BGIOSGA016465

From RiceWiki
Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016465| Description = OSJNBa0064D20.7 protein| Definition = Oryza sativa Indica Group BGIOSGA016465, complete gene.| tag = OSJNBA0064D20.7|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016465

Description

OSJNBa0064D20.7 protein

Definition

Oryza sativa Indica Group BGIOSGA016465, complete gene.

LocusTag

OSJNBA0064D20.7

Ensembl Transcript ID

BGIOSGA016465-TA

Ensembl Protein ID

BGIOSGA016465-PA

Length

3524

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20128165..20131688

Sequence Coding Region

20128165..20128714,20129208..20129482,20129708..20129872,20129940..20130029,20131314..20131688

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20128165..20131688 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20128165..20131688 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAAGTATATTGGCTCGATGATTTGGAGCTAATAATGGGCTATACTGTTAAACTTGCTCGAACAGGTGAAGCGCACCACGCTGCAAATCTCTTCGCCGTTTCGGATTCCACACTCTCCAGCTTCCGAGGCAAATCTCTCTCCGCCGCTTGTATTAATCACGTCCTCCTCCATTCGCCTTCATCTTCCTCGCTTCTCCCAACTCGAAAATTCCCAGTTTCTCTTTCAGTTTCAGCTACTCCGGTGATCTCTCAGCTCTCGATCGATCCCATCATGGGCGGCGGCGGCGGCGAGAATCGCGTCGACAACCACGACGACGACGACGACGACTGGGAGCTGGCCGCCGGCGCCGCGCTCGCCGACGTCACACTCGTTCTCGTCGGGAAGGTCGGCTCCGGGAAGAGCGCGACGGCGAACAGCATCCTTGGAGACGAAGCGTTCGAGTCCAAGTGTTCCTATGCCGGTGTCACGCAAACCTGCCAGAAGAAGAGCACCACGGTTCAGGATGGCTGCTTGATCCGCACTATCAACGTCATTGACACTCCAGGTTTATTCGACATGGACATTAAAGCTGAGGATGTGCGTAGAGAGATCGTCAAGTGTATGGACATGGCCAAAGATGGGATACATGCGATGCTCATGGTTTTTTCAGCAACATCTCGCTTTTCCTGTGAAGATGAGAAGACGATCGAGACTCTGAAATCGTTCTTCGGCGATAAAATCCTTGACCATATGATATTGGTTTTCACACGCGGAGATGAAGTAGGTGGGGAGACCAGTTGGAAAAATATGTTATCTGACAGTGCCCCTACATATCTTCAGGACATTCTCAAGTTGTTTGAAAATAGGGTGGTTCTTTTCGAGAATAAGACCAGTAGTACTCAGGACCGCCAGGCGCAGCGGAAAAAAATGCTTGATGCAGTGGACTTTGTCGTATCAAGCAATCATGGGAAACCATTTTCAAATCAGCTGTTTACTCAGATTCAGGAGGTGCATCACAGACAGAAAGATGCCAATTCTGAGGTGTATTCATCAATGCAAGAGACTGACAGTTACATTTCACTCATAACCAAGATGGTAGAAGAAAAGCTAAACGGTACAATCCTGAGGATGGAACAACAGCTTCTGAAAGAGCAGGAAGCGAGGCTGGATATACAGAACGAGATGACGAAGGCAATCCTAAGATCAGAAGAGGACATCAGGAGACTGAGGCTGAGCCTAGAGAAGGCTGAACAAGAGAGTAACAATGCTCGAGAGGAAAACAAGAGATTTAGAGAATCGGAGAAGGCTAGTAAAGAACAGGAGAAGCAAACAGAAGCTGAGATTCAGAAGCTTAAAGAGAAGATGGAGAAGGACAGAGAAGAAAGGGAGGAGGAGATTCGCAGGCTTAGAGATGATCTGGAGAAGGAGAGAGAAGAAAGGCAGAAACANAGCGGTTGCATCATTCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MEEVYWLDDLELIMGYTVKLARTGEAHHAANLFAVSDSTLSSFRGKSLSAACINHVLLHSPSSSSLLPTRKFPVSLSVSATPVISQLSIDPIMGGGGGENRVDNHDDDDDDWELAAGAALADVTLVLVGKVGSGKSATANSILGDEAFESKCSYAGVTQTCQKKSTTVQDGCLIRTINVIDTPGLFDMDIKAEDVRREIVKCMDMAKDGIHAMLMVFSATSRFSCEDEKTIETLKSFFGDKILDHMILVFTRGDEVGGETSWKNMLSDSAPTYLQDILKLFENRVVLFENKTSSTQDRQAQRKKMLDAVDFVVSSNHGKPFSNQLFTQIQEVHHRQKDANSEVYSSMQETDSYISLITKMVEEKLNGTILRMEQQLLKEQEARLDIQNEMTKAILRSEEDIRRLRLSLEKAEQESNNAREENKRFRESEKASKEQEKQTEAEIQKLKEKMEKDREEREEEIRRLRDDLEKEREERQKXSGCIIL</aaseq>

Gene Sequence

<dnaseqindica>1..550#1044..1318#1544..1708#1776..1865#3150..3524#ATGGAGGAAGTATATTGGCTCGATGATTTGGAGCTAATAATGGGCTATACTGTTAAACTTGCTCGAACAGGTGAAGCGCACCACGCTGCAAATCTCTTCGCCGTTTCGGATTCCACACTCTCCAGCTTCCGAGGCAAATCTCTCTCCGCCGCTTGTATTAATCACGTCCTCCTCCATTCGCCTTCATCTTCCTCGCTTCTCCCAACTCGAAAATTCCCAGTTTCTCTTTCAGTTTCAGCTACTCCGGTGATCTCTCAGCTCTCGATCGATCCCATCATGGGCGGCGGCGGCGGCGAGAATCGCGTCGACAACCACGACGACGACGACGACGACTGGGAGCTGGCCGCCGGCGCCGCGCTCGCCGACGTCACACTCGTTCTCGTCGGGAAGGTCGGCTCCGGGAAGAGCGCGACGGCGAACAGCATCCTTGGAGACGAAGCGTTCGAGTCCAAGTGTTCCTATGCCGGTGTCACGCAAACCTGCCAGAAGAAGAGCACCACGGTTCAGGATGGCTGCTTGATCCGCACTATCAACGTCATTGACACTCCAGGTAAGAAATAACAGTGCAAGATTACTGATGTTGCTATTTTGATGAGTAGTTTTAGGCTGAACCCCTAATATTGCATGATTAATTAAGTATTAACTATTTTTTAAAAAAATAATTAATATGATTTTTTAGAACAACTTTTGTATATAATTTTTTTTAAAGAAATACACAGTTTAATAGTTTGAAAAGTTACCCGCAGAGAATGATAGAGATGAGTTGGGATAACTAGGGGAAAGAACACAGCCTAAATTCATTCTCACTACAGCAGCATGGGCGTATACACTAATCAAGAAATTTATCTAATTAAGGTGCCGGAAGAATGAAATCCCATTTATCTGAAAAAGAAAAATATGTATTTGTTATATTTGCTTAGGTGCAGAGTTCTCTGCTTGTTATGTTGGTAATTGCCCTGCTTTAGTTTTGTGTATGGATAAATTAAGATCAGTGGCATATGGTTTAATTCTGAAGACCTGCTCGTGCTCTCTTGCTCGGATAGGTTTATTCGACATGGACATTAAAGCTGAGGATGTGCGTAGAGAGATCGTCAAGTGTATGGACATGGCCAAAGATGGGATACATGCGATGCTCATGGTTTTTTCAGCAACATCTCGCTTTTCCTGTGAAGATGAGAAGACGATCGAGACTCTGAAATCGTTCTTCGGCGATAAAATCCTTGACCATATGATATTGGTTTTCACACGCGGAGATGAAGTAGGTGGGGAGACCAGTTGGAAAAATATGTTATCTGACAGTGCCCCTACATATCTTCAGGTATACTTCACAATTGTCAAACTGTATCGCTTGTATTGTGTTTTGTATAGTTTGATTTGATGGTAATTTTATCATCCTTAATAATATACCGAGAGATGCCATATTTTCTAGTGTAAAACTAGCTGTCTAGGTAGCTATATGTATTTTCTTTTGATGAGTTCGATGTTTGGGTGCTTGACGGCTTGTGGGTTACATTTGACTATTTGAGCGTGATTTTGTTTACAGGACATTCTCAAGTTGTTTGAAAATAGGGTGGTTCTTTTCGAGAATAAGACCAGTAGTACTCAGGACCGCCAGGCGCAGCGGAAAAAAATGCTTGATGCAGTGGACTTTGTCGTATCAAGCAATCATGGGAAACCATTTTCAAATCAGCTGTTTACTCAGATTCAGGTGAGCTTCTATTAAATTACCATTGATATTTTAATTTCTCTTGTTTGATCTCGTTTCTTTGTTGCAGGAGGTGCATCACAGACAGAAAGATGCCAATTCTGAGGTGTATTCATCAATGCAAGAGACTGACAGTTACATTTCACTCATAACCAAGATGGTAAGGCATTTGTAATGCATATAATATAACAAGTTTTATAAATTCAGGAACATGTAGATGTGATTGTCCACCGAGAACAGAAGAACATTTTTTTAGTAACAGATAGCAATTTTGTGAACTTTGCATATCATTGGTTACGCTAGCTTACTACTCCCTCCAACTACTTTTGATAGTCATATTTTATTTTGACACACAGACCAAGGATAAATAATTTTACTTATCATTCATTTAAGCATGCTACTAGTCATTCCTCGTAAACAAGCGATTCATTAATATTTACATTTCTCAAAGCCCATGTAGCCAATCATGTGTGGAAGAATGGAGAGTCACGCATTAAATTCAAGAAAATCATTAAGATGATAGGTTGTTGGATTGAAATATGCCTATCAAAAACAAAATTTCCAGATTTGGAAATATGATTATCAAAAATAGATGGAGGGAGTACTACATAATACAGATACAGATCATATATTTAATTGGGACTTGGGAAAATATTAAGGGGGCAGTAAATATTATTGTGGGGTTCTATTAATTATAGCGCTATTTTTGTGCTTACGTAATACTCCCTCCATCCAAAAGTCTAAGACATATTTCTTCTCACTAAGATCAAGGAGTAATTAACTCATCCACCATGTGACAAAACAAATAAACTATACACAATCATGCAACCAATAAGTACAAAGAAGGTTTTCTTGGGTTCCGATCAACAATTTAATTTAGCACATAGAATCCACATATAAATCTTAGACTTTTGGAAAAAAAACCAAAAAATAAAATAGGTGTTAGCAGGGGCGGATCCAACGTGAGTGCAGGGGGGACTCGAGTCCCCCCACACCCACAAGACCCATGGATACCCCCCGGAGCACCCCCTTTATTTTTTTTCACCATGAATGATAAACTAAAGGTCCATAAATGTCTGGAGGTTGAAGAAACTGTGTAATTGAGCGCCCCCCCCCCCCCCCCCAAAAAAAAAAAAATTCCGCCACTGGGTGTTAGACTTTTGGATGGAGTACTAATTCAGTTATTATGAGCTACTATTTTTCTACGGAAAAACAACACGAGATTGTATCTTTTCATTGAATATAACTGTGGAGTTAAAAGAGGGTCAAACGGTTACTACGATTTTGAAAAAGCGGAGTCAAATGAGCAAACGTAAAAAAGTGAGGTCAGTTTAGTAGTTAGTCTTCAAAAGAGGGTCAAATAAGCAATTATCTCATTTTGTTATCAGCTACTATTATTCCTATTGATTAAATACCTGATCTGATTCTGCATATGATTCAATAGGTAGAAGAAAAGCTAAACGGTACAATCCTGAGGATGGAACAACAGCTTCTGAAAGAGCAGGAAGCGAGGCTGGATATACAGAACGAGATGACGAAGGCAATCCTAAGATCAGAAGAGGACATCAGGAGACTGAGGCTGAGCCTAGAGAAGGCTGAACAAGAGAGTAACAATGCTCGAGAGGAAAACAAGAGATTTAGAGAATCGGAGAAGGCTAGTAAAGAACAGGAGAAGCAAACAGAAGCTGAGATTCAGAAGCTTAAAGAGAAGATGGAGAAGGACAGAGAAGAAAGGGAGGAGGAGATTCGCAGGCTTAGAGATGATCTGGAGAAGGAGAGAGAAGAAAGGCAGAAACANAGCGGTTGCATCATTCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016465