Os07g0606500

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0606500| Description = Similar to ATP-dependent RNA helicase, eIF-4A family| Version = NM_001188362.1 GI:297725854 GeneID:9271765| Length =...")
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Gene Name

Os07g0606500

Description

Similar to ATP-dependent RNA helicase, eIF-4A family

Version

NM_001188362.1 GI:297725854 GeneID:9271765

Length

6184 bp

Definition

Oryza sativa Japonica Group Os07g0606500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25570507..25576690

Sequence Coding Region

25570509..25570601,25570693..25570772,25570909..25571003,25571284..25571378

Expression

GEO Profiles:Os07g0606500

Genome Context

<gbrowseImage1> name=NC_008400:25570507..25576690 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25570507..25576690 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagaatgcacttcacactgatattgatgttaacatatatgatggtgatactcctagagaagaccgtacgtggatcagagataatgcccgtctgttaattaccaatccagatatgctgcacatgtcaattttgccatgccatggtcaattccaaaggattttgtccaatctcaggtatattgtcattgatgaagcacattcatacaagggagcatttggctgccatactgcacttattcttagaagattgaagcgcatttgttcaaacatttatggcagtcatcctactttcatattttgtacggctacttcagcaaacccgcgtgagcatgtgatggtaggcttgatcttctctttatgttag</cdnaseq>

Protein Sequence

<aaseq>KNALHTDIDVNIYDGDTPREDRTWIRDNARLLITNPDMLHMSIL PCHGQFQRILSNLRYIVIDEAHSYKGAFGCHTALILRRLKRICSNIYGSHPTFIFCTA TSANPREHVMVGLIFSLC</aaseq>

Gene Sequence

<dnaseqindica>3..95#187..266#403..497#778..872#tgaagaatgcacttcacactgatattgatgttaacatatatgatggtgatactcctagagaagaccgtacgtggatcagagataatgcccgtctggtaaacatgtgcttctgaagatatataattataaacagttcgtttcttttttaaaaagtgcatttgaactcaccatctacctccttctcagttaattaccaatccagatatgctgcacatgtcaattttgccatgccatggtcaattccaaaggattttgtccaatctcaggtggaacttattggccttttgtagttttgttttcttgatagctaatttcatcatctgtggtcaattatcttttaacttttagatgaatgcttattatctccataaagagtttccatttctgcaatactatactcaggtatattgtcattgatgaagcacattcatacaagggagcatttggctgccatactgcacttattcttagaagattgaagcgcatttgttcaaacagtatgtataccatgttgaaccagttcttttaattgttagttgacatgatgcttatatatgctatataccataactgtgaattttcttgtttttgcaaatgtgttagtgttacttcagttttcttctcaattaccaatcatcagctacctaaaatctagtaatccctgcaatttctaacttctgagttatatcttggcaaatttatggaatataagaagtatgatctactgatgcaaattaacatataattcttaaaagcatttgcttgttcgatttgcagtttatggcagtcatcctactttcatattttgtacggctacttcagcaaacccgcgtgagcatgtgatggtaggcttgatcttctctttatgttagcttagaaaaaatggttgcacacaagaaaaaaaaaaccagctgttgttaactactgctctaaagcacaagctatcctccaaatgtgtttcttttttctgaagagaaatattattatcactgttgcttatgttttcgtgcacatactctttcgagaatattggccgaacaacaagcatttttccttttgcaaaattctgttaatcacaggagctagccaaactggataatgtagagctgatcgagaatgatggaagtccttgtggttttaaatacttcctcttgtggaatcccccgctacatatgacgaaggaggggagttcaaaagatagcttattaactagacgctcaaggtattgacactttcttttcccttgaattaagctacttatttattttcattgtatttttacttttcaaatttgcaaagttccagatgattttattatagctcaataactgttgtctttcagatatacgcaaatttgttcactggccatcgatgcaggaattctaagaagttgtcctattaaatagtttcttggcaggatgatttgatagtcaagatagagaatacttctttgccaacctgaatttgaaaattttgggccaggggccatactgctttgccaacttcatctctgtactgtcctgtgatccttgagtggcatgttaatttccaacactcaacaacggatccttttatttgatgagatacagtaattgttgtggacttgaaagcaaaagttatgagttcatcacagtacaaagggacgatgtttaatttttaagccaaaaattgtaaacatataattgttctgtagtggcatgtaaatgtgttagttattgcagtttaacacttcagcattttgtttcttatggcatgccagtacagcagtgtttgtttctatattcataattttcttataactactatgtgtaaagatacactaataatttgtatttcgtgtattagtccaatagttgaggtttcttatctattatctgagatggttcagcacgggcttcgctgcattgcattctgtaaaacaaggaagctctgtgagcttgttctagcatacacgtaagaacccattttcttctctgctattcatttttgtgttgttttttcttgttttacattacttgtattcacttatttcttcatatgtcattttgtattgtaggcgtgaaattcttcaagagactgccaaagaattggtagatactatctgtgtatatcgtgcaggctacattgctgaggtcagtattctgttctgtctcacctaatgtcttctttcattgtacttatcaaattttttattgtttcttagaatgaattttggtttgataaaatatgacctcatttagaatttcatcggtgctctcgaactgtatggattcacacaaactgcaatgtatattaccagcttttgttttcttctaaattccatctagtagaatatatatcatctgaatgctgtagacatatcaaagatggtaatgttactaccttctctacttaaaaagaactaagaacttctgttactaatgttacagtgtacatatgcaaatcaagctttcgttttgtcctcttgaagagtatgctgtttgttatgtgaggggtggtgcattgaagcgcttcccacaaaataaagttgtgtactagccagaaactgactcattttctgataaattgagaaaattctaccttctgatatttgcttgctgaatctgaacattttacggttcttcatgtgttgactgttttgttcctgttcatttgaaaacaaattatttcaggacaggagaaaaattgaggccaacctttttcagggaaaacttcttggtgttgctgccaccaatgctcttgaactagggattgatgttggccatatcgatgcaacattgcatcttggatttcctgggagtattgctaggtaagtgagaggtggtctctccaatggatcctatatttctgtctgaagccctactaagtcatagaaacaatttaattttagcctgtggcagcaagctggaagatctggaagaagagcaaaacaatcattagccatttatgttgcctttgagggccctttagatcagtatttcatgaaattcccacataaactatttggcaagccaattgagcattgccaagtcgattcacataatcagaaggtttgtacatcagattttgttggtaaatttaaatgcataaggatctaaaagcttccttcttaatttgaacatttattacagcttttggaacagcatcttgcttgtgctgcttatgaacatccattgtgtgtgcaatatgatgcggattacttttgttctagcctgaacagtgtaatgatggccctgaaagacaaaggctgtctcataaacaatccctctggacctttctcatcaagcatgtggagttatgttggacctgaggtttgttcctttttatttgttatctttacaatacaactcttttggttattatgcaagaagtattttggttttctgcagaaaagaccttcacaggcggtgagcatacgggcaattgagcatgacaaatacagagtaatagacaagttaaataaccggttactggaagaaattgaggaaagtaaggcctttttccaggtaccatgttctaaactgttcctcaactcaaacgtgtgatgaactgtcatacttgttggatctttgaacatactctaatgcccgtaaagagatagataaatttatgagtttgttgaagaaagtcataaaatttatgaactcataagcactatatactgtattgttacctaattgatatactaattatagactgcatctgccactgtgtgttttcatattggtaacttgctatctgaattttttaagcattttcttcattcttaggtgtatgatggagctgtatacatgcatcagggtgtcaattacttagttgaggaacttgatttgtcatcaaggacagcattctgtaggaaagctgatttgaagtattacacaaaaacacgagactacacagacatcaatgtccttggaggagagtttgtaagtattcaaaaggattgtgcattagcctcatatacattctgcttataatcgtctatcattataatattaatccctgccaaattttattattagcaccatttttttgtttaaatctcttctatcctgattttctaggccttatcctgctcattaaatctgaggattattcatctagtctgtcttagcactaacatcttcttttccatgccatgcttattttgactttttaaaactgttttttgagttgttttaactcaatctagttttattcagcctattttttcatctttgttgtacgttttccctacattttttagaagcccatactctcttgaactaatgaaacaggataggacaaatgtttatggtactcctaccacagtaataggtctactaaaatgttttaccatcatttagtcaagaaactttccttgcctgacatgtgcatgagtgatttccatgctgatatttaattaccaatgatctcttctactctaatacatcttgaaggctcatcttccaccaagtatgtgtaaaactaacggggtgaagacaaccgcccaagcaaatgattgcaaagtgactactaaatggtttggtttttatcgcatatggaaatcaaacaacaaaatatctgatagcatagagcttaacctgcctccatattccttcaattcccaggtttgtatctaaaatatatttgtgtgaaccttatcaatatcatggtgcattgccgtccatgattgataccctcatttttcttctgcgatgcctaactaggctgtttgggtgcgaatcccgcactcggtgaaaactaatgtcgaggaaaggaaactacagtttcgaggtggctcgcatgctgcttcacatgctctgctgaacatagtgcctctgtaggtttttcagttttagctgcatcataataaataatcattaatgcagatagttgaatgtgcatacatttgtgcaggcatatgacgtgtaatgcttctgacctaggaacagaatgtgcaaatcctcatgaaacccgtggtattccagacagaattctgttatacgataaacaccctggtggtatcggcatagcattgcaggtaaaatgtttgatgatgtgtagcatacccaggaacctagcgcggttgtaaatatttaccagcaatgctacctctgaactatattatctcgtttatgactatgagatgatattgttcgttgattcggtaaaggttgaagtctagattttcatttatttaatggtgtagatcaaatcactctttggggaactactacttgctgctttagaacttgtttcagaatgcaactgtactagttcagccggctgtccaaattgtatccaagtaagttccaatgctgtactaaactcaactgttgatggaaaaaaacatcttcaagatgataagtttctctcttttttttcagacactaacatgcggtgaatataatgaggttttggacaaggaggcagcaattttgattttgaaggttaataatctgtgcttgctaaagttacctaaccatcttccatcctacacctttcaacgtaaaattcgcttgctctaagatatatattcatgtgcagggagtaattgaatatgaaagatcatattttgaaaaagaagatggttccgaccaaggagtgagatgaggttttaacttttgacgtcttcgtgaagacgagtgaatttggttgacacaggagccatattaatattttcttcacaaggctttctccattggaaatggtagaattgtttggttatcatacggaaatgtagctctaaccagagttcccattcaattataaattatttctggttcaattgtatattttattttgttgccatcctgtaaccaccacctctgtttatcctgaaccaggtcatgggatccccaaattgcctgccacctgcgatccccaagcttctgtgaagaaatatgtcgaaagatttgaacctgtgattaagatatctgcagttttcccttctgatgagatggaagaaaccatcaatttctgctgcgggtactgcaagaaccacatcatcacgtgtaatctaaacaagcctttgaagagttggttgcaatgtttttataagttccatgtttattatctggttcttttaatctctttttgggaaatctgggtgttataatctaggagattaaccaaccacagcactaaaattcaaacttctcagaaggataatacgttgattgctgattaatgaaggatggcg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0606500, RefSeq:Os07g0606500