Os07g0608800

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0608800| Description = Similar to Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10) (Pex10p) (PER8)| Version = NM_001066780.1 GI:115473...")
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Gene Name

Os07g0608800

Description

Similar to Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10) (Pex10p) (PER8)

Version

NM_001066780.1 GI:115473292 GeneID:4343871

Length

4496 bp

Definition

Oryza sativa Japonica Group Os07g0608800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25699394..25703889

Sequence Coding Region

25699467..25699653,25699745..25699776,25700527..25700616,25701178..25701272,25701372..25701576
,25701748..25701817,25702301..25702379,25702596..25702729,25702851..25702939
,25703230..25703315,25703411..25703513

Expression

GEO Profiles:Os07g0608800

Genome Context

<gbrowseImage1> name=NC_008400:25699394..25703889 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25699394..25703889 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcggcggcggcggcggggatgcgggcaccagctcgaggggcggcggttccggcggggcccccgcgcgtccgcggcggttccctgaggcggcgcagccggagatcatgcgggcggcggagaaggacgacggctacgccgcgcacgtcaccgaggcctgccgcgacgccttccgccacctcttcggtaccagggtcgccgttgcttatcagaacgagataaaattgcttggtcagtctctttattacttgctaacaactggttcaggccagcaaacacttggagaagaatactgtgatatatctcaggttgcaacctcgcacggacttccgcctacacctgctagacggattctattcattttgtaccaaactaccgttccctatcttgctgaacgcatcagctctagaattgttgcacgtggtattgccctcgaggactctcagcttgatgaccattctgaaagtgatagttctagtataggcactgcagcacaaccatccccaattaggaacagtccttcaagaagcttgagtttttctcatttgtcaaggttgagaggcagagtccataccttgtgggaatgggttcttcggaaatggccttcgatgctaccatttgctcaagattttatacagttaactatccggacaaaccttatgttcttctattttgaaggattgtattatcatttaccaaagcgagcagctggcattcgttatgtattcattgggaagccattgaatcagaggcccaggtatcaaatcttgggtatttttctgttaattcagttatgtattcttggtgctgaaagacttcgaagaagtaatttatcaacaatagctagttcgattaaccaaatctcatctggaggctatccttcatcaagaggtcgaggtgtccctgttctaaatgaagatggaaatataatcagcgacatccgccatgggaaaactgcagatttggctactagttcagaggcatccagtggtaagagcaaatgcaccctttgtctcagtacccgtcagaatcccactgccacaacctgtggccatgtcttctgctggagttgcattatggagtggtgtaatgagaagcctgaatgccccctatgcagaactccgattacacattcgagtttgatttgtatatatcattcagatttctag</cdnaseq>

Protein Sequence

<aaseq>MRGGGGGDAGTSSRGGGSGGAPARPRRFPEAAQPEIMRAAEKDD GYAAHVTEACRDAFRHLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQTLGEEYCDIS QVATSHGLPPTPARRILFILYQTTVPYLAERISSRIVARGIALEDSQLDDHSESDSSS IGTAAQPSPIRNSPSRSLSFSHLSRLRGRVHTLWEWVLRKWPSMLPFAQDFIQLTIRT NLMFFYFEGLYYHLPKRAAGIRYVFIGKPLNQRPRYQILGIFLLIQLCILGAERLRRS NLSTIASSINQISSGGYPSSRGRGVPVLNEDGNIISDIRHGKTADLATSSEASSGKSK CTLCLSTRQNPTATTCGHVFCWSCIMEWCNEKPECPLCRTPITHSSLICIYHSDF</aaseq>

Gene Sequence

<dnaseqindica>74..260#352..383#1134..1223#1785..1879#1979..2183#2355..2424#2908..2986#3203..3336#3458..3546#3837..3922#4018..4120#gaagcgcggacgaggcgagaactccttggagctctgaactctctatcgcgtgaggaggtcgacggcgagagagatgcgcggcggcggcggcggggatgcgggcaccagctcgaggggcggcggttccggcggggcccccgcgcgtccgcggcggttccctgaggcggcgcagccggagatcatgcgggcggcggagaaggacgacggctacgccgcgcacgtcaccgaggcctgccgcgacgccttccgccacctcttcggtgtgttgctttttctccccccgtctcgtagcttaagattagctccgcgtcgcgcgatttgatggtggtttgggttttggtgatgatgcaggtaccagggtcgccgttgcttatcagaacgaggtgagagcttaaattggctgtgttggcttgtggctctactcgggttatgtgatatttgtcgaattctgccggaaatttaacttatcttatacactgtttgctacatagactggtgatatgagagtgaatgcctgaaatcagatgaattgtttcggtgtttgggtaaagtagttgaaaattttcaactattgtatattgtcgtatgactttggtatgattggcaatgagcatttagtgtattagctttttacaacttcaaatttgattgcacacctataatattacatgctttcaagtttcaaggcttacaagttgggtatgcattactgtactggggattaaacttcaactatcaacggacttttagggctgtttgatttcttcggcgttttaactcatgtagctactttgcatttgaattcaaatagctaatttgttctagtcagtatgaactgacaggttatgttattatatatatctgatttccatgcttggtggtgaaattagtttatttatataaaaaaatgaagatggattgcattgtgttgcatctcagtcatcagattctcagtagcatagaatgtgttgtgctgtgtggcagaagcacaaccttttaaaatatgaactacatcaaattgttctctagatctgtaacatagagaaatagtataaattttgttctctgcatttatttcggtgctaatattcttattgattgtccaaaattacatttctcatgaacatttgcagataaaattgcttggtcagtctctttattacttgctaacaactggttcaggccagcaaacacttggagaagaatactgtgatatatctcaggtcatactgcttttttgtctttaatgcacagtttctactcgcagctatttgatttggtacttggtagtataccattagcttgttgctcatctgttgccttatactttgaggggcacacgttgtaaatttgtctctgtaactgtaggtagtatatactggacatgtgctgttatttcagttttatgtaggagacacaagaaacctttgatggagtaaatatggcctttttgtttaattgaggggtctgtttgcatctgaagtgaaacacaaaactgtttattttttcttaaacatgaaattattaggagtcaaataactggtagatcctattaggaaaatgtaaagggaacacaaaatgtgttggtttcagttattgagatagtcaatttttttattcttgtcgacaagacacaaaaaattgttattagcagaagagtcttcaatgaataatattaatcttaataaggtacagccaaattgtaggcttgaagctgccattcacagaaaacataggagtcaaaattcactctatcatgctgatgttgtccatgttgtaaacaggttgcaacctcgcacggacttccgcctacacctgctagacggattctattcattttgtaccaaactaccgttccctatcttgctgaacgcatcaggtttgacaataatagttttggtcattcattcctatttagatcggctatcttgcccaatgaaactgattgcataatttctgctcactgtgattttaacagctctagaattgttgcacgtggtattgccctcgaggactctcagcttgatgaccattctgaaagtgatagttctagtataggcactgcagcacaaccatccccaattaggaacagtccttcaagaagcttgagtttttctcatttgtcaaggttgagaggcagagtccataccttgtgggaatgggttcttcggaaatggccttcggtatgaaattattctaatttgtgtgtggcatccttttcttatagcagaaaaaactctcttgatttagtaatagggaaatgtttctgtagaattaaggttgtagcaacactatgaaaatgcatttcttgcctaacacctatatgttgttgcctgactctaatatgcatgcagatgctaccatttgctcaagattttatacagttaactatccggacaaaccttatgttcttctattttgaaggtatcttatgttcgatacagcatgtcaaattttgaaatgagtttgaggaccaataaatttttatagggtgacaagtagcaaatgaagagttctgtttcttagtactgctcagtggctgccttaaagtcatggaacctgaacttattatgacgcaattagaaaaattaaattaccagaatacaacttattggtaaataacaacccagtttatcataacatctaacagaacatttccagtgaattgtgcaattcactgtcatgctctgctgcatatgagaactctatcatattctacttaactgaaattgctacatctatttcaattttttattttatttatggtaggatgcaacaccatgattctatcaagccttaattaatgtaatggcttagttagagttgacttatgttcttttttttatcacctcaattgaatctgtagcaactgtttgatatttgattaacatttccaatttcttgtaggattgtattatcatttaccaaagcgagcagctggcattcgttatgtattcattgggaagccattgaatcagaggcccaggtactctctgtttctctgctcatctactgtttatactacatgaaacaaatcatacaaacaatgggctatgaaacaccagtaataaatgagtttgagaatactgataataagtcttttcatgatctgtagtttttttggacatcttcacatgtattacctccatttgagagcttaaaattctccagcaggtcacatttaactcattggattttgcaggtatcaaatcttgggtatttttctgttaattcagttatgtattcttggtgctgaaagacttcgaagaagtaatttatcaacaatagctagttcgattaaccaaatctcatctggaggctatccttcatcaagaggtggtacactctttttctcaatttatgaaaccagttttggttctatgttaatgctttgtgtttacttgtttcatggatataaataaatgttccaatattacctttgtgaatggcaaaacaggtcgaggtgtccctgttctaaatgaagatggaaatataatcagcgacatccgccatgggaaaactgcagatttggctactagttcagaggtatttttttctagataaattcattgagatgactactattgtgtagcacaaaatgtttagctttgtgttggacgccaacagcttttaagattatcggtatcaagcacttcatgttatgcaacagaattctatttaaaaaagaaagcaacaaagtaaaaaaaatgttacaatttaagattatgattgaactgaaaatgcttttttaccactattcttatattgtttatgttatttgatgtattttgtgtatgaatataattcttctttcatattgtatgtctaatgttcaggcatccagtggtaagagcaaatgcaccctttgtctcagtacccgtcagaatcccactgccacaacctgtggccatgtcttctgctggtaagactcgttttttggcctttacggatgcagcctgaaatttttctctcatgcactcacttgaatggtatggtaattcatgacataacatgcaggagttgcattatggagtggtgtaatgagaagcctgaatgccccctatgcagaactccgattacacattcgagtttgatttgtatatatcattcagatttctagcaaatgattactagcaaggggtcatatcattctccagtggattcattaaaatgatactgaatccccacattttggcgagaactcttcttctgaagtgttttagtgtaccaaaagaggagagtagaaaccatccaatgaggctgaagatcaatgctgccattcaactgtattgtagagctcaaataacaaaacaatcaaacagaacaaaattttcattagagctcaaacggatacccatgtatatgtacattgtagacacaacttgattttgtagggtagaacagtggctgactggaatcattagagcaaaatgtatcgacctgaaattctgccgggaaatttaactatttgccaatattagattcgacaattattc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0608800, RefSeq:Os07g0608800