BGIOSGA016544

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Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016544| Description = Japonica Group Os04g0460400 (Os04g0460400) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA016544, complete gene....")
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Gene Name

BGIOSGA016544

Description

Japonica Group Os04g0460400 (Os04g0460400) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA016544, complete gene.

LocusTag

NM_001059525.2

Ensembl Transcript ID

BGIOSGA016544-TA

Ensembl Protein ID

BGIOSGA016544-PA

Length

800

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21150694..21151493

Sequence Coding Region

21150694..21150911,21151043..21151166,21151275..21151493

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21150694..21151493 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21150694..21151493 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCACGGGGAGATCAGCTCGAAGGCGCCCCTGGTGGCGCCGGTGGCGGCCGGCGTGAACCGCGCCGTCGCGGTGGTGGACACATTCCTCCGGTTCATCGCCATCATCGGCACGATCGGCAGCGCCATCGCCATGGGCACCACCAACGAGACGCTCCCCTTCTTCACGCAGTTCATCCAGTTCGAGGCCAAGTACAGCGACCTCCCGTCCTTCACGTTCTTCGTGGCGGCGAACGCGGTGGTGTGCACGTACCTGGTGCTGTCCATCCCGCTGTCCATCGTGCACATCCTCAGGCCCAGGGCGCGGTACAGCCGGCTGTTCCTCGTCTTCTTCGACACGGCGATGCTGGCTCTGCTGACGGCGGGCGCGTCGGCGGCGGCGGCGATCGTGTACCTGGCGCACAAGGGCAACGTGCGGGCAAACTGGTTCTCCATCTGCCAGCAGTTCGACTCCTTCTGCGAGCGCATCTCCGGCTCGCTCATCGGCTCCTTCGCCGCCATGGTCCTGCTCGTCGTCCTCATCACCCTCTCCGCGTTCGCGCTCGCAAGGCGCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MEHGEISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNETLPFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRPRARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIGSFAAMVLLVVLITLSAFALARRH</aaseq>

Gene Sequence

<dnaseqindica>1..218#350..473#582..800#ATGGAGCACGGGGAGATCAGCTCGAAGGCGCCCCTGGTGGCGCCGGTGGCGGCCGGCGTGAACCGCGCCGTCGCGGTGGTGGACACATTCCTCCGGTTCATCGCCATCATCGGCACGATCGGCAGCGCCATCGCCATGGGCACCACCAACGAGACGCTCCCCTTCTTCACGCAGTTCATCCAGTTCGAGGCCAAGTACAGCGACCTCCCGTCCTTCACGTAAGCCATCGATCCGCTATACACATGATGCCACTCACAGCTCAGGGTCAATAGTATCTGTGTTCTGCTGCAAGGCGCAGGAAGTTTGATGCAGCTAGTTCGATTTTTTGCATGCACGGCCGGACGGACAGGTTCTTCGTGGCGGCGAACGCGGTGGTGTGCACGTACCTGGTGCTGTCCATCCCGCTGTCCATCGTGCACATCCTCAGGCCCAGGGCGCGGTACAGCCGGCTGTTCCTCGTCTTCTTCGACACGGTGAGGAAATAACGACATATATCGACGCTGACTACATGTTTGTTGCTAGAAATTGCTCTTGTTCGTGATGGATATACGTATGTGTGATGTGCATATATATATGCACAGGCGATGCTGGCTCTGCTGACGGCGGGCGCGTCGGCGGCGGCGGCGATCGTGTACCTGGCGCACAAGGGCAACGTGCGGGCAAACTGGTTCTCCATCTGCCAGCAGTTCGACTCCTTCTGCGAGCGCATCTCCGGCTCGCTCATCGGCTCCTTCGCCGCCATGGTCCTGCTCGTCGTCCTCATCACCCTCTCCGCGTTCGCGCTCGCAAGGCGCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016544