BGIOSGA017060

From RiceWiki
Revision as of 16:11, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017060, complete gene.

LocusTag

OSIGBA0118P15.1

Ensembl Transcript ID

BGIOSGA017060-TA

Ensembl Protein ID

BGIOSGA017060-PA

Length

4672

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29275188..29279859

Sequence Coding Region

29275188..29275316,29276876..29276950,29277307..29277363,29277455..29277615,29277718..29277858
,29278738..29278840,29278907..29279006,29279125..29279321,29279812..29279859

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29275188..29279859 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29275188..29279859 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCTCCTGGCCGCCGACGCCCAGGTCTCCGCGACCGCAGGCGCCGTCCGTGGAGCGCGCCAAGGGCCCCTCAGGCCTCGACAAGGTCGTGCTCCGCGAGGCGCGGGGATTCTCCGCGGAGGTCCATTTATATGGAGGTCAAGTGACCTCTTGGAAGAATGACCGTGGGGATGAATTACTTTTTGTAAGCAGCAAGGCCACTTTCAAGCCTCCAAAAGCAATCCGTGGTGGCATACCCATTTGCTTCCCCCAATTTGGCACTCATGGAATTCTTGAGAAACATGGATTTGCAAGGAATCGGTTCTGGGCTATTGATGATAATCCTCCACCTTTTCCAACAAGCACTGCTGCTAAAGCTTTTGTTGATCTTATTCTGAAGACTTCTGAAGAAGATCTCAAGATATGGCCTCATAGCTTTGAATTCCGATTAAGAGTTGCTCTTGGGCCTGGAGGAGATTTGGCTCTCACTTCTCGAATAAGGAACACCAACACTGATGGAAGACCATTCTCATTTACATTTGCATACCACACGTACTTCTCTGTATCTGACATAAGTGAAGTGCGCATTGAAGGCTTGGAGACACTGGACTACATTGACTGTCTGAGGGGAAAAGAGCGATCCACAGAGCAAGGGGACGCTATTGTGTTCGAATCAGAGGTTGACAAAATATATCTAGATGCACCAGCAAAAATTGCAATCATTGATCATGAGAAGAAACGGACATTTGTCTTAAGGAAAGACGGGCTTCCAGATGCTGTTTTGTGGAACCCATGGGACAAGAGGACAAAAAACATGCAAGACTTTGGGGATGAAGAATACAAACATATGTTGTGTGTTGAACCTGCAGCCGTTGAGAAGCCCATTACCTTGAAGCCTGGCGAAGAGTGGAAAGGAAAAATGGATCTCTCCGCAGTTCCTTCCAGTTACTGTAGCGGGCAGTTAGATCCAAATAAGGAACACTTAATGTCACTTATATTATCTGGTGCTGATGCTGCATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MATASWPPTPRSPRPQAPSVERAKGPSGLDKVVLREARGFSAEVHLYGGQVTSWKNDRGDELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNRFWAIDDNPPPFPTSTAAKAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIRNTNTDGRPFSFTFAYHTYFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESEVDKIYLDAPAKIAIIDHEKKRTFVLRKDGLPDAVLWNPWDKRTKNMQDFGDEEYKHMLCVEPAAVEKPITLKPGEEWKGKMDLSAVPSSYCSGQLDPNKEHLMSLILSGADAAS</aaseq>

Gene Sequence

<dnaseqindica>1..129#1689..1763#2120..2176#2268..2428#2531..2671#3551..3653#3720..3819#3938..4134#4625..4672#ATGGCCACCGCCTCCTGGCCGCCGACGCCCAGGTCTCCGCGACCGCAGGCGCCGTCCGTGGAGCGCGCCAAGGGCCCCTCAGGCCTCGACAAGGTCGTGCTCCGCGAGGCGCGGGGATTCTCCGCGGAGGTAATTAACAAACCAGCTCGATCGCGCGCCCCGCTCCCTTTCGGTGCTTCTTTCCCAGTTCGATTCGAGGCGCATTTGCGCCGATCCGGTTTGGGGTTTAAAGCCTGCGCGTGTGTGCAGCTTTTGCTGAGGGGGGAGGGGGGGGGGGGGGGATTGGGAATTTCTGTTGCAAATGAGCGGTTTGTGTGATTTGGCAGATGAATAACTGGCGCATTACGCGATCCATGCTGGTTAAGTTCAGGCTTACTATCATTTTAGCATGTTAAATTTGCTGCAAAAAGGCAAATTTTCCGATGTTTATCTTTGGTGCTGTGCTTTATGCCATCTTCATATTACGGATGTTCAATCAATCAAGGGTGTTAGCTGTAATTAAATTTCCGGAATTGGCCCCAACCATATAAGGGATGTGATTTTCTGAAATTAAGAGATGCTTTTGGCCCCCGCGATGAAGTGGTGTAGTTTTGATCACACGTCACTGTGCCATTCACTACTTGATACCCGGATTGTAAAATATGATAGTGAAAGACTTAAAGTAATATACGGACAATTCTCTTGTTGTGGAACCTACCTAGTGGGAGACGCACCGACTATGCTACTTGAAAGCGAAAGGCCTAGGTTATCCTCTTCTATATTTCTAAGATGGATAATCCTTGGATGTTGCGTTTGATGCTATACGCATTTAATTGCCCTTGTTGTACCGACTATGCTACTTGAAAGTTTGTCATTTAACATTATGGCGTATCCTTGGACTTGGTTCAGTTGCATATCATGAGAAACTGGGACTAAATATAGAATTCTGGAGGTGTTGGATTCTGTGAACTCAATTCTGCTATAGATAACTCCATAGTTTCAAGCTAAACTCAAATTGGTTCCTTTTTTCCTGTCGTGTATTTGTTGCAATGGAGGGGACAGAGATAAAAGGCCAATATGAACTTCCTTTTCTGTTAATCTTTCTCCTTCTCCTTCTGGCCAAAGTACAAACTACTCCTGCATACATCTTAGAGCATAGCTCATTCAGAGTCACAAGGCAGAACAAAAAGGTGAAACTAGGTCTCAGTACAAGTATTCACTAATTATATGATGCCGCGAAGTGTGTTAGGGACAAGAAATGGTAAGTAATCAGGGCCAACAAGTGATGAGAAGACATGGTTGTGTGGTGTGGAGCTACACAACGCTATTGTTATAATGGGTGAATGAGTTATATCGTGACAAGTAGGTGTTTAGGTGAGTCTTAGTGTTATCCAGCTATTTCTGTGAATCCTTCTTGCCTCTTGATACAGTAATTAGCTAGCTTTGTTACTTCCAAGTTTTCTAAACTTCCCTTTGGGTATCATGCTTGAATGTAACTAGTTTTTCTTATCTCACATTTTAAATTGTATTGTGTTCTTGCTGATGTAATTTAGTTTTTTTTTATCCGAACTCAAGGTTTATCAATATGGAAGAAGACAACTCTTCATGGACTGGGCATTGACCCTACATGAAAATTTATTATTGTTATCACTTTTTTATAAGTCAGGCTTTAACTCCTGTAGCTAATCAATTATCTTGTCTTTTGCTAGGTCCATTTATATGGAGGTCAAGTGACCTCTTGGAAGAATGACCGTGGGGATGAATTACTTTTTGTAAGCAGCAAGGTATGAAAGCAGTAATGAGGTCGTGGATGACCTCATTGGCTAGGTTATTAGTTTGTTATATAGATAAACTTGCATGAGATGCATTGGCACCACATCCCTGTCATCCTTGTCCCCAGACCCACTAATAAAATTGGCCATTAATTAGAAAAATATATATCCCATTTTATTTCATTAGCACATTCTTAGGTCAAGACCCTTGGATATCTTGGCCCTTCTATTTTTCTAATTGTTTCTTCTGCTCCAATTGACGTGTGTCCAATTAAGTGACAATGTGATGTAATATCTGTTTGGGACTGCTACTGTTTTTAATCATCACATTTCCAAACCGGTGTTGAAATTAAATTCTTCCTTTTCAGGCCACTTTCAAGCCTCCAAAAGCAATCCGTGGTGGCATACCCATTTGCTTCCCCCAAGTATGGCAATTTCATTTATAATAACTTCTCGTATGTTCATGCTAAAAAAACTTGCCTGCCAGAATCATCCAAAGGAACCATATAAATGCAGTTTGGCACTCATGGAATTCTTGAGAAACATGGATTTGCAAGGAATCGGTTCTGGGCTATTGATGATAATCCTCCACCTTTTCCAACAAGCACTGCTGCTAAAGCTTTTGTTGATCTTATTCTGAAGACTTCTGAAGAAGATCTCAAGATATGGCCTCATAGGTTTGTGTTATCCAGCTTATGCTTTGTTCCTTTCTTTGTGTGCATGTTAGTCTCAATCCCCTACTTTTCCTCGTGTTTCTTTGAACAAATAATGGCGTGCAGCTTTGAATTCCGATTAAGAGTTGCTCTTGGGCCTGGAGGAGATTTGGCTCTCACTTCTCGAATAAGGAACACCAACACTGATGGAAGACCATTCTCATTTACATTTGCATACCACACGTACTTCTCTGTATCTGACATAAGGTGTGTGTGCTGCATTCAGCTCCCTTTGTTCTGTTATCGGTTCATACATTTTCAATATGAAACTTATTTAAGGTTGCAGAATTGGAAGAGTGGAGTTCTGTTGTGCAAGACTTTTGGTGGTATATTATTAAATTTTACTTGCTGGGTATTTTCAAAGGGGTCATAAGCATGACCTATGTGCCTTTGTGCCATTCAAGTCTGGTAGATGCGATGTATTTTTTAGGAGCCACTGTACATATGTGGCTACTTCTTTTGATGGGGATATATCATCTGCAAATTCTGTAATTACAAATTCTATTTCACTAGGTGTAAAAGTTGGGACATGCTATTTTCTGTATTTTAGGTTGTATAGACTATAGATAAAAGGAAGTTGGAAGCACATGTTAGAACAAATCATTACAGGTTCTCTCTTTTTTGGCTAATAAACATGTTCAATTAGTAAAGAAGATGTTGCAGAATAGTAACTGTATACTTTAGTGTTAATACTTTTTTTCAATCTGAAGATTCAGTCAATAGAGAAGGCTCACTAGCATTATGGATGGAACTTTTTTTTTTTTTAGTTCAGTGCAGAAGCATTGATAAATTTGTAATCTGAAGCTCTTGGGAAAAAATGTAGCCAAGTAGCTGCTGTCATCGGTTAAAGCAAATGGTGATTTTTTTTAGACATAAGAAATATATTCATGTGGGCATTTCAGCCTTTGATAGAGTGTTGTAAGGACCAATGGTGATTCATGCAATTTCGTGGCATGTGCAACTGCTTGGTTTGTGAACAATGTTAAGCATGTTCAGTCATATTTTTTATATATGTACCTTTCTCAATGTTTGGAACTTGGGAATTCAATTTTCTTCCGTGCTTACCCAAGCTGCAAACTACCTTAGTGAAGTGCGCATTGAAGGCTTGGAGACACTGGACTACATTGACTGTCTGAGGGGAAAAGAGCGATCCACAGAGCAAGGGGACGCTATTGTGTTCGAATCAGAGGTAAAGTAAGCCACTTAAATGCTATAAATGATACTACATAGACTGATCTGTAAATGATACCTTCAGGTTGACAAAATATATCTAGATGCACCAGCAAAAATTGCAATCATTGATCATGAGAAGAAACGGACATTTGTCTTAAGGAAAGACGGGCTTCCAGATGCTGGTAAGCTTATTTATCACAGTAATTTTCTTTTGTTAAAGAATATGATTGTAGATCTTTGTATCCAGCTGTATCAAACACCAATTTTTGCCTGTCAGCGTGCATACTTTTGCCTGTGTAGTTTTGTGGAACCCATGGGACAAGAGGACAAAAAACATGCAAGACTTTGGGGATGAAGAATACAAACATATGTTGTGTGTTGAACCTGCAGCCGTTGAGAAGCCCATTACCTTGAAGCCTGGCGAAGAGTGGAAAGGAAAAATGGATCTCTCCGCAGTTCCTTCCAGTTACTGTAGCGGGCAGTTAGATCCAAATAAGGTTCTTCAAGGCTGAGAGTTCTAATTTACTACACCATGTACAGGTAACGGACTAACGATGTACTTATTCGCTCTAGCTGTGCAATTTTGTGGTGGCTTGGCTGTGAATTTAGAAGTAAAGATACTGTAATTGTAACAGCAGGCACAGATAAGCTGAGTACTCCACCATGCCTTACAGTTCTCTAATGTAGAGAGACAGGAAGTTTTATTAGTATTGGCTGTTGAAGCAATCTATCGCAGTGTCATGTAGCTGATCGCAGAAAACATTAGTAATTTAGTACCTCGTGCTTAAGAGTCATGTACCATCATTTATGCTATGTTTTCATTACATGTCCAACCAGGTTTTGGAGAAATCAGTACAACCAAGAAATATATCGAGTTATTAATTCCATAATAAGTATATAGTATTTGCTCTCATCTTATACTCCATATTTGGTACACATTTTTTTGGTAGCTTCTGCTTTGTTTCTAATCTGTGACTTGTTCTGCAGGAACACTTAATGTCACTTATATTATCTGGTGCTGATGCTGCATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017060