCACTTTCATTGAATCTCATTTCTAGCTGGTTTGCTGCACAATTTAATAACAAGTAGTACAGGGCTTTGATTGCCATAATGACATTCTAGTGTTAGTGTTTAACTATCACTTGGGTTAGTTGGATGTAATTTTGTAGTATTGCCAAATATTTTACTCTTTTGAAACCTACATTAATTCTTTTTTCTCAAGCAATGCTGTGCCCTTTCTTTATGCAGGGCTTGAAACACTTGGAGGCAAGCCACATCGCTGAGTTATCAGTTTCAACTGATTCATGCAGAGACCAAATTAAATTTGACAAGGACTACAAGTATGAGGTGTGGTTATATGGTCTAATAGTTGACAGATTCCATGTATCATGCTGTCTATGCTAAATTGCTGATTATATTAGACAACTTTAATGAGCTAAATATGATATGAATCAATGCAATGTCTTCACAATATAATTTCTCGAATGCAGATTTTGTTCTCTGTTGAACATTGTGTCATACAATCTGGTAGTCACTGTACATTTCTCAATGCAGTTCTCCTACATAGTAACATAGACAACATTTCCCACCTCTTTATATAAAAACTGTATTCCTCAAACAAAAACACATGCAGTCATACATATGCTTTCACACAGAGTAGTATCGAATATCGATGACAATCAAGCATATGGATATAATGCATATGCGGTAATAGCCTTTTTGTATTGAGATTTTCCTTTTTTGCAATTTGCCTTTTAATATACCCGTTTTATGATTTCCTAGGTACTGGAACTTAACCAACAGCTGGAAAAATATGAGAATGACCTGAAGCTGTTAGAAAACCAAAAAAGGTAGTACTGCTTGTTTATGTTCAGAATGATATGACATCTTAATCTTGTAATGTAATTAGTTTACAGCATCTTAGCATTGCCAATTCTAGTTCTACTCATTTATCATATTTTGAACGATATGACATTATGATTTATCATAATAATAATCTAGCTTGTCATATTCTGTATGATTTTCAAAACTTAATACCATTTGTTTTCAATAATGAGCAATTTAATTTATCTTACAGATGAAGTTTCTCAGATTCCACATGGACTTTATCTGATTGTCAGTTTGAGTAAAACATTTATTGTGATGTTTTCATGAATTTGAACTCTGCCATGTTTCTTTTTGAAATTCCCTGGAAATAATAAATCTGTTGCTTCACATTTTATTTGTAATTCTTTAAGAACAGAATGGACCTAAGCTTGGTTTACTGTTATCTAATGATGCGTGGAGATTAAGCCATGTGATGTGCACTACTTGACTATATTGTAGCACCCATTTATCCATTTTTTATCTTCCTCAGTTTCAGCATTTCAATCTTCTAGAAGACCTTCTCATCCCAAATCCCAGCACTATTCTTATTTGCCTATATTGTTAACTTGAGGACATAAATGTTTTAGCTATCCATTTCTTGGTCTGGTTTTGAGCTGGTGATTCTGCTGCTGTACATATCTTCATTATTTTCAGCCATGAACTCTTTGGTCGGTCTCCTGCTTGGCTTTATACTTAAAGATTTAAAGTTTATAACTGCAGAATACATATTCTTACCCTTGCATCATTAAGTTTGTTAACTTCTAAATGTTGAACCATGCTTACCTGTAGGTTTCATGCATCATTCCATCCTGTTAAGATGTGTTATTATAGTCATTTGAGGTTTAATTGCATCTGACCTACATTTAGTGTTTATGTTTCCTCTGGTTTGAAGATTTGAATTTTCTACTGACATATGTACCATATCCAGTGCTGAAGCAATGTGGGAACTTGAATCTATGTTATCAGAAGCAAATGTTTTAGACTTTAAAGACAATTGTCTCAGGGTATTCCTGAAGGAAGCTGTACTCACGCCTGAATGTTTAATGTACGGGAAAGAGTCAGATTGTTCTGTTAATTCATTCGTTTCAGACCATGAATTGCTGATAGAAGTTGGAGAAAACATGGAACCAAAGAAAGTGCAGGTAATCTCATAACTGAATTTGTCTTCACATTTTAAAATAAATTATCTCTGGGATCTAATCATTTTGCATTATGCATCTACCATTGATTTTGCATGCAATGCCTTATGCTTGTATATATTTTTCTGTCCTAAATGCAATGATGCGCAGTCCTCCTGCATATTTGAGAAAGCAAAATGTAATGCCTTATGCATTGCCTGCGGATTACTGGTTGTCACAATTGAAATCACAGAACAAGATGTGAATAATAACGTGAGTCCATGTGACCATTGCTTAGGAGATAATGATGATTTTTTGTTTCACTCTTGCATAACCGTGGGCAAGAAAAGCAAGCTTAGTTCAGTTTCACTGTCCAAACCATGCCATGTTTATTAATAATGACACAACAGGAATTTGCCTTTTTAGGAATTTGTACTGGTTATGTATATTCTGAGTTTGTTTTATGTTTTTTCAGATATTTCCTGATGATACCTGTGTAGATATACTTCTTGATAAGCTCAAGGCCTCCAGGTATTCTGCATTTGTTACCTTCTCTTTCACAAAGCTTGCTTGATATTCTTCCAAATAAAAAGCTAGCTTGTTGAAACAATGTGATCAATTAATGTTTAAGGTGATGATGTAGATTCAACACGGTTTCGTTTCTCATGTTAGCAATAATGTCAATTTCTCTGTTATTCTACTGACCAATGTTTCTTTCTTCTTTATGCATTCTTACACTCAAATGAACTCTTTTTGTAGAGAGACCATTTCTACTACATCACTGGGATGGATTATTCGGCAATTTCAACACCACATTATAATCAACACTTTGAGGCGTTCCTTGGTGAAAGATGCTAATAATTCCAGGTAACATGATTCACCATTCCTTTGCATTTTGCTAGTAATTTTTTTATTTGTTGATGAAACTTGAAAGTTGAAATTAGTAGTTGCAAGGATTCCGTGTTCTCTACACCTGTACGTTGAGTATACCAAGTTTACAAGATTTAGGAAAGAACTAAACCATAGGTGTCCAACATTGTAACGTATGCACATAATTTGTTGCTTCCCGTTCAATTTTTCTTATTTTGGTGAGACCACATTCTTACAGGCATTCTTTTGAGTACATTGACAAAGATGGGACAATTCTAGCTCACTTAGCGGGTGGCATTGATGCCTTCATCAAGATATCTGCAGACTGGCCACTGTCATCCTGCGGCCTGAAGTTAATCTCCATTCACAGTTCCAGGGCGCAGTCAGCAGATATTTCTTTAGCTTTGCTTTCCAAAACAAAGGTACAGATGGTCATCTCAGCCCCAATGCTTGTATTTTCAGCAGTAAAATTATGCGTACAAATTCTGAAACCGTAGAAAGAATCATTTCCAGCATTCACAATTTTTATTATATCTCGTTGAAACAAACCACCAACCTAATCAATTTTTTGTGTTCTGCAAAACATTCAGGAACTGGCCAATGGATTGGAGCTTCAGACTCGTCGACATCTGGTGAAGTTTGTAGATGCAATTGAAGATATTCTTTTTCGAGAGATGCGGTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016235