Os07g0603500

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0603500| Description = Peptidase A1, pepsin family protein| Version = NM_001066748.2 GI:297607582 GeneID:4343838| Length = 2008 bp| Defini...")
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Gene Name

Os07g0603500

Description

Peptidase A1, pepsin family protein

Version

NM_001066748.2 GI:297607582 GeneID:4343838

Length

2008 bp

Definition

Oryza sativa Japonica Group Os07g0603500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25346027..25348034

Sequence Coding Region

25346027..25346074,25346772..25347186,25347594..25347775,25347942..25348034

Expression

GEO Profiles:Os07g0603500

Genome Context

<gbrowseImage1> name=NC_008400:25346027..25348034 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25346027..25348034 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgcggctgcggtggtggcggcgacgggcgacgcagcagcagtggggggaggacctgcgggcgggcagtggtggaggggcggcggggctcggcggcgaggcgtcgctcggccggagattctcctgctgcctcgtcccgcactccgtcaacacatcgtcggcgctcaacttcggcaccctcgccaacgtcaccgagctcggcgcagcgagcacgacgctcgtcgccggggacgtggacagtactacagcgtggtcctcgacttcgtcaaggaagcaaaccgaacaagcgagtccggacttgacgctggagttcggcggcagcggcggccgcgcggcggtggcgctgaagccggagaacgcgtccgtgacggtgcaggaggggacgctgtgcctggcaatcgtggcgacgacgaagcagcagccggtgtccatcctcgggaacctggcgcagcagaacatccacgtcggctacgacctcgacgccggcacggtcatcttcgccaccgccgactgcgcggggagcggccagccaacggagcagacgagcggcaggcaggcgcgctgcgggagaggaagatggcgccgacggggagcgggacggggggagcgaggacgtcgccgccgtcgtcgtccatggccgctgttctcacgcccgcgccgtcagcggcgtcgcccgcgggagtgtgttcagggtcaaggttcactgatcttaatcagtccatctaatgagtga</cdnaseq>

Protein Sequence

<aaseq>MATRLRWWRRRATQQQWGEDLRAGSGGGAAGLGGEASLGRRFSC CLVPHSVNTSSALNFGTLANVTELGAASTTLVAGDVDSTTAWSSTSSRKQTEQASPDL TLEFGGSGGRAAVALKPENASVTVQEGTLCLAIVATTKQQPVSILGNLAQQNIHVGYD LDAGTVIFATADCAGSGQPTEQTSGRQARCGRGRWRRRGAGRGERGRRRRRRPWPLFS RPRRQRRRPRECVQGQGSLILISPSNE</aaseq>

Gene Sequence

<dnaseqindica>1961..2008#849..1263#260..441#1..93#atggcgacgcggctgcggtggtggcggcgacgggcgacgcagcagcagtggggggaggacctgcgggcgggcagtggtggaggggcggcgggggtaggagcagcgcgcgggctcccccgccggccgccacccacgaggcccacaaccacgaggcggcgtgtgcagcgtcaagttcggctgctccaccacgacggccggctcgttcccggccgacgggctggtcgggctcagcggcgacgcggtctccctcgtgacgcagctcggcggcgaggcgtcgctcggccggagattctcctgctgcctcgtcccgcactccgtcaacacatcgtcggcgctcaacttcggcaccctcgccaacgtcaccgagctcggcgcagcgagcacgacgctcgtcgccggggacgtggacagtactacagcgtggtcctcgacttcgtcaaggtcggcaacaagacggtggcatcggcggcgagctcccgcatcatcaatgcaaaaataagctttgttactcctgcaaattgcaagtgaacagaacaatctcaagctaagttgttctttaatcagaagaacaggatatgaacaagcagaatttcaagatattttgtggcgtcggtttcgctttcttacctcgctatagattatgtgagagatcaaattacatgacccataaattgtagagcaatgcaggagtaacactcccagctaagaaattggttgatgtataatactccgatcttctatcttcgttaggcgatgcaaggagaattcagaattctcaccaacagccagcttgctagaatagagtatgagttactgatcttgaatgacctcatgtgtacatccaacaggaagcaaaccgaacaagcgagtccggacttgacgctggagttcggcggcagcggcggccgcgcggcggtggcgctgaagccggagaacgcgtccgtgacggtgcaggaggggacgctgtgcctggcaatcgtggcgacgacgaagcagcagccggtgtccatcctcgggaacctggcgcagcagaacatccacgtcggctacgacctcgacgccggcacggtcatcttcgccaccgccgactgcgcggggagcggccagccaacggagcagacgagcggcaggcaggcgcgctgcgggagaggaagatggcgccgacggggagcgggacggggggagcgaggacgtcgccgccgtcgtcgtccatggccgctgttctcacgcccgcgccgtcagcggcgtcgcccgcgggagtgtgtgagcgcggggcagcggcgggcgaagcaggcggtggagggcggagcgggcacgacgccgaagacagcttcttcccgcgccggcgccaccggccgcctctcccttctcaagcgtcgccgccgccgccgccgcctcccttatcccgtgtcgtcgtcgccaccgccgccgccgccaccgcagccgcctcccgggcctctccgacggtccgaccccgaggtcgcacgcgccgccgccggctgccggacctcctccccatccgccagccgccctgcagagaggagagaagtgagagggagagatgaggaagggagagaagaggggggagagatgacctgtcattctgacatgtggggtctacgtgggttccacgctgactcagccgccaccttagacaaaaccggggtcaaaaccaccagatgatctaaaggaacggttttgttggttgagggacgtccggtatctagctttgtagttgggggacgattttgtaactcgataacaagttgagggaccttgggtgtactttttccaaaatttcaagcgtggacttaggactagtaacagttccatcgtggccttaggcccaataacatcaaatgggctagcctacactccgttgggttaatgggccttctccttctcctactcggccatgatttctcctgaagcttttaataaagttcaacttttgtttcaggttcagggtcaaggttcactgatcttaatcagtccatctaatgagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0603500, RefSeq:Os07g0603500