Os07g0615400

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0615400| Description = Similar to Oligouridylate binding protein| Version = NM_001066804.1 GI:115473340 GeneID:4343900| Length = 4915 bp| ...")
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Gene Name

Os07g0615400

Description

Similar to Oligouridylate binding protein

Version

NM_001066804.1 GI:115473340 GeneID:4343900

Length

4915 bp

Definition

Oryza sativa Japonica Group Os07g0615400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26017998..26022912

Sequence Coding Region

26018145..26018282,26019483..26019544,26020058..26020160,26020297..26020373,26020468..26020529
,26020621..26020708,26020980..26021055,26021143..26021173,26021288..26021404
,26021925..26022010,26022124..26022297,26022408..26022677

Expression

GEO Profiles:Os07g0615400

Genome Context

<gbrowseImage1> name=NC_008400:26017998..26022912 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26017998..26022912 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccgcagcagcagcagcagcagaagcagcaggcggcggcgctgatgccgccgtccatgtacgcgatgccgccaccgccgccgctccaccaccaccaccacccgctcctcgccgccgcgccgccccagcagcagatagagccaatccttactggaaatctgcctcctggctttgatacgagtacatgccgcagtgtatatgttggcaatgttcatgttcaagtcacagaggcacttctccgagaggtttttcagagtactggtttagttgaaggatgcaagcttatacgaaaagagaagtcatcttatggctttgttgactactatgaccgcagatcagctgcattatcaattttgacacttaatggaaagcaaatttttgggcagcttatcagagttaattgggcatatgctagtgggcagagggaggacacaacagaccatttcaatatttttgttggtgatcttagcccagaggttactgattccgcattatttgcattcttctctggatattccagttgctctgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggctttgtttccttcaggaatcaacaggatgcacaaagtgccataaatgacctaaatggacaatggcttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgagcagcagacttcagattcaaaaaacgtagctgatctgactaacaatttgacagaagacgggaaggagaaagcaaatgaagatgccccagagaacaatccacagtacagaactgtttatgttggaaaccttgctcacgaggttactcaagatgtgctccatcgtcttttccacgcacttggagctggggccattgaggaggtccggatccagcttggcaaaggatttggcttcgtcagatacagcaaccacgcagaagccgccctcgcaatccagatgggaaacggtcgcattctaggtggtaaaccaatcaagtgttcctggggcaacaagccgacgccacccggcaccacgtcggcgcctctgccccctcccgccgctcccagcgtgacggcggccgatctcctcgagtaccagcgcagcctcgccttgagcaagatggtgtcaagccaggcgctgatgcaggctcaggcacagcagcatctgaagcaggcaatggggatgggtgcaggcgtgagccaggccatgtatgatgccagcttccccaacgttggcccctcgcagcagcagctcatgtactactga</cdnaseq>

Protein Sequence

<aaseq>MLPQQQQQQKQQAAALMPPSMYAMPPPPPLHHHHHPLLAAAPPQ QQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKS SYGFVDYYDRRSAALSILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPE VTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGS RQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGN LAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGG KPIKCSWGNKPTPPGTTSAPLPPPAAPSVTAADLLEYQRSLALSKMVSSQALMQAQAQ QHLKQAMGMGAGVSQAMYDASFPNVGPSQQQLMYY</aaseq>

Gene Sequence

<dnaseqindica>148..285#1486..1547#2061..2163#2300..2376#2471..2532#2624..2711#2983..3058#3146..3176#3291..3407#3928..4013#4127..4300#4411..4680#agtcagtccactccactccccaaaccttctcgacccttcttctcccctcccctccccccaccgtcgcgcgcggcgtcgccttcctcctccgcctccgccgcgctacaaccctaggccctcccggcgacggtggggagcgcccgcgcgatgctgccgcagcagcagcagcagcagaagcagcaggcggcggcgctgatgccgccgtccatgtacgcgatgccgccaccgccgccgctccaccaccaccaccacccgctcctcgccgccgcgccgccccagcagcaggtccgtgccgtgcccctcacacagttagctgcccgcgaaagaggctgcgggtttcgcgggagtttggtcgggtaaagcgggggagctttgctagtctcgctgattgatcgcttcgtttcctgtgccttggctctgctagcgtcgaatggtttccaactgttgggttcctagatttcgattgattgacgggtgttgtgtggggtgaaaaagtgaaagcattggtggtctctgactctgatttacgggtgttgtggaaaatgacggatcttttgagtgataccgaggtgatttgcacgaaattgaggggctttctagttgtgtttcatgcatgcttgctgcttgtggggagggtagtgcaatttggaattcaaagacaccttttttctttctcttgtttggagaatacaagtctgagaatttgagtgatccgaatttatgcagtgttctgatacttgatcagttaattttgtttgagattggtcttcaggtgatctggaagttttgtgcttctgattgtaacgagtaattaatcgataaaatcttgaaggacttagggagttttgtgtttctctttgtttgattttgcaaaggtatagcctttgggacttttgggtgatttaggtccgtttggtttgaatccttgcagggttggggattgtttgggcttaggtgcccacttttttggtgcttcttgttgtcttggttaggaatattttgattccttttggttggttaagttagttcaaccttatctagttgggaatggagatcacattactcttgttgctgtgttgcacggatcacatcattgtgatgtactgatgtctaagtaaaacatgcatcattgatgaggtctgatttccttttactcaggttaggatttgtagggcttggattttagctctcatttgtaaggttcctattttattactagctgaaatttttctatatttgacatatacgtctattctgtaccctgattgatcgggagcgccgtttttacccccttttgctggcaaataaagcatgcagctttctcccttcctctgttacatttatctcattggaactttgctgtagtatctgcaggatgccttgtgtagtttgcatgtaccaggcttctttttgctaaggcgtttcctattatttgtagatttttatttcttctttctttgtttttttacatttttatttttgcagatagagccaatccttactggaaatctgcctcctggctttgatacgagtacatgccgcagtgtgtgagtcccattagggattctttttattttttttattttcttttcttcgtatgcttgaaaatgcataagttcatgctttggactttagggcatcttttcctgtacacatgtaatgtaatttaatacatctagcaagaatcttccattagctgtgtacacaagcacatattttgttggtgaagcttttgcaagtctatctgctagccactgttttcttaattgcatgttggccatgtatacattaaaactttgacacaatggtattttggtaacatgaaattttacatactatatttatttcatagctgaaagtaaggtgaaaatttgtgccttgaatacatttacaagatctatatgcattaatccttactaaaaattgaaacatgtctaatgttttctgttcacaaaataacacggcaaatttattaatctttgtatttcttatgtaagagcatattttgcatggaagcatggtctaatgttttctgatatgctctattttcataattttagatatgttggcaatgttcatgttcaagtcacagaggcacttctccgagaggtttttcagagtactggtttagttgaaggatgcaagcttatacgaaaagagaaggtttgctttcattacctgatttttctgtttatttcagttatatttttgaaagcgtatcctttgtggggtgattcagtctgacacaactattgtcatgaggatctcatgatttacttttaaacatatgtttctgcagtcatcttatggctttgttgactactatgaccgcagatcagctgcattatcaattttgacacttaatggaaagcaaatgtaagagaaaagctattcatttctgctagtttgttgaagcttaattatgtttttttttctccccaaaaacactcattgaagaaaaatgatacagttttgggcagcttatcagagttaattgggcatatgctagtgggcagagggaggacacaacaggttgatactatgtttgctttttataccagtattctcagaattttttgatataacttttggcaagacatggtaaattttatcacttttgcagaccatttcaatatttttgttggtgatcttagcccagaggttactgattccgcattatttgcattcttctctggatattccagttgctcgtaagtatttattacctttatccactagtgttttctgccattggcccaatttggcttttcctaccccagctttataatattttgtgcgttgtcagctgtcctcttttaattcttctgttgtcacgatttcataataatcatcagttgtgtcagtagtacctctaccgccactaggatacatcctagttcacttttcataccattttctttatcttactaattaaattaaggtttatctggatcttaaattgcactactttctggtatctagtgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggctttgtttccttcaggaatcaacaggtatggtaattctaaaagcacgtgcatttgtatgggttctttgtttactcctgtcacttaaaaaaaagttttttggtgagcttacaggatgcacaaagtgccataaatgacctaaatggtatgtcatgcacaaactccaaatatttctcatttaagaatgtacaatgtttttgggttgtgtggttttggatttggttggcttggtgccttattcatctgatcttattcataggacaatggcttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgagcagcagacttcagattcaaaaaacgtagctgatctgactaacaatttgacaggtaatctttatggatatgtaacatatttgtgttagtcatattttaatattttaaattccttccatttgctagtatgtactttcagaagacagaataaattaaagcatagtgttttagctgtgcattgcaaatgtgagaggtttggtaattaaatataaaaatatagaataatatatagagagccttcaaacatattgcttcctgcaaatggtagaggtttggtaattaaaaaccacttcctctttgagttcttctaacaaataactcaggcagtaacattacaaaacattgcctggtttaaccagaatatttttgtaacgaatgatggtgttgatctgttctactcctattttcattatgattttgctgtgtgcgtcttctttcgttgttgtgctgcgcacttgcatgatactcttagccctgctgttggaacgaagggctgcagttcattgttcttaatacgatgggcttcagtatgaatatatgatgagttgtgctgttcttttttaatcttgttcagaagacgggaaggagaaagcaaatgaagatgccccagagaacaatccacagtacagaactgtttatgttggaaaccttgctcacgaggtaattctatttcagcgttactaaatgtatggcatattgaatccttcgaacactagacgctgtgaatgttgttccggttgtcttactgataaattgacgtctttgaatttcaggttactcaagatgtgctccatcgtcttttccacgcacttggagctggggccattgaggaggtccggatccagcttggcaaaggatttggcttcgtcagatacagcaaccacgcagaagccgccctcgcaatccagatgggaaacggtcgcattctaggtggtaaaccaatcaaggtgactcacatttcccgcttcaccgttttcgcgcatgccgttatcattcctcttaactccattgaaccctaagattcacctttgacacctggttacacttgtctctccagtgttcctggggcaacaagccgacgccacccggcaccacgtcggcgcctctgccccctcccgccgctcccagcgtgacggcggccgatctcctcgagtaccagcgcagcctcgccttgagcaagatggtgtcaagccaggcgctgatgcaggctcaggcacagcagcatctgaagcaggcaatggggatgggtgcaggcgtgagccaggccatgtatgatgccagcttccccaacgttggcccctcgcagcagcagctcatgtactactgaataaaattcctgcgagctcgtcgctgtaatttgtgactcgatcagtctgatctctttttttttctggttttgttttagctaatgttactttttttacgtctatatttagagtgtttctggagctattttcgatgttgtttcgtacatggatggatggagaatgtgtaatggtatatgtgtgtgaaggatgtaagctgacaattttatataatcttagtctaatgttattgctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0615400, RefSeq:Os07g0615400