Os09g0476100

From RiceWiki
Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0476100| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001069998.1 GI:115479738 Gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0476100

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001069998.1 GI:115479738 GeneID:4347363

Length

2369 bp

Definition

Oryza sativa Japonica Group Os09g0476100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18896660..18899028

Sequence Coding Region

18897147..18898961

Expression

GEO Profiles:Os09g0476100

Genome Context

<gbrowseImage1> name=NC_008402:18896660..18899028 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18896660..18899028 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccgacggcgacggctcgttccaccgcaacgaggccatctccgccgtccaggacgtcgaccagtactatggcgacgacgacgactacgacgacctctacaacgacgtcaacgtcggggacggcttcctccagtcgtctcacccgccgccccagcccccgcccccgccgcagcagcagcagcagccgccgccgatttcgcagcagccgcctccgttgcaggcgccaccgccgccgccgcagcagcaacagcagcagcagcagctgcaggcgcccccttcgctcccgccgccgcctccgcagcggcagccggagaaggtgcacatcccgggcgtcgcggctgtcccccccgcccccgttcccgaccggcccaacccggtccacctcccgccgcagccgcagccaccggtggccgccgcgcctccgccgcctccgcataaccagatccagccgggaggaggcgacggcttccaccgccagggtgggggaaactacggtgggggcccgattgtggtcggcaacggcgggggtggtgatggccccggtggtacgaccctcttcgtaggggagctccactggtggaccacggacgccgatctagaggcagagctaagcaagtacgggcaggtcaaggaggtgagattcttcgacgagaaggcgagcggcaagtccaagggatactgccaggttgatttctatgaccctggcgctgctgcctcttgcaaagagggcatgaacggccacttgttcaatggacgcccctgtgtcgtggccttcgcctcgcctcacaccgtgcgccgcatgggtgaagctcaggtgaagaaccaacaatcgatggctcagcaaaactcgggtgtgcagaagggtggtagaggtggtggtgcagctggaggtccgggtggagctcaggtgggtgggaattatggtggtggtcgtggaggcggaggaggtggaccgggtggtggcggaggtggaggcggcggtggaaattggggaaggggtggcgggggtatggggggtagaggccaagctgggaatatgaggaatcggatgggtccggttggtggacgtggattaatggggaacggagggatggtagctccaccaccacctatgcttcatcctggaggcatgttagggcagggttttgatccaactggctatggtgcagcaatggggaggatgggtggtgggtttggtggcttccctggaggacctggggctgctccattcccaggcttaatgcagccattcccacctgttgttgcacctcatgtaaacccagcgttctttggaagaggaggtggtatgggtgctggtggggtcgggatgtggccagacccgagcatgggtggttggggtggggaagagcaatcaagctatggcgacgatgcagcatcagatcaacaatatggtgaaggtgggagccatggtaaggagaggccaccagagagggaatggtcaggggcatctgataggaggcgggagagggagaaagatttgcctcctccaccagactggccagagaggaggcaccgtgatgaacgggacgcaggtcgggagagggagagggagagagacagggacagggaaagggaaagagaccgagacagggaacgggaaagggaaagagatcgagacagggagagggaacggtaccgggatgatagagatcgccatggcgattatcataggcacgggaagcgtgagtcggatcgtaatgaagactgggataggggaagatcatctgggaggcgtagcagatcaagggaggttgaccactcaaagcggcggcggatgtcgcctgagtaa</cdnaseq>

Protein Sequence

<aaseq>MDPDGDGSFHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGF LQSSHPPPQPPPPPQQQQQPPPISQQPPPLQAPPPPPQQQQQQQQLQAPPSLPPPPPQ RQPEKVHIPGVAAVPPAPVPDRPNPVHLPPQPQPPVAAAPPPPPHNQIQPGGGDGFHR QGGGNYGGGPIVVGNGGGGDGPGGTTLFVGELHWWTTDADLEAELSKYGQVKEVRFFD EKASGKSKGYCQVDFYDPGAAASCKEGMNGHLFNGRPCVVAFASPHTVRRMGEAQVKN QQSMAQQNSGVQKGGRGGGAAGGPGGAQVGGNYGGGRGGGGGGPGGGGGGGGGGNWGR GGGGMGGRGQAGNMRNRMGPVGGRGLMGNGGMVAPPPPMLHPGGMLGQGFDPTGYGAA MGRMGGGFGGFPGGPGAAPFPGLMQPFPPVVAPHVNPAFFGRGGGMGAGGVGMWPDPS MGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWSGASDRRREREKDLPPPPDW PERRHRDERDAGRERERERDRDRERERDRDRERERERDRDRERERYRDDRDRHGDYHR HGKRESDRNEDWDRGRSSGRRSRSREVDHSKRRRMSPE</aaseq>

Gene Sequence

<dnaseqindica>68..1882#gcgctctctcccctctcttctagatccagccctcccctcctagggtttggctccgccgcccgccgccatggatcccgacggcgacggctcgttccaccgcaacgaggccatctccgccgtccaggacgtcgaccagtactatggcgacgacgacgactacgacgacctctacaacgacgtcaacgtcggggacggcttcctccagtcgtctcacccgccgccccagcccccgcccccgccgcagcagcagcagcagccgccgccgatttcgcagcagccgcctccgttgcaggcgccaccgccgccgccgcagcagcaacagcagcagcagcagctgcaggcgcccccttcgctcccgccgccgcctccgcagcggcagccggagaaggtgcacatcccgggcgtcgcggctgtcccccccgcccccgttcccgaccggcccaacccggtccacctcccgccgcagccgcagccaccggtggccgccgcgcctccgccgcctccgcataaccagatccagccgggaggaggcgacggcttccaccgccagggtgggggaaactacggtgggggcccgattgtggtcggcaacggcgggggtggtgatggccccggtggtacgaccctcttcgtaggggagctccactggtggaccacggacgccgatctagaggcagagctaagcaagtacgggcaggtcaaggaggtgagattcttcgacgagaaggcgagcggcaagtccaagggatactgccaggttgatttctatgaccctggcgctgctgcctcttgcaaagagggcatgaacggccacttgttcaatggacgcccctgtgtcgtggccttcgcctcgcctcacaccgtgcgccgcatgggtgaagctcaggtgaagaaccaacaatcgatggctcagcaaaactcgggtgtgcagaagggtggtagaggtggtggtgcagctggaggtccgggtggagctcaggtgggtgggaattatggtggtggtcgtggaggcggaggaggtggaccgggtggtggcggaggtggaggcggcggtggaaattggggaaggggtggcgggggtatggggggtagaggccaagctgggaatatgaggaatcggatgggtccggttggtggacgtggattaatggggaacggagggatggtagctccaccaccacctatgcttcatcctggaggcatgttagggcagggttttgatccaactggctatggtgcagcaatggggaggatgggtggtgggtttggtggcttccctggaggacctggggctgctccattcccaggcttaatgcagccattcccacctgttgttgcacctcatgtaaacccagcgttctttggaagaggaggtggtatgggtgctggtggggtcgggatgtggccagacccgagcatgggtggttggggtggggaagagcaatcaagctatggcgacgatgcagcatcagatcaacaatatggtgaaggtgggagccatggtaaggagaggccaccagagagggaatggtcaggggcatctgataggaggcgggagagggagaaagatttgcctcctccaccagactggccagagaggaggcaccgtgatgaacgggacgcaggtcgggagagggagagggagagagacagggacagggaaagggaaagagaccgagacagggaacgggaaagggaaagagatcgagacagggagagggaacggtaccgggatgatagagatcgccatggcgattatcataggcacgggaagcgtgagtcggatcgtaatgaagactgggataggggaagatcatctgggaggcgtagcagatcaagggaggttgaccactcaaagcggcggcggatgtcgcctgagtaatgtatctggatgggctatgtttagtgtaggggtatcggcaattcgcggcggcatcttttttgcacatgccttttggttagcgaatcagcttgcaactgtcaactgtttactgcttataacatcggtggattttacctgcttgtctccaaggatctgttgtagcattaattgagatgtaagttcttaatctgttctccttttttatgtaaatattctttttttttgtcgttgtatacctgtatataatttcttgttggatactagtgtatagcatcatattcatgtaacctcatcatgtataccagtttttgttgtgtatagttattcttttttccatttattcttttgtagcataaaggaattgctcaagccgagaatgtaattagttttgtatgcttaacatgtaactatagcgctgtaggaagcaaacctttttgtaatccatttgctgattatatgtattctcaaacaaaaatgtaaaggttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0476100, RefSeq:Os09g0476100