Os07g0613500

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0613500| Description = Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-)| Version = NM_001066791.1 GI:115473314 GeneID:434...")
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Gene Name

Os07g0613500

Description

Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-)

Version

NM_001066791.1 GI:115473314 GeneID:4343886

Length

4896 bp

Definition

Oryza sativa Japonica Group Os07g0613500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25915223..25920118

Sequence Coding Region

25915366..25915821,25917001..25917136,25918301..25918437,25919176..25919862

Expression

GEO Profiles:Os07g0613500

Genome Context

<gbrowseImage1> name=NC_008400:25915223..25920118 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25915223..25920118 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtcatccagcgattgcaaggttgtggcggcggcggcgaggaagaaggagaaggaggcggcggcgtggccgtggtcgctgtgggggttcctcctgaccggctgcctcggcggcggcggcggcggagggaagaagaagagcggggggaagaaggtgcgtccccgcggcggcggcggcggcggcctgcggcggctgtcgttcacggacctgacgggggcggcggaccaggacctgtcggtgtcgctggtggggtccaacctccacgtcttcaccgtcgccgagctccgcgacgccacccgcgggttcgtctccggcaacttcctcggcgagggcggcttcgggccggtctacaagggcctcgtcggcgacggcgtcaagccgggcctccgcccgcaggccatcgccgtcaagctctgggatcccgagggcgcccagggccacaaggaatggctggcagaggtgatcttccttggccagcttcggcatcccaacctggtgaagctggtcggctactgctgcgaggacgagaaccgcctcctcgtctacgagtacatggagcatggcagcctcgagaaccacctcttcaaacagattcctgcagtgctgccgtggtcgacccgattaaacatcgcggttggcgccgcgaagggtttggcgttcctccacgacgcagagaagccggtcatctaccgtgacttcaaggcctccaacatcctgctcgattcggattacaaggcgaagctgtcggacttcgggctggccaaggacgggccggagggggacgacacccacgtgtcgacgcgcgtgatgggcacccatggctacgccgcgccggagtacatcatgaccggccacctgacggcgaagagcgacgtgtacagcttcggcgtggtgctcctggagatcctgacggggcggcgcgccgtcgacaagacgcggccgaacagggagcagagcctcgtggagtacgcgcggccgtgcctgcgcgacccgctccggctcatccggatcatggacccggcgctggaggggcgctactcgccggcggcggcgagggaggcggccgccgtcgcctaccggtgcctcagcgggagccccaagaaccgccccgacatgtccgccgtcgtcgacgcgctcgagccgctgctcgtcgccaccgacgacgtccccctcggccccgtcgtgctgttcgtcgcgccggatcaggaggccgacgccgccgccgccgccgacgacgacgaggacgacaaggcccggcggcggcagcggcggacgcggaaggacgagcagcaccgccgccgcagccgcctccggacgtcgcccaagggcagcccgaggaagcccgccgtcgccgctgcttgccggaacgaggagttctgggtgtggcacgtccccgccgaccacaaggcgtga</cdnaseq>

Protein Sequence

<aaseq>MRSSSDCKVVAAAARKKEKEAAAWPWSLWGFLLTGCLGGGGGGG KKKSGGKKVRPRGGGGGGLRRLSFTDLTGAADQDLSVSLVGSNLHVFTVAELRDATRG FVSGNFLGEGGFGPVYKGLVGDGVKPGLRPQAIAVKLWDPEGAQGHKEWLAEVIFLGQ LRHPNLVKLVGYCCEDENRLLVYEYMEHGSLENHLFKQIPAVLPWSTRLNIAVGAAKG LAFLHDAEKPVIYRDFKASNILLDSDYKAKLSDFGLAKDGPEGDDTHVSTRVMGTHGY AAPEYIMTGHLTAKSDVYSFGVVLLEILTGRRAVDKTRPNREQSLVEYARPCLRDPLR LIRIMDPALEGRYSPAAAREAAAVAYRCLSGSPKNRPDMSAVVDALEPLLVATDDVPL GPVVLFVAPDQEADAAAAADDDEDDKARRRQRRTRKDEQHRRRSRLRTSPKGSPRKPA VAAACRNEEFWVWHVPADHKA</aaseq>

Gene Sequence

<dnaseqindica>144..599#1779..1914#3079..3215#3954..4640#cttgccacgcacaccaccaaatcgccaaccaaaaagcaaacccccgcgtcttctccgatcagctccgctcgctcgccgccgacgagctcgccccgccgccgacggcgacggcgcatgctagctgcgtatagcccgcggcggagatgaggtcatccagcgattgcaaggttgtggcggcggcggcgaggaagaaggagaaggaggcggcggcgtggccgtggtcgctgtgggggttcctcctgaccggctgcctcggcggcggcggcggcggagggaagaagaagagcggggggaagaaggtgcgtccccgcggcggcggcggcggcggcctgcggcggctgtcgttcacggacctgacgggggcggcggaccaggacctgtcggtgtcgctggtggggtccaacctccacgtcttcaccgtcgccgagctccgcgacgccacccgcgggttcgtctccggcaacttcctcggcgagggcggcttcgggccggtctacaagggcctcgtcggcgacggcgtcaagccgggcctccgcccgcaggccatcgccgtcaagctctgggatcccgagggcgcccagggccacaaggaatggctggtacttcacccctccacgtgtcccttttccacttaatcatcaaaaaaatagaataaaaaagtgatatgatttcatttgattaattagacatgcacgcgttaatcactttagttagttaatcatttaatgcgataattaaatcagattgatcgattatgtttgtataagattaacaattaagcttggagtaattaatctgagatagtgtagtgccagcttccttggaagagtccctaaatctaatgcttgggggaaacaacattttctcacatggtttcttatagtaaaagagtggccatcaaatatagcttaattggtagagtagtagttgccttgcaaggatcactcaaatatatgtatcccagtatatgaatatcctagggcattgagtaaccctctagataactgaaatttgcaggtgaggaacagtattttttttttctttttgagggtgagagatatgagatatcgttgattttgttttttaaattaatattattgtttttctttgggaaagtgtcgattttccttttatttattgcatagaagcaaagttgtgtcgtttctcctgtagcaacagggaatgttcagtcaaattacccaatcgtttctttcctaatgctatttagtttcccatcaaacagagactgatcagcggtaattagtttggttatcggtcgactagaggttaccacctaaaagactgtattattcaaattttatatttgaaaattttgaacttttacgacttatgactagttaactaccaattattcattaaaaaaattgaatctgaaattttatctggtaaaattcagtaactgtcaggggccagtagcttcggaaacccggtttctgaaacgcttggcctaaacaattaattacagattgtttaatttcagatcaactaatactactactactcacacgatcatctagaacataatcaaacaggtttaaaaatatcttaagcagcacgattaggacgtgcgaggcaaagaacaagggaggggtagttggacgatgtgacggttccggcgacggtcggataagtttccagtgatctaatcatgctgcccaatgcaacagtgccactgaaatggacgtgatcatgctgctgattcgctgctactactactactacctgatttctgatgattctgacgtcgttgcttgcaggcagaggtgatcttccttggccagcttcggcatcccaacctggtgaagctggtcggctactgctgcgaggacgagaaccgcctcctcgtctacgagtacatggagcatggcagcctcgagaaccacctcttcaaacgtaagcactgaactgatccttcgctaattgattttcagcttaagtttgtactactgttccattgatctatagcactagttgccaacttgccattgtgctaattttttatctgacgagatgtctctttaccatgtcatgggtgtgtgtcaaattgaagctttagttcgagtaggactacctaattaactgatggttaatgagtggtttggtacggtcgtgaagtggagatttaaaacagaagttggcttgaccattctcacacaaacgcaatgacctggcacggcatggtgccatggtctgatggtcattgagaaaatgaggttatattccaacttaataatggattatagatatcacaaaatgagagagaagcaaagccattattcagaagtctacttcaaatgggtagctttgctactcaaaaaacttggttgcgtctttgaggctttcagcttggatgatggatatgttttccttcgtttggctagccaacttctttagcttattagagttcagagttctgaccaaactgaatttgactggccttctctgctcacttatgagcttgcaaaacccatggaaaatagtatttcattaggtaagggtcaattatacattcactcacccttgcgagacaagctatagattatgctactagacgttttctaatgctagattacagacgtcagatgaaagtgaggtcacctgtagttgttggatcaatttcaggttgacatagtaatctagtgtgctgcaatcttcccagctgcctcactggctcaagctgattgatttgttcttggtcatgacgaaatctcctaactcgttgactggatatcgaatccctccaaattacaataataacatttcttgaaaattcagaaggcagaaagaacaagaaaccaaaattccacaaaggcgacaacacgcatggccggctagccagtactgttcatcgtcttttttttctcctctgctgcaacaatacgcataaactgctttgtttttccttttccagctttcttattcgattgatgtgtatacataacatggctatcagctatcgattaattaattataatgatgacatgcgcggctttagctgacgttgatcctgctgagatttctgaagatattttcttttcttttcttctttttctgcagagattcctgcagtgctgccgtggtcgacccgattaaacatcgcggttggcgccgcgaagggtttggcgttcctccacgacgcagagaagccggtcatctaccgtgacttcaaggcctccaacatcctgctcgattcggtgagtgccctgtagcttttcctaggtagattgacacctctcatatgcatgcatctcagttagctaggagtttttgatgcacacatcacatatgatatactatatatatagtatcatcctaatgaccttttcatcatcatcagtgaaaaggtagagtaatgactaggaaattgtacttggcacagtttggattttgaagcattttatgacatgattatgtcagagaaacttagtatcatactgtacttatgctgttatagtgttatgcatcacttcatacttaactagtactagttaatggttattatcatattgtacttctctaccaaagaaaaggaaaggaaagcttagtgatgtgggctatggttcataggttgggccgtaagtgagttctgctcaagattgggctaaaaggaggcccaaattttagtttcaccactgaaaagcgtcactgaaaataattttatcgggtcatataatcaaatctttattatctaaaaaatataatcaaatctttacatttttttccatgaccgtgtcaatgttcttttttttgaaagaaaaagcaaatgttaagtttgggcctttaatgggttactactcaagatgggccaaaatcaggcccaacttgaatttcccccactttaaagcccattcattagtaataagcccaagtaagagaatcgcatcaaatgggctaatggtttttgggcctgtgaattttgtccctccctccaggattacaaggcgaagctgtcggacttcgggctggccaaggacgggccggagggggacgacacccacgtgtcgacgcgcgtgatgggcacccatggctacgccgcgccggagtacatcatgaccggccacctgacggcgaagagcgacgtgtacagcttcggcgtggtgctcctggagatcctgacggggcggcgcgccgtcgacaagacgcggccgaacagggagcagagcctcgtggagtacgcgcggccgtgcctgcgcgacccgctccggctcatccggatcatggacccggcgctggaggggcgctactcgccggcggcggcgagggaggcggccgccgtcgcctaccggtgcctcagcgggagccccaagaaccgccccgacatgtccgccgtcgtcgacgcgctcgagccgctgctcgtcgccaccgacgacgtccccctcggccccgtcgtgctgttcgtcgcgccggatcaggaggccgacgccgccgccgccgccgacgacgacgaggacgacaaggcccggcggcggcagcggcggacgcggaaggacgagcagcaccgccgccgcagccgcctccggacgtcgcccaagggcagcccgaggaagcccgccgtcgccgctgcttgccggaacgaggagttctgggtgtggcacgtccccgccgaccacaaggcgtgagcgagtgacacgtggcgcgttgcatcgcacgccatgtcagccgccgctttgctttgctccacgtgtgcgacgaacattgtgtgtgtgtgtgatgaggtctagtagtaacactggtgatttgattaggatttgcatgcatccctgtactctgtttgtttcagtgagatgcagagtgagagagcgatcaattcataattcacagcacaacgaagatcagatcagaaaatatcttatcaggtctcgtcttctttaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0613500, RefSeq:Os07g0613500