BGIOSGA016635

From RiceWiki
Revision as of 16:09, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016635

Description

OJ000223_09.13 proteinOs04g0486400 proteinPutative

Definition

Oryza sativa Indica Group BGIOSGA016635, complete gene.

LocusTag

OJ000223_09.13

Ensembl Transcript ID

BGIOSGA016635-TA

Ensembl Protein ID

BGIOSGA016635-PA

Length

4037

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22723473..22727509

Sequence Coding Region

22723473..22724028,22724998..22725036,22725613..22725741,22726199..22726426,22727304..22727509

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22723473..22727509 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22723473..22727509 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCTCTCCGGGCCGTCGCCGCAGCAGCCCACCCCGCCGCTGCTCCTCCCGGAGAGCAGCGGCGAGGACGGCGGCCACGACTCCTCCTCCCGCGCGGCGGCGTCGGGCGGCGGCGGCGGCCCCAAGAAGCGCGCGGAGACGTGGGTCCAGGACGAGACCCTCTGCCTCATCGCGCTGCGCCGGGAGATGGACTCCCACTTCAACACCTCCAAGTCCAACAAGCACCTCTGGGAGGCCATCTCGGCCAGGATGCGGGAGCAAGGGTTCGACCGCTCCCCGACCATGTGCACCGACAAGTGGAGGAACCTCCTCAAGGAGTTCAAGAAGGCGCGCAGCCACGCGCGGGGCGGGGGCGGTGGTGGCGTGGGCGGCGGCGGTGCGGGCACCGGCGGCGGGAATTGCCCCGCCAAGATGGCGTGCTACAAGGAGATCGACGACCTGCTCAAGCGCCGCGGGAAGCCGACGGGCGGTGGCGGCGCCGCCGTGGGGAGTGGCGCCGTCAAGAGCCCCACGGTCACCTCCAAGATCGACTCCTACCTGCAGTTCGACAAGGGTTTTGAAGATGCTAGCATTCCGTTCGGCCCTGTTGAAGCAAGTGGTAGATCATTGCTAAGTGTCGAAGATCGACTAGAACCTGATAGTCATCCACTTGCATTAACAGCTGATGCAGTTGCAACCAATGGTGTAAATCCATGGAACTGGAGAGACACCTCTACCAATGGTGGAGATAATCAGGTTACTTTTGGTGGGAGAGTCATTTTAGTCAAGTGGGGTGATTACACTAAAAGAATAGGCATTGATGGTACTGCAGACGCAATTAAAGAAGCCATCAAATCGGCATTTGGTCTAAGAACAAGACGGGCCTTTTGGCTTGAAGATGAGGATGAGGTTGTCCGTTCCTTAGACAGGGATATGCCGGTTGGAACATACACCCTTCATCTCGATACCGGAATGACCATCAAACTATATATGTTCGAAAATGATGAGGTCCGGACAGAAGACAAGACATTCTACACTGAAGAGGACTTCCGAGACTTTCTCTCGCGGCGTGGTTGGACACTCCTCAGGGAGTATTCAGGCTACAGAATCGCCGATACTCTGGATGACCTTCGTCCTGGTGTGATTTATGAAGGGATGCGATCACTTGGTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MLLSGPSPQQPTPPLLLPESSGEDGGHDSSSRAAASGGGGGPKKRAETWVQDETLCLIALRREMDSHFNTSKSNKHLWEAISARMREQGFDRSPTMCTDKWRNLLKEFKKARSHARGGGGGGVGGGGAGTGGGNCPAKMACYKEIDDLLKRRGKPTGGGGAAVGSGAVKSPTVTSKIDSYLQFDKGFEDASIPFGPVEASGRSLLSVEDRLEPDSHPLALTADAVATNGVNPWNWRDTSTNGGDNQVTFGGRVILVKWGDYTKRIGIDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPVGTYTLHLDTGMTIKLYMFENDEVRTEDKTFYTEEDFRDFLSRRGWTLLREYSGYRIADTLDDLRPGVIYEGMRSLGD</aaseq>

Gene Sequence

<dnaseqindica>1..556#1526..1564#2141..2269#2727..2954#3832..4037#ATGCTCCTCTCCGGGCCGTCGCCGCAGCAGCCCACCCCGCCGCTGCTCCTCCCGGAGAGCAGCGGCGAGGACGGCGGCCACGACTCCTCCTCCCGCGCGGCGGCGTCGGGCGGCGGCGGCGGCCCCAAGAAGCGCGCGGAGACGTGGGTCCAGGACGAGACCCTCTGCCTCATCGCGCTGCGCCGGGAGATGGACTCCCACTTCAACACCTCCAAGTCCAACAAGCACCTCTGGGAGGCCATCTCGGCCAGGATGCGGGAGCAAGGGTTCGACCGCTCCCCGACCATGTGCACCGACAAGTGGAGGAACCTCCTCAAGGAGTTCAAGAAGGCGCGCAGCCACGCGCGGGGCGGGGGCGGTGGTGGCGTGGGCGGCGGCGGTGCGGGCACCGGCGGCGGGAATTGCCCCGCCAAGATGGCGTGCTACAAGGAGATCGACGACCTGCTCAAGCGCCGCGGGAAGCCGACGGGCGGTGGCGGCGCCGCCGTGGGGAGTGGCGCCGTCAAGAGCCCCACGGTCACCTCCAAGATCGACTCCTACCTGCAGTTCGACAAGGGTATACCTCTTCCAGAGTTTACAGTCTTCTGATTAAAATGAGCATGCCTTGCATTGATGGATCGAAGAGAGGCACTTCGAACTACTTGCATTGTCTGAAGAGCATGGGACAGCTTACAACTTTGGTATTTGTTCAATCTCTTGATGCACAACTCATAACTCAGCACAGAGCCACAGACTAACTGCAAATAGAACCCTAAACTTAGGCACTTAGCAATCAGAATTGAGTTTTCTTTACACCATGTAGCTCAGTAAGCTTGAACAGATGAACTAACAGCTGTAATAATTTTTTCAGGTAATATGAATAATAAATCTCCAGCCTGTATTCGTAGTGCATCCAGCCAAAAACCAGAAAAATAGAAGAGTTGTTGGACAAACCCCAACATGCTTGAACTGAAGCAGAACAGTAGAAAAAGTCTAGAATAAGACTCTAAACTGGACTAACAGTTATACTAATGTATGTCACTAGTCACTAGTCAGCCAATGAACTACGCAGAAAGTAATTATGCTATGCTGTGTACTTCTGACAGCTTATTAGCTAGTAATTCGCGTTGAGGGGATAAATAAATTGTCACTATAAAACTATATCCGCATCGTAGTAAACCTAAATAGCCCCTCCATGACTCTACCGGTTGTACCAGTATTATCACCACCAGTAGAAATGATCTCAACAATTGATTTATGAGTTATATCAGTAGTTGAGGTGGTAGTATAAATTGATATGATCCATTGTATTAGAAAAGATGAATGGTTTAGATTGATTCTACTTAAAGCAGAGATCATTGTAAAGTGTGCGGGCATGATTTTCACAATTGAGGGATGTAAAATAAACAGTATTGAAGTTAGGGTGGAAAAATGAAAATTAAACATAAGCAATATTTTCAGTCTTCATGCTTATACTTGCCTTCTACAGTTCTGCTTGTTTAATTCGGTTGTTTTCTCATTGACTAATATTATGACCCTTGTCTAGGTTTTGAAGATGCTAGCATTCCGTTCGGCCCTGTTGAAGGTACCAAAATGTCCACATGCAATAATTTCAGATATGCCATAGTCGTTTACTTGCTTGGCTAAGTTGTTTTGACATAGTAAATTTGATGCAAAGTCATTTGCGGACTAGTCATTTTCCCTTTTTATGGTTGACCATCCAAAAAAGTGCTCCAAAACAGTGAGTTTTTAGTGATGCCATTTTTCTTAGTGTCATAGAAGAGCTTTCAGTCCTAGCTCATTAATTTTTCTGATGGCGTATGATTTATTGTTCTCAAAATTTTGGATGAACCTAACATTTAATTTGAATTGCTCGATGTTGTTGTGGAATTGTTGAAATTCTCGCTTTCTCATATGAAGTTACAATCAAGGAGAAAAAGGCACCTGTTACTAGCACTTATAATTAGTTGTTTGACCAGTAACACCAATAAAGTATAATTTCATTTTTACCATTTTTATTATCAGATTCATGTGTTTTGTTTATCCAACTCCTGTTATCAATGATACTCTGATGTAACTGTGGTTATGAAGACAGAACCATGCATATCAGTGCATCATATATAGTTTTACTCTGATTCTTTTGCTCTTTTCTGTTTTACAGCAAGTGGTAGATCATTGCTAAGTGTCGAAGATCGACTAGAACCTGATAGTCATCCACTTGCATTAACAGCTGATGCAGTTGCAACCAATGGTGTAAATCCATGGAACTGGAGAGACACCTCTACCAATGGTACTAATCCAAATCCAAACACACTAAAAGTGATAATAATAATCTGGATATTTATGGCAGAGGAATTGGACTGGTTGGAAATATTGCTGCTTGACTGTGTACTTATGAACTTGATTCAACTTCCATTGGATAATATTTATTTTGATTGCATGAACTTCCTGTTCTGCTGAGAAATATTATTTCAAAATATTTCATAAACCACTGAATTTAACTATTTAGTCATATCTGTCATTCCTGAAATATGGATGAGCTATTGGATACTTTTTTCTTTCTAACTGTTATTGTTTCAATTTGTTTCTACGCATACGGCTAATATACACCATATACTTTATTTTTACTAATGAAGCTATAAGTTATTAATTTCAGATGGTACTAAAACTCTATAATTCTTATGTTAATTAATTCGTGGCTCCTTGTTTTAATATTCTGTATTAATCGGGAAACGTGCCTCATACAGGTGGAGATAATCAGGTTACTTTTGGTGGGAGAGTCATTTTAGTCAAGTGGGGTGATTACACTAAAAGAATAGGCATTGATGGTACTGCAGACGCAATTAAAGAAGCCATCAAATCGGCATTTGGTCTAAGAACAAGACGGGCCTTTTGGCTTGAAGATGAGGATGAGGTTGTCCGTTCCTTAGACAGGGATATGCCGGTTGGAACATACACCCTTCATCTCGATACCGGTAATCGGAAAACGTTTTCTCTGCTTATGGACAAGACTTTGTTTTCTCCACAACTAGGAATACCGTAGTAGATTATTTAGATTTGTAACAGTATTTTCTGTATTGTGGTGTTGTTGTTGTTGTTGTGTGTGGTGGGGGGATTATTTTGGAACATATGGCTTTTCAGTTTGTGACTTGGTTGGTGCAGTAGACCCTAACTAAGAACTGAAAGCAAGTGGCACCACACAGAAGATTTGCATCCATTAACTTTAAATGTGAATGCCGATTTCTTGTTTGAGATTCTTCTTGTTGAGCTAACTAGTTCATGTTGGTCATCTGTACATCTAACTAGAAAGTATGGTGCTAACTAGAAATTTCTTTTGGGGGTATTTGTATACTAGTGATGTTTGTCAGTATTTATGTTTGGATGCTGCCAATAGTGAATGACACTCTCATTACCAACAAACTGTAAAAAATATCATGTTTTATCAGTTGTAATTTACGTCTCAATTTACGATGCTATTTTGCGTCCAAGTTGCGCATTGCCAACTAAAAGATTTAGTTTTTTTTCTGAAGTTTTTTTTTTCAAACTCTACTGAAGGATGTTCATCAACACTGCTCCCTTTTGTTCCAAATATAGATTACTTTAGACTTCTCAACAATTTCCTTAGTAAGTCATTTAGGAACTTCTAAGCACTTATTCAAAAAAAATTCCTCCATGATTGTCCTTCCAAAATAGATGCTCCTTCTCTCATAAAGAAATGATACATATTTTCCAATGTAATATAAATGAAGGCCAACAAGGTCAATTTGAGTTAGTGCACAGATCTAAAACAACTTATTTTGGAATCAGATAGAGTTATATTGATTCAATCATTGCTGCATTCAATGTTCACAGGAATGACCATCAAACTATATATGTTCGAAAATGATGAGGTCCGGACAGAAGACAAGACATTCTACACTGAAGAGGACTTCCGAGACTTTCTCTCGCGGCGTGGTTGGACACTCCTCAGGGAGTATTCAGGCTACAGAATCGCCGATACTCTGGATGACCTTCGTCCTGGTGTGATTTATGAAGGGATGCGATCACTTGGTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016635