BGIOSGA016434

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Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016434| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016434, complete gene.| tag = OS04G04...")
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Gene Name

BGIOSGA016434

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016434, complete gene.

LocusTag

OS04G0430400

Ensembl Transcript ID

BGIOSGA016434-TA

Ensembl Protein ID

BGIOSGA016434-PA

Length

5610

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19250091..19255700

Sequence Coding Region

19250091..19250163,19251689..19252237,19253018..19253305,19253661..19253922,19253992..19254044
,19254132..19254199,19254417..19254506,19254628..19254718,19255102..19255700

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19250091..19255700 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19250091..19255700 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCGCAGGCTCCTCGCGCTGCTGCTGGTGGTGGCGGCGCTCCCGCTGCTCCCGGCGGCGATCGCGGCAGAGTGTCCGTTGGATTTGAGTTGGCCAAACTATGAACTGATGGCTTCTGTATGCTCGGATGAAAATGGACACTCAAAATGTTGCCGTTACATCAATGCTATTATTGCGGTCTCGTCTGCCATGTATGCAAATATGACAGGCATTCTTGGGGTCCCAGCCGAAATTTCTGATGCTTGCATTGGCAACATCTCTGACACATTGGTATCAAAGGGAATTCTGCCTACCGCCGCTTCATTTTGTGGCCTTGGGATCAAAATTCAAGTTTCCTATCAATGTATTGGGATGACTACCGTCCTCCAGATGTTACAGTCTCCGAATTTCAGTGATGTCACTAGGAGCTGTGCAACTCTACTTTCAGATGATGTCAGTTGCAAGAGGTGCTTAAACTCTGGTCTGTCATACCTCCGCCATCTTGTGGGAGAACAAGATAATGTCACATTGAATACCTGCCGTGATGCTGCCTTTGTTGCATTTGCAAGTCAAGGGAATATATCTACCGTTGATACGGCGAGTTGCTTTTTTAGCGTCCAGGGGCTTAGTGCTCTTCAAGTGAATATCTCCGTGCCATCCCCAGCTGGACTAATTGCACCGAATATTGCTCCCAGTCCACTTGCAATGCAAATTCCTGGGGAGCATGTTACTGGAGTGCTATCCAAGCATCATCGTAGTTACAAGCTTGCACTATTCCCTGCAATTGGGGCTTTGGTTACAGGATTAGCAGTTATACTAATGATAGTATTGATTTTACTCATCCGTAAAAAGAGTAGAGAATTAGAGAAGATTGAAGGAACTAACCCTCTTGATGCGTGGAGTTCCTGTTTGAAGAAGGGCCAAGAAGGTTCTTCCACCATTTTCGACAGATTTACTTACAGACAAATGAAGAAGGCAACAAGAAACTTTGGCACTGTGTTGGGAGGAGGTGAAAAGGGCACAATATTCAAAGGGAAACTGAGTGATGGTTCTGTGGTTGCTATAAGACGCATAGAAAGCTCGCCAAAACAAGGTCAGCTGGAATTTTGCAAAGAAATGGAACTTCTTGGGCGGCTGCACCATCGTCATCTTGTTGGACTTAAAGGCTTTTGTCTAACAAGATTTGAGAGGTTCCAGGTGTATGAATACATGGAAAATGGAAGCCTTAAGGATCACCTTCATTCGTCAGGTAAACGTCTTCTACCATGGAAAAACAGGATCCAAATTGCCATTGATGTTGCAAATGCTTTGGAGTACCTTCATTTTTATTGTGATCCTCCATTGTGCCATGGGGACATAAAGCCTAGCAATGTCCTATTGGACAGAAACTATCTTGCCAAGCTTGCCGTTTCTGGTCTTGTACAATGCTCAAATGGTGATAGTACCACCATCAGTTCCACCCTAGTGAACGTGAAGATCCCGGCAACTCCTGGCTACGTGGACCCTTGCTACGTGGTGAACCAGGTGGTGACGCCGAAGAGCGACGTGTACAGCTACGGCGTGCTGCTGCTGGAGCTGGTGACGGGGAAGCCCGTGGCGCAGGGCGACGACGATGGCAACGGCGACAGCAGCAGCAGGAGCAGCAGCAAGAACCTCGTGGAATGGTCGCGCGAGCTGATCGGCACGGACTACCGGCTGCACGAGCTGGTCGACCCGGCGGTGGCCGACGCGTTCGACCTGGACGAGCTGCAGGTGATGGCCGATGTGATCCACTGGTGCACCCACCGGGACGGCGCCGCGCGGCCGTCGATGAAGCAGGTGCTCCGCATCCTGTACGAGCGCCTGGACCCGCTCTCCGGCGGCCTCGCCCGCGCCGTCGCCGGCGAGGAAGGGTACTACTACGGCGGCGGGCAGAGCGGGCGGAAGGGGAAGGAGGGCGCGGAGATGCTGGCCGGCGGCGGCGGCGACGGTGGTCGGTGCCTGCCGTCGTCGTCGAGCACGTCCAGGTCGTACTGCAGCCGCAGCGTGCTGCTTGAGTGCAACTCGCCGGAGGAGGCGCCGCCCCAGTCGTCGCCGCGCGGCTTGCCGTGA</cdnaseq>

Protein Sequence

<aaseq>MRRRLLALLLVVAALPLLPAAIAAECPLDLSWPNYELMASVCSDENGHSKCCRYINAIIAVSSAMYANMTGILGVPAEISDACIGNISDTLVSKGILPTAASFCGLGIKIQVSYQCIGMTTVLQMLQSPNFSDVTRSCATLLSDDVSCKRCLNSGLSYLRHLVGEQDNVTLNTCRDAAFVAFASQGNISTVDTASCFFSVQGLSALQVNISVPSPAGLIAPNIAPSPLAMQIPGEHVTGVLSKHHRSYKLALFPAIGALVTGLAVILMIVLILLIRKKSRELEKIEGTNPLDAWSSCLKKGQEGSSTIFDRFTYRQMKKATRNFGTVLGGGEKGTIFKGKLSDGSVVAIRRIESSPKQGQLEFCKEMELLGRLHHRHLVGLKGFCLTRFERFQVYEYMENGSLKDHLHSSGKRLLPWKNRIQIAIDVANALEYLHFYCDPPLCHGDIKPSNVLLDRNYLAKLAVSGLVQCSNGDSTTISSTLVNVKIPATPGYVDPCYVVNQVVTPKSDVYSYGVLLLELVTGKPVAQGDDDGNGDSSSRSSSKNLVEWSRELIGTDYRLHELVDPAVADAFDLDELQVMADVIHWCTHRDGAARPSMKQVLRILYERLDPLSGGLARAVAGEEGYYYGGGQSGRKGKEGAEMLAGGGGDGGRCLPSSSSTSRSYCSRSVLLECNSPEEAPPQSSPRGLP</aaseq>

Gene Sequence

<dnaseqindica>1..73#1599..2147#2928..3215#3571..3832#3902..3954#4042..4109#4327..4416#4538..4628#5012..5610#ATGCGGCGCAGGCTCCTCGCGCTGCTGCTGGTGGTGGCGGCGCTCCCGCTGCTCCCGGCGGCGATCGCGGCAGGTGAGCTCTTTTGTACTACTTTTTAATGGCGGGGCTCCTCCTCTTCTTCCCTTCACCGTGTCACAGGTTCCCTTCTCTGGGTCGCCGCCGCCGCCGGAATCCCGCTGCTGGCTCCTCTCTCTCATCGAGCGATGATCTCCGCGACTGGAGCGGCCTTGGCTGGTCGCCGCGGCGGAGCTGTTGCGACTTGCGCAAGTAGCGCCAGCAGCCGCGCACGTCGCTCGAGAAGCGATTTTTTTTTATATCTTATTTTAATTATTATTCAGGCGTCGATTCCGCTTCTAGTTTCAACCATTCCCCGCGATTTTTCGTCACCATTCTACTCCGATTACTGCATTGTAGAACCACATTTTTGTCATGCGAGAGTTGATTAATTAGAGCTTTTTTTTTTTTTGGGGGGGGGGGGAGGGGCTGATTTCACCGGTGGTTATTATCCCTCGCCGGAGAGCAATCCCTAACCACAAAATGGCACGAACAGCATGCATCGTCTTCCTGCTTCCTGCAGCGTTCGTCAGCCGATGCCGGTAAAGGGGACTGTACTACTCGCAATGGGGGTTGACGGGTTGTCACGCCATTGAATTCCCCTCACCTAATGGGGCTCACTCACTCACTGATGAACACTGTACAATCAGAGTGTGGGTGGTGGTGGTGGCTTGGCTTTGCATTTCGTTCGTGTTCCAGGGCTCCTCCCCACGCTCGCCGTACCATTTGGATTTAGCTGGCCGGTGAGGAAGGTCCCGGGTCCTGGCAATTTAGTAGTGTTATTGGATCACTTATTAGATCGGCTTGATCGTGCAGTCTTACCTGATGTTCCCTTCCGCATCACATGGGTTGTTCTTGACTTCTTGTGTTGTGTGTGCCGTGCTAGGCTACTGGTGTACGGTACGGTGTAGCAGAATCGGTTGGGTTAATGAAGTTTTTGATACACTCTCCCCCCTTGTATGGAAGTACAAGTACGCCACATTCTGCTGGTAGTTCTTATTAAATGTGGGGGGTAAATGGAGATTTGGGAATTGATGGCAAGTGATCAAATGGAAGGATAATGTGCTAGTACTGGTCATGTGATCTGGTCCTGGCGGTACTGATTTCATTTCCTGTTAATAAGTAATGATCATGATTGATGGCGTAGATAGCTAGCATTGGCTACCTGCAGAGCATTACATGTTTTGCACTTCCTGTGTAATATTACTGGTTTTAGTAGATATGCAGCAGAGTGATGAGGCTGACCTTCAGATGCTATTCAATTTACGCCAATAGATGGGTAATGTGCTAGTGCTAGTACTGGTCACGTGGTCCGTTCGTGGTGGTACCGATTTCATTTTTTGCTATACATATGATCGTGATTGATGGCATTGGTATAGATTTCGAGCATTGGCTATCTGCATTGCATTACACATTTTGCTGTTTCTGTTAATGTTCCCGATTTTAGTAAATATATATACAGAATGGTGGGGCTGCATGTTAACTTTGTGGTATGTGTTGTATACTATTGCATGATCTTTATAATTTCTTTGTTGACATGCAGAGTGTCCGTTGGATTTGAGTTGGCCAAACTATGAACTGATGGCTTCTGTATGCTCGGATGAAAATGGACACTCAAAATGTTGCCGTTACATCAATGCTATTATTGCGGTCTCGTCTGCCATGTATGCAAATATGACAGGCATTCTTGGGGTCCCAGCCGAAATTTCTGATGCTTGCATTGGCAACATCTCTGACACATTGGTATCAAAGGGAATTCTGCCTACCGCCGCTTCATTTTGTGGCCTTGGGATCAAAATTCAAGTTTCCTATCAATGTATTGGGATGACTACCGTCCTCCAGATGTTACAGTCTCCGAATTTCAGTGATGTCACTAGGAGCTGTGCAACTCTACTTTCAGATGATGTCAGTTGCAAGAGGTGCTTAAACTCTGGTCTGTCATACCTCCGCCATCTTGTGGGAGAACAAGATAATGTCACATTGAATACCTGCCGTGATGCTGCCTTTGTTGCATTTGCAAGTCAAGGGAATATATCTACCGTTGATACGGCGAGTTGCTTTTTTAGCGTCCAGGGGCTTAGTGCTCTTCAAGGTTTGAATTCTGTACACAAATTATTTTTTATTTGATGACCTTGTTGATACAAACAATATCTTTTTCTTTAATAGAGAGCTTCACTTCGGCCATGTTGACTATTCGCATCTGTTATAGCCTTATAGGATATAACCTTTTTGACAATTTGTAGAGGCAAAAGCATTTTTCTTCTATTATGTTTCTAGTGCATTCCATTGTTCCACGTGATCTCCAGCTCATGTGTTCTGTTGACATTGCTTCGGATCCTGAGGAGCAATAGTAATAATGATATGCCATTTGACAACTTGTAGAAGCATGGGATTTTTTTTGTTTCATTAGGGCTAATGAATTACATAAGCTCCACATGATCTCCACAATTGTTCTTTGAAAAGCTTCATACATGCAGCATTGCTGTGCATGTCCATGCTCTCCTAATATATGCAATAATAGGTATATTAATCAGCACATGCTACTAAAATTTTCATTTATTAGAATCAACCATCAGCAGAAGCTATAATTTCATATCCTTATTGATGATAATATGTGTGGCGAAAATCTTGTCATATTAATGTTAAATCTTGTATTTGTTGGTAAGATGATACATTCCACCTAAAATATGATATGTTATCTTCTGTTATCAGTTTTTTCATTTACAATACAACATAATATGTTTGTGTAGAAATAAGTTAGGTCATTAGGTCTAGTAGAAGTGAAGTGGACCATTTGCTTGTTATTCTTCGATTCATCTTTCTCAAGGTTTGAGTCCACAATGTTTTAATAAGTGATGTATCTATGATGCAGTGAATATCTCCGTGCCATCCCCAGCTGGACTAATTGCACCGAATATTGCTCCCAGTCCACTTGCAATGCAAATTCCTGGGGAGCATGTTACTGGAGTGCTATCCAAGCATCATCGTAGTTACAAGCTTGCACTATTCCCTGCAATTGGGGCTTTGGTTACAGGATTAGCAGTTATACTAATGATAGTATTGATTTTACTCATCCGTAAAAAGAGTAGAGAATTAGAGAAGATTGAAGGAACTAACCCTCTTGATGCGTGGAGTTCCTGTTTGAAGAAGGGCCAAGAAGGTAATCATTTCATGAGCTATGGCTGTACTGACATTCATACATGAATATTTATTCATTTATTATATGGCTGGATGGTTTCTGTGTGTTCATGATGCTATATTGCACACCAGGTCTGTTATTTTAGGGCTAACTTCACATGAAATTTCTTAAAGCGTAATGGCTTTGCATTCCTATTCTCCTGTGGCTGTGGATATGTGCAATAGCAGTAAAACTGATTTATTAGTGTGGGGTTTACAACTTAGGAATTCATATGGTTAATTTGAATTTGATGAACTAACATTTGACAACTTGCATTACAACTAGAATCAGTTCTAAGACCCATCCAATTTATCTGCTTAACATGATATTTTTTCAGGTTCTTCCACCATTTTCGACAGATTTACTTACAGACAAATGAAGAAGGCAACAAGAAACTTTGGCACTGTGTTGGGAGGAGGTGAAAAGGGCACAATATTCAAAGGGAAACTGAGTGATGGTTCTGTGGTTGCTATAAGACGCATAGAAAGCTCGCCAAAACAAGGTCAGCTGGAATTTTGCAAAGAAATGGAACTTCTTGGGCGGCTGCACCATCGTCATCTTGTTGGACTTAAAGGCTTTTGTCTAACAAGATTTGAGAGGTAGAGTATGTTATACATATTTTTGGGTATCTAGAAATCCATGGTTCTTTACAGTTTCTTATTATCCAGGTTCCAGGTGTATGAATACATGGAAAATGGAAGCCTTAAGGATCACCTTCATTGTAATATTTTATTTTCACTCCCAATCGTTAGTCTCACACTGCATAATCTGGTGAATTGTGTGCATAAAAGCAATTTTCTCTTTGCAGCGTCAGGTAAACGTCTTCTACCATGGAAAAACAGGATCCAAATTGCCATTGATGTTGCAAATGCTTTGGTAAGTCCTGGAATCTGGATTCTTTATTAGCTCAAGTAGTACATATTTCGTAGACTTTTTTTTGTACCAAAGCAACAATTGAATACTTGGTGTTAGGCCTATTAACCTGCTAAAAACTTGTTTCGCAAAAGAAAACCTGCTTAAAACACTTACGTTACTTAAGTACGTTATTTAAATGCTGACGAATAACTGCTACAACCAAATATTTTGCTCGCAGGAGTACCTTCATTTTTATTGTGATCCTCCATTGTGCCATGGGGACATAAAGCCTAGCAATGTCCTATTGGACAGAAACTATCTTGCCAAGGTACTTGACGTGAAACTTTCCTACAGTGAGAACAATTAATCCCTACTCTGCTGGCAGCAGATACTTGTTTTTGAATTAACAGGGCTGATCAAGATACTAATGGCTGGTTCATTTTCCATAGCTTGCCGTTTCTGGTCTTGTACAATGCTCAAATGGTGATAGTACCACCATCAGTTCCACCCTAGTGAACGTGAAGATCCCGGCAACTCCTGGTAAGTCCAACATCTGCCTTTTTGGTGTATTCTTCACCTTTGTCAGCATCATTTCCGACAAATCAAACACACAATACATGTTTGACATGACAATGGTTCAATTTGAAAACACACTTTCATCAAAAGTAGTGGAGCATGAACTTAAAGTTGGATAAAATTTTGGATACTCGTGGCACGCTTTTCAAACTGCTAAACGATATGTTTTGTATGCTCTAAAGTATCAAATTAATCTATTTTTCAAGTTTGTTATAATTAAAACCCAATCAATAATATATTAATATTATTTCGTATTACGTAAAACACTTAATCTTCGTCTTCAAAAGAAAAGAAGACCACCTTAGAAGCGATTTGAAATTTGATAGCAATAGTTTTGTGTGGTGCAGGCTACGTGGACCCTTGCTACGTGGTGAACCAGGTGGTGACGCCGAAGAGCGACGTGTACAGCTACGGCGTGCTGCTGCTGGAGCTGGTGACGGGGAAGCCCGTGGCGCAGGGCGACGACGATGGCAACGGCGACAGCAGCAGCAGGAGCAGCAGCAAGAACCTCGTGGAATGGTCGCGCGAGCTGATCGGCACGGACTACCGGCTGCACGAGCTGGTCGACCCGGCGGTGGCCGACGCGTTCGACCTGGACGAGCTGCAGGTGATGGCCGATGTGATCCACTGGTGCACCCACCGGGACGGCGCCGCGCGGCCGTCGATGAAGCAGGTGCTCCGCATCCTGTACGAGCGCCTGGACCCGCTCTCCGGCGGCCTCGCCCGCGCCGTCGCCGGCGAGGAAGGGTACTACTACGGCGGCGGGCAGAGCGGGCGGAAGGGGAAGGAGGGCGCGGAGATGCTGGCCGGCGGCGGCGGCGACGGTGGTCGGTGCCTGCCGTCGTCGTCGAGCACGTCCAGGTCGTACTGCAGCCGCAGCGTGCTGCTTGAGTGCAACTCGCCGGAGGAGGCGCCGCCCCAGTCGTCGCCGCGCGGCTTGCCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016434