BGIOSGA016320

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016320| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016320, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016320

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016320, complete gene.

LocusTag

OSJNBB0014D23.8

Ensembl Transcript ID

BGIOSGA016320-TA

Ensembl Protein ID

BGIOSGA016320-PA

Length

7433

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17498516..17505948

Sequence Coding Region

17498516..17498569,17499361..17499366,17504006..17504722,17504833..17505765,17505901..17505948

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17498516..17505948 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17498516..17505948 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTATATGGGAGCAGACTTGGTAGCTGCTTATGCCCTGTTAGCGTCCCAGGGGATGGATGAGGATGCCGTCGCTGCTCATCAGCTGGTTTTTGTGTGGGCACCATTCCTCCTCATACACCTTGGTGGCCAGGACACCATCATTGGCTTCTCCCTAGAGGACAACAATCTTTGGCTGAGGCATCTGCTGAATCTTGTAGTCCAAGTCGTCCTCGCCTTGTATATCTTCTGGAAGTCAGCCATTGGCCCCAACATGAATAAGGTTGAGCTTGTTATGAGTATCCTTTTGTTTGTTACTGGAACAATCAAGTATGGGGAGAGAACATGGGCCCTACAGTATGGGGTCCTCATAACTCTTGCGGCCTCTCTTCCTAGGTATGCTCTTCAGTTGCGGAACTCTTTTCAGAAGTCCCTTCCCATCTGTCCTGGTTGTGACCAAGACAAATATATTGGTCAGCTGCTAGACAATGCTGATAGCGGCACGAATGATGATGATGATCCCTTTCCCGAGCCCCTTGTTCTCTCCATTGCCCTATGTTCAATGCCAAGTGCCCTTCGCTTATTCTGGGATAATGACACTATCTGTATTGTTATGAACGAGTGGGTTCTCGTACGTGCCTACCAGTTACCTAAGGCATTGGAGATCTTGGAGATTGAACTTGGCTTGGTGTATGATTATATCTACACTAAGGCCGTGGTGTTTCAGACAAGACGTGGCATTGCACTTCGATGTATCTCACAGGCATCCTTTCTAGCCGTTTTTCTGCTCTTCCTTAGAAGAAGGGTGTGGTGGTCGAATTCCATGGGGCAGTACAAACAGCGTAACCATTTGGCAAAGTATGATGAAGAAGAGAAGCGATCAAGAAGCTGGTCATGGAAACGAGGAGTAGTGGGGGGCAAGATCAGAAAGGTTGTGGATGCTGTTTGTGGGGAGAAGGTGAAGTTTTGGATTAGTAAGCAGTTGGACATCAATTTTGCCAAGGTGGATAAGGAGATCATACGGTGCATCTTCAACAAGGTTGTCGAGTGTGCTGCTGAGGCTCATCAAAGCCAAAATAGTTTGCCGGCCCAGGAATGGTCAAATCTTAGTGTGCTGCTGAAAAATCTCTTGGAGACTCCTGATGGCACTCTTAGTTGGGAAACCATCGTAGTGTTGCATGTATACACAAAGGTACAGCTGAAGTTGTTTTCCCATGCGAGTCCCAGTGAATCGACCAGTGCGGCTTTGGTGGAATTGGTGCACAAGCTATCCAACTACATGCTTTACCTTTTGGCCACGCAGCACGAGATGTTGCCGGTCAGTAAAAGCACTAGTGAAAGCAATAGGGGAGTCGGAAGCCACTTTGCTAAGATCGATATTGAAGCAGCTGAGACCGAGATGCTGACAAACACGGGAGTGCAACTTCTCGGGTCCTGCACAAAAGAACAACTGCTGGAGACCAAGCAGGCGTGGCTAAGGCTCCTCATCTTCTTCGCTGGGAAGTCGCGGCCAGAGATGCACACGGCGCAGCTGGCCGCAGGAGGCGAGCTCCTTACCTTTGTCTGGTTGTTCATGGCCTTCAAAGATATCGGGGCTTCCGTCATCTCCCGGATCGAGATAAGTGATCTCCGAGTTCATATCCCTAGGCCTAGTTTAGTACTCTTCCGTCTCGGTCCCACTCTACACCAACCAGCAGCAGATCACACGGCCGACAACAGTAGTGATCAGCTCAAGGAAGAAGAAGGGCATCATCAAAATGAAATCTCTCATGTATGA</cdnaseq>

Protein Sequence

<aaseq>MAYMGADLVAAYALLASQGMDEDAVAAHQLVFVWAPFLLIHLGGQDTIIGFSLEDNNLWLRHLLNLVVQVVLALYIFWKSAIGPNMNKVELVMSILLFVTGTIKYGERTWALQYGVLITLAASLPRYALQLRNSFQKSLPICPGCDQDKYIGQLLDNADSGTNDDDDPFPEPLVLSIALCSMPSALRLFWDNDTICIVMNEWVLVRAYQLPKALEILEIELGLVYDYIYTKAVVFQTRRGIALRCISQASFLAVFLLFLRRRVWWSNSMGQYKQRNHLAKYDEEEKRSRSWSWKRGVVGGKIRKVVDAVCGEKVKFWISKQLDINFAKVDKEIIRCIFNKVVECAAEAHQSQNSLPAQEWSNLSVLLKNLLETPDGTLSWETIVVLHVYTKVQLKLFSHASPSESTSAALVELVHKLSNYMLYLLATQHEMLPVSKSTSESNRGVGSHFAKIDIEAAETEMLTNTGVQLLGSCTKEQLLETKQAWLRLLIFFAGKSRPEMHTAQLAAGGELLTFVWLFMAFKDIGASVISRIEISDLRVHIPRPSLVLFRLGPTLHQPAADHTADNSSDQLKEEEGHHQNEISHV</aaseq>

Gene Sequence

<dnaseqindica>1..54#846..851#5491..6207#6318..7250#7386..7433#ATGGCTTATATGGGAGCAGACTTGGTAGCTGCTTATGCCCTGTTAGCGTCCCAGGTGTGCTACAGCCTGCAGATGAGCCAAGGGAGGTAGCTCAGACTTGTCAGACAAGGCCTGTAAGAGCGCGTAAGAGTAATTCGTTTGTATCTGGGCCGGACTGGGCCAAATGAGCACCAGCTCCAGCTGTCAACATCTGTATCACGTGAGAGAGAGAGAGATAGAACTCTATTTGTATAAGTACTCTGTTCTTTTCTGAGATGAACTAAGGAAGAACACGGCGGCGAAGATGGCGGAGGCGCCGATCCTGTTAGATCTGGCGGAGAAAACTATCTGAGTTCTTGTTGTGCTTTTGGGGGTTGATCGATTGGAGTTAGGTAGCTAACAATCTGGTATCAGAGCCAGACCACCAAAATTTTTCTCTCCTCTTGATTCTTGCGGTAATTCCTGGGCGAGGTGGGGGTTGATTGCTTCGGCGATCAGATCCCGCAAAAGCTTTTGCTCCCTCAACTGGGTCCGCGAGTTCTCGAGGAGCGTTTCAGCCACGGCTGACTATGACAAGCCCCGCTACGTGATGAAGATGGCGGCAAAGGTCCTCGATCAGGACAGCAAACTCGATTTGCTCCTGAAGAAGATGGAGGACGTTGATCGCAAGCAGGAAGCAAGTGAGAAGCGACGGGAACAATCAGAAGAGAAGAGCCGCGCTGATTTCTTGGCCCTCAAGGTGGCGGTGGAACCCTGTTTTTCGGAAGTGGAGAAGCGTGTGGATCTTCTTCAAGAATCAGTGTTGGATTTGCAGGAGCAGGTGGATAAATTGCAGTCTCTGGTGAAATCTTTTCCGGCTGCTTCAGGGGATGGTAAGCTAAATTCATCATCCTTCTCCCCTACTACCCCTAAGGATCACTCTGTTTCGCTTTCCGAGATTTTGGCTGGGTCTGCGAGAATCAGTGGGAATGTTCCTCCTATGTGCTGCCCTCAATTTGATGGTGATAATCCTCAAATGTGGAAGAGTAATTGTGAAGAATATCTTGAGATTTATGGTGTTCATCCTCGCAATTGGGTTCGGGTGGCTGGTTTAAACTTCTCGGGCAATGCTGCTTTCTGGTTACAGTCCATGCGGCCCAAATTGGTGGGGGTCACATGGCAGGAATTTACAAACCAAGTTTGTCTCCATTTTACAAAGGACAGAAAAGAAGTACTTATTCGCCAATGGTTTCATATTGCTCAGGACTCGTCTGTGTCCGAATATGTTGAAAAATTTGATGGCATCATGCATCAGTTATTGGCTTACAACAGTTCCCTGCCTCTGAATTACTTTGTGACCAAGTTTGTGGAAGGTCTCAAACCTGCTATTCGATCTGGTGTTTTGATGCAAAAACCACAAGATCTAGATTCTGCTTGTTCTCTTGCCTTGTTACAAGAGGAAATTTTAGAAGGGTCTCAACCGATTCAGTATAAGAAGACTGATTATTCTGTTGTTTCTAAGTATACGAGCAGGCACTCCTCTCCCACTTTGTCAAATCCACCTGCTACAGTACCAGCAATTGATGACAAGAGAACCAATGTTGTTTTCTCTAAACCCAGAGATGACGAATTGTCTGCACTTAAAGCTTATCGACGGTCTAAGGGCCTTTGCTTTACCTGTGGTGAGAGATGGGGAAAGGATCACAAGTGCAGTACTTCAGTTCAGCTCCATGTTGTGCAGGAATTATTGGAAGTGTTACAATCTGATGAGTTGATCTCTGAAATTTTTGAAGAAGAGCCTTCCTAGCCTGACACTATTCTTATGGCCATCTCTCAACAGGCCTTATCTGGTACTGAATCTCCTATTTCCTTCAGACTCAGGGGTTGGGTGCAGGGTGTTGAAGTTCTCATGCTTGTAGATTCGGGTAGCTCGCATTCCTTTATTGACAACTCTCTTTCCCAGCAATTGCAAGGTGTCCAGCAGTTACCCAAATCTGTGTCAGTGAAGGTTGCTGATGGTGGTTTACTCTGTTGTTCTAAATTTATTCCTTATTGTGATTGGTGTTCTCAGGGTCATGTTTTTCAATCTGAATTCAAATTTTTGCCTCTGGGGACCTATGATGTTATCTTAGGCATGGATTGGTTGATGCAATTGGGACCTATGAATGTAGACTGGACCGCTAAATGGATGATGTTTCAGAAAGCTGGTAAAACAGTGAAACTCTTGGGAATTCAGGCTCAGACTAATAGTTGTCTGTCTATTACCGGTGAGCAACTCCAGGGTATGTTAAAATTGGGCTCTCTTATGCATATTGTTCAACTACAAGAGTCTGTTTCAGTCCCAGCTGTCCAGATTTCCCCAGCAATCCAACTGCTTCTTCAAGAATTTCAGTCCATTTTTGAGGATTCAAAAATTGATTCCTCTAGTTCCCAATTCCAAACCTGTCTTTATTCGGCCTTACAGACACAATCCTGCTCAAAAAGATGAGATAGAAAAACAGGTTAAGGAGATGCTTCTCTTTGGGGTCATTCAGCCTAGTACCAGTGCATATTCTTCTCCTGCTTTATTAGTTAAGAAAAAAGATGGTACTTGGCGCTTGTGTATTGATTACAGACAATTGAATGCTGTCACTCTCAAAAGAAAGTTTCCTATGCCAGTCATCGATGAATTGTTGGATGAGCTGTCTGGTTCTAAGTTATTTTCCAAATTGGATTTAAGGGCTGGGTATCATCAAATTAGATTGGTGGAAGGCGAAGAATATAAAACAGCCTTTCAGACTCACATTGGTCATTACGAGTACAGAGTGATGTCTTTTGGCCTCACTGGTGCACCTGCCACATTCCAAGGAGCTATGAATGCCACCCTGGCTTCTGTCTTGAGGAGATTTGCATTGGTCTTTTTTGATGACATTCTCATTTACAGCCCTGATTTAACTTCTCATTTGAATCATCTAAGACAAGTGTTTTCTCTTCTGTCTGAACATCAGTGGAAAGTTAAGCTCTTTAAGTGCTCCTTTGCTCAAAATCAGCTTTCTTACTTGGGTCACATTATCTCTGACAAAGGAGTCACCACTGATCCTGCCAAGGTTGAGGAGGTAGTCAATTGGCAAGTGCCTACTTCTCTGAAGAAATTAAGAGGGTTTTTGTGTCTTGCCGGCTATAATAGGAAATTTGTCCGCAATTTTGGACTTCTAAGTAAACCTTTAACTCAATTGCTTAAGAAGGATGTTCCATTTATTTGGTCCCCTGCAGCTGATCAGACTTTTCAGTCTTTGAAAATGGCTTTGGTGTCAGCACCAGTTCTTGCATTACCTGACTTTTCTCAACCTTTTACTGTGGAAACAGATGCTTGTGATGTTGGTATTGGGGCTGTGTTATCCCAACAGGGTCATCCTATTGCATACATTAGTAAAGCACTGGGAGTTAAAACCAGGGGTCTTTCTACATATGAAAAGGAATACTTAGCCATCTTACTAGCAGTGGATCATTGGCGTTCTTACCTCCAGCAAGGTGAATTTATCATCTTAACTGATCACCACAGTCTTATGCATCTAAATGAGCAACGAATTCATACTCCATGGCAGCACAAAGCATTTACCAAGCTTCTGGGACTTCAGTTTAAAATTTGTTACAGAAAAGGTAGCAGTAATGCTGCGGCAGATGCACTTTCTAGGAAGTATTCGGAGGATACTTGTGAGTTGCATGCTGTTTCTAGCTGTACTCCTGTGTGGCTGCAGGAAGTGAGTGATGGGTATCTCACAGATGATTTCTCGACTCAGTTGCTAGCTGATTTGGTTCTTTGTTCCACTTCTAGACCCATGTTTTCTTTGTCTAATGGTATTATCAAATACAAAGGGAGTATCTGGTTGGGCAATAATATAGAACTACAACAGAAAGTCATTACTGCCTTACATGCCAGTCCCATGGGCGGCCATTCCGGATTCCCAGTAACCTATAAAAGGATTAAAGCTTTGTTTGCTTGGCCCAAGATGAAGCAGGTGATTAAGAATGCTATTTCTGGTTGTTCTGTTTGTTTGCAGTCCAAGCCTGACAGGTCAAAATATCCAGGCCTGCTGCAACCATTACCTGTCCCTGAAGGTGCTTGGCAGGTTTTGACTATGGATTTTATAGAGGGTCTTCCTAAATATGGGAAATTCAACTCAATTTTTGTGGTTGTGGATAAGTTCTCGAAGTATTCCCATTTCATTCCTCTGTCTCACCCCTTCTCTGTTATTGATGTGGCTCAGGCATTCATGTGCAATATATACAAACTGCATGGATTGCCCAGATTTATTATATCTGACAGAGATAGGATTTTTACAAGCCAATTCTGGGAACAGCTGTTCACTCGATCTGGTACACGGCTGCAATTGAGTACTGCATACCACCCACAAACCGATGGACAAACTGAAAGAGTCAATCAATGTTTGGAGATCTATTTGCGCTGTTTTGTTCATGCCATGCCATCCAAGTGGAGTTCTTGGTTATATTTAGCAGAATTTTGGTTCAATACTTCTTATCATTCCACATTACTTAAGTCTCCCTTTGAAGTGCTATATGGATATCCTCCTGGTCATTTTGGTATTCGAGAGGATTCTTGCTCCATTCCTGATCTTCATGCTTGGTTATCTGAAAGGAAACTGATGACTCAGCTCCTGAAACAGCACCTCAACAGGGCTCAACAACAAATGAAAGTGTATGCTGATAAGAAGAGAAGCTTCAGAGAATTTGTTGTAGGAGATTGGGTTTACTTGAAGCTTCAGCCTTACATTCAGTCCTCTGTGGCAAGGAGAGCTAATCATAAGCTTTGCTTTAAGTACTTTGGGCCTTTTCAGATTCTTCATAAGGTTGGCAAGGTAGCTTATCAGTTGCAACTCCCTGCTGACAGTGCAGTCCATCCTGTATTCCATGTTTCCCAACTCAAGCATGCTGTTGGTTTTAAGCATCAGGTTCAGCCTCGATTACCCACCTTGTCCACCTTTCAAGTACCTGTGTCTGTGTTGGACTCTCGACAAATCAGGAAAGGTAACACTTCTCTGACTCAAGTCTTGGTTTCTTTGGTCCGATGATGGGTATGGTAAAGAGACTTGGGAAGACCTGGTGGAGTTGCAGCAAAGGTTTCCAAATGCATTGGCTTGGGAACAAGCCAAATCTCAAGAGGAGGGGATTGTTAGCGTCCCAGGTGTGCTACAGCCTGCAGATGAGCCAAGGGAGGTAGCTCAGACTTGTCAGACAAGGCCTGTAAGAGCGCGTAAGAGTAATTCGTTTGTATCTGGGCTGGACTGGGCCAAATGAGCACCAGCTCTAGCTGTCAACATCTGTATCACGTGAGAGAGAGAGATAGAACTCTATCTGTATAAGTACTCTGTTCTTTTCTGAGATGAACTAAGGAAGAACACGGCGGCGAAGGCGGCGGAGGCGCCGATCCTGTTGGATCTAGCGGAGAAAACTATCTGAGTTCTTGTTGTGCTTTTGGGGGTTGATCGATTGGAGTTAGGTAGCTAACATGCCCTAGGCCTCATCTCCCGACAGGATGAGGATGCCGTCGCTGCTCATCAGCTGGTTTTTGTGTGGGCACCATTCCTCCTCATACACCTTGGTGGCCAGGACACCATCATTGGCTTCTCCCTAGAGGACAACAATCTTTGGCTGAGGCATCTGCTGAATCTTGTAGTCCAAGTCGTCCTCGCCTTGTATATCTTCTGGAAGTCAGCCATTGGCCCCAACATGAATAAGGTTGAGCTTGTTATGAGTATCCTTTTGTTTGTTACTGGAACAATCAAGTATGGGGAGAGAACATGGGCCCTACAGTATGGGGTCCTCATAACTCTTGCGGCCTCTCTTCCTAGGTATGCTCTTCAGTTGCGGAACTCTTTTCAGAAGTCCCTTCCCATCTGTCCTGGTTGTGACCAAGACAAATATATTGGTCAGCTGCTAGACAATGCTGATAGCGGCACGAATGATGATGATGATCCCTTTCCCGAGCCCCTTGTTCTCTCCATTGCCCTATGTTCAATGCCAAGTGCCCTTCGCTTATTCTGGGATAATGACACTATCTGTATTGTTATGAACGAGTGGGTTCTCGTACGTGCCTACCAGTTACCTAAGGCATTGGAGATCTTGGAGATTGAACTTGGCTTGGTGTATGATTATATCTACACTAAGGCCGTGGTGTTTCAGACAAGACGTGGCATTGCACTTCGATGTATCTCACAGGCATCCTTTCTAGCCGTTTTTCTGCTCTTCCTTGTAAGCAATATACAGAGGCACAATTCAATTAACACTGTAATCACATATGCACTGTTTGTCGGTGATTTTGCGATTGTAGCTTCCTTGCCTCCATTGTTATGCGGTTGCAGAGAAGAAGGGTGTGGTGGTCGAATTCCATGGGGCAGTACAAACAGCGTAACCATTTGGCAAAGTATGATGAAGAAGAGAAGCGATCAAGAAGCTGGTCATGGAAACGAGGAGTAGTGGGGGGCAAGATCAGAAAGGTTGTGGATGCTGTTTGTGGGGAGAAGGTGAAGTTTTGGATTAGTAAGCAGTTGGACATCAATTTTGCCAAGGTGGATAAGGAGATCATACGGTGCATCTTCAACAAGGTTGTCGAGTGTGCTGCTGAGGCTCATCAAAGCCAAAATAGTTTGCCGGCCCAGGAATGGTCAAATCTTAGTGTGCTGCTGAAAAATCTCTTGGAGACTCCTGATGGCACTCTTAGTTGGGAAACCATCGTAGTGTTGCATGTATACACAAAGGTACAGCTGAAGTTGTTTTCCCATGCGAGTCCCAGTGAATCGACCAGTGCGGCTTTGGTGGAATTGGTGCACAAGCTATCCAACTACATGCTTTACCTTTTGGCCACGCAGCACGAGATGTTGCCGGTCAGTAAAAGCACTAGTGAAAGCAATAGGGGAGTCGGAAGCCACTTTGCTAAGATCGATATTGAAGCAGCTGAGACCGAGATGCTGACAAACACGGGAGTGCAACTTCTCGGGTCCTGCACAAAAGAACAACTGCTGGAGACCAAGCAGGCGTGGCTAAGGCTCCTCATCTTCTTCGCTGGGAAGTCGCGGCCAGAGATGCACACGGCGCAGCTGGCCGCAGGAGGCGAGCTCCTTACCTTTGTCTGGTTGTTCATGGCCTTCAAAGATATCGGGGCTTCCGTCATCTCCCGGATCGAGATAAGTGATCTCCGAGTTCATATCCCTAGGCCTAGTTTAGTACTCTTCCGTCTCGGTCCCACTCTACACCAACCAGCAGCAGATCACACGGCCGACAACAGTAGTGATCAGGTACGTACGTACGTAAACACTGCAGTCACTTGCTGCATACGAAATTTCCTCTTTCGATCGTTTCATTATTTTTTCTGTGTCTCCTTGAATTAATTAGCCTTGGTTGGTTGCTTGATATGATTAATTAATTTGCAGCTCAAGGAAGAAGAAGGGCATCATCAAAATGAAATCTCTCATGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016320