BGIOSGA016450

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Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016450| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016450, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016450

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016450, complete gene.

LocusTag

OSJNBA0006B20.1

Ensembl Transcript ID

BGIOSGA016450-TA

Ensembl Protein ID

BGIOSGA016450-PA

Length

4852

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19680386..19685237

Sequence Coding Region

19680386..19680500,19680611..19680950,19681431..19681512,19681992..19682147,19683258..19683431
,19683572..19683643,19684376..19684447,19684560..19684678,19684779..19684864
,19684954..19685006,19685145..19685237

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19680386..19685237 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19680386..19685237 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGTCATGTCCGCCGCCGACGACGCGGGCGCGGCGTCCGGCCGGGAGGACCCACCGCCAGCCGTGGTGCTCGTCTCCGCCGGCGCCAGCCACTCCGTCGCGCTCCTCGCGGGCAATGTGCTGTGCTCGTGGGGGAGAGGGGAGGACGGGCAGCTCGGGCACGGGGACGCGGAGGACCGGCTGGTGCCGACGGTGCTGAGCGGCTTCGACGCCGCCGCGCCGGGGATCACGTCGGTCATCTGCGGCGCCGACCACACCACCGCCTACTCCGAGGACGAGCAGCAGGTGTACAGCTGGGGCTGGGGAGACTTCGGGAGGCTCGGCCATGGCAACTCCAGCGACGTGTTCACTCCTCAGCCAGTCAAGGCCCTGCAGGGGATAAAGATCAAGCAGATAGCTTGCGGCGATAGCCATTGTCTTGCCGTCACTATGGCAGGTGAAGTGCAAAGTTGGGGGCGCAACCAAAACGGACAGCTTGGTCTTGGAACCACTGAAGACTCATTGCTCCCACAAAAGATTCAATCTTTTGAGGGAGTTTGTGTGAAAATGATTGCTGCTGGTGCTGAACATACCGCTGCAGTAACTGAAGATGGTGACCTCTATGGATGGGGCTGGGGTCGATATGGAAACTTGGGGCTTGGTGATCGCAATGATCGGTTGGTACCTGAGAAAGTATCTTCTGTGGAGGGAGAGAAGATGGTGCTTATTGCATGTGGATGGCGCCATACAATTACTGTTTCTTCCTCTGGTAGTTTGTATACTTATGGTTGGAGCAAATATGGTCAACTAGGGCATGGTGATTTTGAAGATCATTTAGTTCCACATAAACTAGAGGCCTTAAAGGATAGCTCTATATCGCAGATTTCAGGTGGATGGAGGCATACAATGGCGCTTACATCAGATGGAAAGCTTTATGGTTGGGGGTGGAACAAGTTTGGGCAAGTCGGAGTTGGTGATACTGATGATCACTGTTTCCCAGTACAGGTCAAGTTTCCAGAGGATCAGAAAGTTGCCCAAGTTGCTTGCGGGTGGAGGCATACTCTTGCATTTACAGAAAAGAAAAATGTTTTCTCATGGGGGAGGGGTACTAGCGGACAACTTGGTCATGGTGAAATAGTTGACAGGAACAAACCTGTGATGATTGATGCCTTAAGCCCGGATGGTCCTGGCTGCAAGAAATTAGAGCCATCAACAGCTGTACCATTTGCAGCCAAAGTCTGGGTCTCGCCATCAGAAAGATATGCCATTGTTCCTGATGAAAAAGTTCCAAATTCAGGTGAAGGCACGGCACGAGGCAACGGGGCGGACGCAAATGTACCAGAGAACGATGTAAAGAGGATGCGTGTGCATTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MDAVMSAADDAGAASGREDPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPFAAKVWVSPSERYAIVPDEKVPNSGEGTARGNGADANVPENDVKRMRVHS</aaseq>

Gene Sequence

<dnaseqindica>1..115#226..565#1046..1127#1607..1762#2873..3046#3187..3258#3991..4062#4175..4293#4394..4479#4569..4621#4760..4852#ATGGACGCGGTCATGTCCGCCGCCGACGACGCGGGCGCGGCGTCCGGCCGGGAGGACCCACCGCCAGCCGTGGTGCTCGTCTCCGCCGGCGCCAGCCACTCCGTCGCGCTCCTCGGTAAGCGTCCTTCGGGGCGGGGGAAGCATTTCGTCGAACGCCTTGCCGGCGCTTCTATCTAAGCGGGCGTTTGCCTTTTTCTTTTCTTTTTCTTTTTTCCCGTTTTGCAGCGGGCAATGTGCTGTGCTCGTGGGGGAGAGGGGAGGACGGGCAGCTCGGGCACGGGGACGCGGAGGACCGGCTGGTGCCGACGGTGCTGAGCGGCTTCGACGCCGCCGCGCCGGGGATCACGTCGGTCATCTGCGGCGCCGACCACACCACCGCCTACTCCGAGGACGAGCAGCAGGTGTACAGCTGGGGCTGGGGAGACTTCGGGAGGCTCGGCCATGGCAACTCCAGCGACGTGTTCACTCCTCAGCCAGTCAAGGCCCTGCAGGGGATAAAGATCAAGCAGATAGCTTGCGGCGATAGCCATTGTCTTGCCGTCACTATGGCAGGTGAAGTGCAAAGGTGAGTGAAGATCGCTGTAAACAGCCATCTGCCCATACTATTTACTGTATATAACTCCAGGATTGTATAGTATGGTTGTCATGTGATCTTGTTTAAAGCTGCTTATCAGCAACCAAAACATAATTTATGGGTAAAGCTTTTATAGTTATTATGTCCTTAGTGATTTAAAAGTCAATGCTAAAAAATAAGGCATGATGAGAAAAAAAAATCCCAAAATCTACTTCAAAATTAAATTTTAAAATTCAAATTTAGAAGCCGCAGGGCAAGTGATGGGATGCAGCTGCTGGCAACTTTTATAAATGATGTTTTTGTTTTTCTATATTACCAGAAGGATGATCTGGGAATTCGAAGGGTTGTGCATATTTTTTTTTGGATGAATATTGAATAGTGGCAAATTCTTACATTATTCTGTTGTGTTGCGATTTCTGAGTTTTGGGTGACTGCTGTTTGCACTGATCTTCTCATGACTTTTTGTTTTAGTTGGGGGCGCAACCAAAACGGACAGCTTGGTCTTGGAACCACTGAAGACTCATTGCTCCCACAAAAGATTCAATCTTTTGAGGTAGAATATTGTGTATCATATTCATATAATTATACATATTAGAATGTTGTGTATCATATAATTATGTATATCATAAAAAGGATAGTTTTAGTACTACCTCACCGTTTATTGATATTTGTGCATGGAAATAGTATACGAATACATTGTGCTAAGGAAGAGTGTCATGTGAAAATCACTGGTATGGTGGCATCCATTACGCAGTCTAGTGCAAATCTTTGGTCATCCCTGTACTTATTAACTAAATTTTGTACTCCATATCATGAGGTGGACTGCAGGTGTAGATCCTCTCACGTTATTGTAACAGTTTTACTCTCCAATATAGACAGCACCCAGAGACAATAAATAATATGTTCATGTAATAATAATCTGAACATCCTGGCCCACTTATTACGTGTTGCTTCAAAGAGAAGGAAGATGGATAACTTTTAGATTTTCTCAATACACTATGCACTGTTGCTAATGGTCTAACATATGTATAGGGAGTTTGTGTGAAAATGATTGCTGCTGGTGCTGAACATACCGCTGCAGTAACTGAAGATGGTGACCTCTATGGATGGGGCTGGGGTCGATATGGAAACTTGGGGCTTGGTGATCGCAATGATCGGTTGGTACCTGAGAAAGTATCTTCTGTGGAGGTAAATATTCTAACAAGCTTGCCCTTCGCATCCCCTCCTTTCAAATTCCTTCAATATTTAATTCATTAAAAAGGAATATTCCATCCAATTTCCAGAATATGTTTTTGAAGATTCCATCCCTATATGCTACTGGACTGTATTGTCAGTCAGTCACCATATCACTGTTATCATAGAGTTAAGAATGAGTTGAAGGAGACAAGATCCTTTTATTTTGTCAGTCATTTTCTCAATACACTATTAAAAAACAAGATATTTCCTACATAGTTCAGAGCATCCTGTATTTTGTTATCACCTTATATTCCAAAGCATTATTAGAATCAGAACACCTAAGCCAATCATTTTCTTATGTGGAATTCAATGGAATACAATATGGTCCTAGAGTCAATTAATTGAAGCTAGATACACTCATCTACTTATCCAGTAGTGATTTATCCTTGGAAACTCTAATCATAGGTTGCTAGTATTATCACCTTTTATGGTTTTCGCAAAGGAAAGGCACTTGTACTAATCAGGGACAGGGAAACTGCTGGGGAGTGGCTGGTCACAGGCCAAGAAACCAAAACCAGCTGGTTCTGGTTTTCCAACACCCTTCAAGGCCACCATTCTCCACCCAAACCTCCACATCTCTTAACCACATTATCATGAACTATACCAAAATGCTTAGAAATGATTGTAGGTCATATCACTAACATCGAATTGAAACTTGAGAAGAACAGAGAGAGCCAAATTATTTCCATGCATATCAGAACTTGTCGGTTCTCATTTTCAATCCAAAAATGTTTTCTGCTCCTACTGTCATCCAAGTATTGAGCCAGAGTGTATTAGCTGATTTGTCAATTGGAAGTTGTCACTGAGCTGCACATGTGCAAAATGGTTTATAACTGATCTATTTTATTTATAAATTGATCAAACCACAAGGATCTATTTCTGTGAAATAAATTGTAGATACACTTCTCTGAAGTTTCATATTATAATATCTTGAATTATTATGGGCTTATGTCTGCTGCCATGTGGTTCATTTGATCCTCTTTTTCGTATGCATTTTGATAGTTTTATCTTTGTTTTTGTGTTTCCATGTTTGTTGTCGTCTTATTATTTGATCTTTTGTAGGGAGAGAAGATGGTGCTTATTGCATGTGGATGGCGCCATACAATTACTGTTTCTTCCTCTGGTAGTTTGTATACTTATGGTTGGAGCAAATATGGTCAACTAGGGCATGGTGATTTTGAAGATCATTTAGTTCCACATAAACTAGAGGCCTTAAAGGATAGCTCTATATCGCAGGTACACTCGCTAGCACTAACAATATTCTGGGAACTATGCTGAAGTTCTTGGCCTGTTTCCTCTGATGATTGTCAGTATATATTTGCCCTTTTCTCTTGGAATTTCACACGTCTTATTTACAAAGTATTCTACTAATTTAGATTTCAGGTGGATGGAGGCATACAATGGCGCTTACATCAGATGGAAAGCTTTATGGTTGGGGGTGGAACAAGGTAGGTCATTATCTATGTGCCTCTACTTATATTTTTGTCCCAGGTTTATTGTCTTGTTAGAAATCAACTGCACGATCAAAGCCTTCCAATTTCATGGTTTTATTGATTCTATAGCCTGGTGCCTATAAAAGAAAATGAGAAATTCTAAGAATCTTGTATGCACTTGTGTAGTTTCTCTTCCATGGTGAATAAATGTCATGATGATTGGAAATCTCTTAACAAACAAAAGAAGACGAACAATATTTTCTCCCGAACTTAACAAGCTGAGTTTCAACCTTCGGGATATCAACACTTTTTTTCTTTCTGTGAGCATCATGGGCCTCTTGGCAAATCATGCACCCATTTCGACTTCCACCAGTACCATCCACTGCGAGTCCATTGTCTAAGGGACTAAAAGACGCTTCATGCTCCCCAAACCCCCCTGCTATCATCCACCCCAGACCTGATGCTGACTTGTGCCAACTAACTGGAAACATTTTGTGGCATTCTTTTACAAGTCAATTTTGAGGTAACGTGAGTTACGTGATTAGTGATAAGCTCAGGTTGTCTTTATCACTAAGCATAGCTCTGATTTGTATACGGAGCCTAGCTTGCTTGAGTTCCAGTTCTACCGGCTGCAGTCCTAGATATACCATCAGTTTGACATATAATGTTTCAAAAATGTTTACTTTCTTTTGAACTGGTAATTTACCATTGTTTTTACTGATTCTACCTCATACTTCGGATATGCAGTTTGGGCAAGTCGGAGTTGGTGATACTGATGATCACTGTTTCCCAGTACAGGTCAAGTTTCCAGAGGATCAGGTATGGCATATATCTGGAGGAATAAATGAACTATTGAAGCATACAAGTCATAATCACAATATTTATGCTCAATCAAGAACTTGATGTTCCATTTCTTGTGTTGTTGCTGCAGAAAGTTGCCCAAGTTGCTTGCGGGTGGAGGCATACTCTTGCATTTACAGAAAAGAAAAATGTTTTCTCATGGGGGAGGGGTACTAGCGGACAACTTGGTCATGGTGAAATAGTTGACAGGTGTTTCCTATCAATATTTCTGTACCCATAATATCTTGCTCCCAAAATGAATCATTTTTGGTCTTCTGTAAATTAACAATCTACCATTCTGAATCTGAAGGAACAAACCTGTGATGATTGATGCCTTAAGCCCGGATGGTCCTGGCTGCAAGAAATTAGAGCCATCAACAGCTGTACCATTTGCAGGTTGGTCCCAACGTGTTCTAGCTATTGCAGCTTGCCAGCTTGCAGATACTAGCAGTTGCATGACTAATGGTGCTTTCTGCTGTTTTCAGCCAAAGTCTGGGTCTCGCCATCAGAAAGATATGCCATTGTTCCTGATGAAAAAGTGAGTTCCTTTGTGTACTTGAAGCCCTTTATTCTCCCACAAGAACACGAACAGTTAAAATCAAACCATTACACGGCACTTATAATCTGATACTATACTAGAACTGTTACTGAAGTTCTTTTCCTTCTTTACCTGTAGGTTCCAAATTCAGGTGAAGGCACGGCACGAGGCAACGGGGCGGACGCAAATGTACCAGAGAACGATGTAAAGAGGATGCGTGTGCATTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016450

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016450&oldid=65344"