Os07g0603300

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0603300| Description = Conserved hypothetical protein| Version = NM_001066747.1 GI:115473226 GeneID:4343837| Length = 4994 bp| Definition ...")
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Gene Name

Os07g0603300

Description

Conserved hypothetical protein

Version

NM_001066747.1 GI:115473226 GeneID:4343837

Length

4994 bp

Definition

Oryza sativa Japonica Group Os07g0603300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25324485..25329478

Sequence Coding Region

25324599..25325374,25325960..25326077,25326178..25327857,25327990..25328057,25329107..25329287

Expression

GEO Profiles:Os07g0603300

Genome Context

<gbrowseImage1> name=NC_008400:25324485..25329478 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25324485..25329478 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctccggcgagggtgctcggcggcggtggtggaggaggggggttgggggacgaggcgccggagctggagaggcagatggggtgcatggccggcatcttccagatcttcgaccgccgccagcgcctgctcaccgcgcgccgccgccgcccgccgcccaagatgctgcccccgggcccaggccatactcttccaagaagcagcagcaatgttgcagcgcagagctcaagtacctccaagatcgttctggagaaaacattcagcaagagcatgaccgagaacagtagcctttcaatagagtcatcaagggcttcctgttcttcctcctcatgctcatccttttcatcacttgatggcaacaaatcgatccaacaagagctgccatacatcaacgagcagctctttgtacagaggccactgaagagctcaccaagtctgaaggacccagtcatggacaccaggtctggacagtcaaacattggcttcagagacattgtgaaggactccattaaccgggacaccggaggccttactgtcaagacctcggtgaaggatgcaaggaggaatgggcagtacaaagactcaccaaggcccttgctgctctccaaatcaatggatgggacctacgtcatcgggatcgataggagcaccaaggtccctgctaatgctgttgaatccagcaggcgattcccagagcagtcgcgcttctcatgcgatgatcggcggctcctgaggccagttgaagctcaagagaacaagaagccttccacaaggctcaaagagcttcccagactgtccttggacagtaggaaagaaaccctgagctcgagttctcgccagaagaccttcagttacaggagaaccgacgacagtctcatggacgctcttaggcctcaagattccccaggccataggcgtgccagcagtgtcattgccaagctgatggggttggaagaagcacccaatgctacaggggtgctaactgttgatagctacgagcctgaaagatcaccaagaccagcagaagacacacagaaggagcatccagtaccttcccctagaagattttgtcaggatccacgcgagtcgctgccaaaagatgagtctccggcaatgaaaaccaagccttctccaagaattcttactgaatctgctccttggaggcagcaggagaagattgccaccagtagcaaggcttcacaatgccgagatgctgaagttcgaccaaggactgcatctctctatgcctacattgagagaaggggcggggggcttgagttcttggagtgcaacaaggacttcagggctctcaggatactggaagcgctgcacgcaaaggatgccaagcgccagaacgatggcaatggcgcattaacagtggctgctcagcaggcaggggatgcactgaacaccagttccagacacttccagcctcccattgtagtcatgaagccagcaagaagcactgagaagcagccaggggtttcacttgcttcagttgatccccttgcagggttcagaaacctcaggaagctgcaggccagagatgcgccttgcattggcgagcatgagaccagcacaaatgagaaggtccattctcgcatttcaagggcacaatccaagtccgatgaacctgctagccgtgcaagctctccaaggcctacaggatcatcaagccccaggacagtgcagcggaaggcagagtcagaaaggaggtctcgtccacctgtctcaccgaagtccccaagcaagaagtccagtgaagcagcctctcctggaggaagaacaagaacaaagccttctcaagggaagaaccaccgtgacaatgaggtctcgaagagtccaagaagcagaatcagcatggtgaaggagatcgacataagcatcatggattttcaaaagcccctagcatcgacaccaagtcacaagggaactccttcagttcttgcttcagatcagaagattaattcactggagaatgccccaagtcccatctctgtcctcgacacgtcatattaccatacaagactgtcatattcattcaaagatggggagacacattcttcagaggagtgctggaacccgaacagcctgcctgacacgccacagtccaagacgagcagtgaagtcagccagatcaaaccagaaaattttgaggccctcatccagaagcttgagcaattgcagtcaatgaatgatgaagttgcaaacaagaaagatcatcagtacatttacgagatactcttagcatctggcctcctgcacaaagaacttagcttcgtagccatgcctggtcaagcatggccatcaagctgcctgatcaatccagagctcttcctcattcttgaacaaacaaagccagattttgcttcagcagaccaaactgttaccaagagctccaaagctaacacagaaaagcttcatcgaagaattgtattcgatctggtaaacgaaattacagctcagaagatgaacattcattgctcggcaagtcagtcagccaagtcgcttcaattaaggaagtacaacggatggcgactttttaaggacctgtgcacagaggttgacaggcttcaatctgagagttcagcgataaaatgctctgaagaggatggggatgaaagaatgctattggttgaggatccactgaatggaatagaagattggagcttcgatagtgaatcgccaagcacggttttggagatcgaaagattaatctacaaggacctcattgacgaggtcatatgggatgaggccacagggaagatgcaaggtggacagtggaacctaaagaggcagctgtcatttagtagtacaagctga</cdnaseq>

Protein Sequence

<aaseq>MPPARVLGGGGGGGGLGDEAPELERQMGCMAGIFQIFDRRQRLL TARRRRPPPKMLPPGPGHTLPRSSSNVAAQSSSTSKIVLEKTFSKSMTENSSLSIESS RASCSSSSCSSFSSLDGNKSIQQELPYINEQLFVQRPLKSSPSLKDPVMDTRSGQSNI GFRDIVKDSINRDTGGLTVKTSVKDARRNGQYKDSPRPLLLSKSMDGTYVIGIDRSTK VPANAVESSRRFPEQSRFSCDDRRLLRPVEAQENKKPSTRLKELPRLSLDSRKETLSS SSRQKTFSYRRTDDSLMDALRPQDSPGHRRASSVIAKLMGLEEAPNATGVLTVDSYEP ERSPRPAEDTQKEHPVPSPRRFCQDPRESLPKDESPAMKTKPSPRILTESAPWRQQEK IATSSKASQCRDAEVRPRTASLYAYIERRGGGLEFLECNKDFRALRILEALHAKDAKR QNDGNGALTVAAQQAGDALNTSSRHFQPPIVVMKPARSTEKQPGVSLASVDPLAGFRN LRKLQARDAPCIGEHETSTNEKVHSRISRAQSKSDEPASRASSPRPTGSSSPRTVQRK AESERRSRPPVSPKSPSKKSSEAASPGGRTRTKPSQGKNHRDNEVSKSPRSRISMVKE IDISIMDFQKPLASTPSHKGTPSVLASDQKINSLENAPSPISVLDTSYYHTRLSYSFK DGETHSSEECWNPNSLPDTPQSKTSSEVSQIKPENFEALIQKLEQLQSMNDEVANKKD HQYIYEILLASGLLHKELSFVAMPGQAWPSSCLINPELFLILEQTKPDFASADQTVTK SSKANTEKLHRRIVFDLVNEITAQKMNIHCSASQSAKSLQLRKYNGWRLFKDLCTEVD RLQSESSAIKCSEEDGDERMLLVEDPLNGIEDWSFDSESPSTVLEIERLIYKDLIDEV IWDEATGKMQGGQWNLKRQLSFSSTS</aaseq>

Gene Sequence

<dnaseqindica>4105..4880#3402..3519#1622..3301#1422..1489#192..372#ctgcatggcattcgcacgccattgacacatatctcatcataccatcaccataccacatctcatctcacgcgtcccaaagaaagtgatagtgtacgtacctctgcttgctccttggctttctgagctgagctgctctgcagttggatgtgcgtgagctggtgatctgggaggagtcggagtcggaggaggagatgcctccggcgagggtgctcggcggcggtggtggaggaggggggttgggggacgaggcgccggagctggagaggcagatggggtgcatggccggcatcttccagatcttcgaccgccgccagcgcctgctcaccgcgcgccgccgccgcccgccgcccaagatgctgcccccgggcccaggttaacggcgcatttttttttctctgcacatttcttcctgtggcatctgctcctcttcccctgttctgttttcacaatcaccagcttcactccattcacacacccaagatcatgtcagctgcgtctcaagcatttttacaagctgtttctcttttcttttccctctctatcttggttactgtttttaagtattactactactgttttactgtttttaagccatctgtttttaagtgttactttctgaattattagctgcaactcgttctgcaaatgttgaccagagattagaaaagttgggtgcttcttttgtgggacagagaactactaatttcatgtgttggttgaaactcgagagacaagtcctttcagactattattcaaagtttggtaacagataacagttggaaggtgcagtagaacatgcattggttggttttttttaaaaaatgctattaattggaaaatgggagttttcttcacttcttcacaactgcaggatactaatttcatctttaaccttcttttattgaaaacagagtacccccctcaccctagataaaagacaacagtacaaaaaaacagatggcttacagtagttgtgatcataaaggcctttctttaaagaatgtaatatggcagcacacattgacataaggacaggcactgacgtggatttgggtgcccagaagtagcatgaggggataacttttcgcactgactgaaaaggacagattatcagttagttactaaaattttcattaatataatgaaactgaagaggacagcttaacatttggttttaaaatttccattctcgtcaatgataaattaactgaagaagacagcttaacaattgattataaaacttccattcatgtatatgattaattgattatattattgaacaacaattaagaaaacacacaccttttcaccgctcaaatccatccattttgctcataccagactgtcttaataaatagctataattcctcaattcacagtttaggctgtaattataatgtcttcttttttttcttttctaggccatactcttccaagaagcagcagcaatgttgcagcgcagagctcaagtacctccaagatcgttctggtaattttcctattcgaactccaactgttgtttgttaccacttgccagtaaaaaaaccatcccatgcatgcatcagaagtatactttggccacatcaagaagagtactctaacttatggattgcctttgcaggagaaaacattcagcaagagcatgaccgagaacagtagcctttcaatagagtcatcaagggcttcctgttcttcctcctcatgctcatccttttcatcacttgatggcaacaaatcgatccaacaagagctgccatacatcaacgagcagctctttgtacagaggccactgaagagctcaccaagtctgaaggacccagtcatggacaccaggtctggacagtcaaacattggcttcagagacattgtgaaggactccattaaccgggacaccggaggccttactgtcaagacctcggtgaaggatgcaaggaggaatgggcagtacaaagactcaccaaggcccttgctgctctccaaatcaatggatgggacctacgtcatcgggatcgataggagcaccaaggtccctgctaatgctgttgaatccagcaggcgattcccagagcagtcgcgcttctcatgcgatgatcggcggctcctgaggccagttgaagctcaagagaacaagaagccttccacaaggctcaaagagcttcccagactgtccttggacagtaggaaagaaaccctgagctcgagttctcgccagaagaccttcagttacaggagaaccgacgacagtctcatggacgctcttaggcctcaagattccccaggccataggcgtgccagcagtgtcattgccaagctgatggggttggaagaagcacccaatgctacaggggtgctaactgttgatagctacgagcctgaaagatcaccaagaccagcagaagacacacagaaggagcatccagtaccttcccctagaagattttgtcaggatccacgcgagtcgctgccaaaagatgagtctccggcaatgaaaaccaagccttctccaagaattcttactgaatctgctccttggaggcagcaggagaagattgccaccagtagcaaggcttcacaatgccgagatgctgaagttcgaccaaggactgcatctctctatgcctacattgagagaaggggcggggggcttgagttcttggagtgcaacaaggacttcagggctctcaggatactggaagcgctgcacgcaaaggatgccaagcgccagaacgatggcaatggcgcattaacagtggctgctcagcaggcaggggatgcactgaacaccagttccagacacttccagcctcccattgtagtcatgaagccagcaagaagcactgagaagcagccaggggtttcacttgcttcagttgatccccttgcagggttcagaaacctcaggaagctgcaggccagagatgcgccttgcattggcgagcatgagaccagcacaaatgagaaggtccattctcgcatttcaagggcacaatccaagtccgatgaacctgctagccgtgcaagctctccaaggcctacaggatcatcaagccccaggacagtgcagcggaaggcagagtcagaaaggaggtctcgtccacctgtctcaccgaagtccccaagcaagaagtccagtgaagcagcctctcctggaggaagaacaagaacaaagccttctcaagggaagaaccaccgtgacaatgaggtctcgaagagtccaagaagcagaatcagcatggtgaaggagatcgacataagcatcatggattttcaaaagcccctagcatcgacaccaagtcacaaggtatacataataaaatcagatataaggaaaccagccagttcaatcaatgttttttaccttgtacatcactaattagtaaatatgttctccttttttacagggaactccttcagttcttgcttcagatcagaagattaattcactggagaatgccccaagtcccatctctgtcctcgacacgtcatattaccatacaagactgtcatattcattcaaaggtgagaagttgatacagtattttttctgcattaagataaccaactgcaagaacagcaacatgatggattctactgtttgctctcattcaatccagaagcccatagtgtcattcaaaggacaagcatagttagctgtaagcgtgccaatgacgctagtgacagataatctgcaataaaagctacaaccaggtagcttgtggtcctgatatggggaggaaccacagcagatggactgttgcagagttgcagctagatgaccagaacattgttaggttatagcaaggcccacatgttgcacttgcttatgcaggacagcaggagcatgatgtgtgtcttctggtgtatatgcattgctagtatagacgtgcccaccaatgtccccctctacaaatacacctagcatgagtatgattcagttgatccgtagacagatagtgatatcagatctcctgtccagtacatgtttttctgcagttgttaggtctgataatgaataccgtatttctgtctggcatattactattttctgcagttgtattgaacactggtttctgaatacatgcatatccttttctgcttgttcagatggggagacacattcttcagaggagtgctggaacccgaacagcctgcctgacacgccacagtccaagacgagcagtgaagtcagccagatcaaaccagaaaattttgaggccctcatccagaagcttgagcaattgcagtcaatgaatgatgaagttgcaaacaagaaagatcatcagtacatttacgagatactcttagcatctggcctcctgcacaaagaacttagcttcgtagccatgcctggtcaagcatggccatcaagctgcctgatcaatccagagctcttcctcattcttgaacaaacaaagccagattttgcttcagcagaccaaactgttaccaagagctccaaagctaacacagaaaagcttcatcgaagaattgtattcgatctggtaaacgaaattacagctcagaagatgaacattcattgctcggcaagtcagtcagccaagtcgcttcaattaaggaagtacaacggatggcgactttttaaggacctgtgcacagaggttgacaggcttcaatctgagagttcagcgataaaatgctctgaagaggatggggatgaaagaatgctattggttgaggatccactgaatggaatagaagattggagcttcgatagtgaatcgccaagcacggttttggagatcgaaagattaatctacaaggacctcattgacgaggtcatatgggatgaggccacagggaagatgcaaggtggacagtggaacctaaagaggcagctgtcatttagtagtacaagctgaatatgcttggcaatacatgtttcccctaggaagcttagcaactacactacactagtgaatgtaacatcttgtattttgctgaagattaaactatagaagaaatataaatattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0603300, RefSeq:Os07g0603300