Os09g0478000

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0478000| Description = Similar to CSLE1 (Fragment)| Version = NM_001070003.1 GI:115479748 GeneID:4347369| Length = 2405 bp| Definition = O...")
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Gene Name

Os09g0478000

Description

Similar to CSLE1 (Fragment)

Version

NM_001070003.1 GI:115479748 GeneID:4347369

Length

2405 bp

Definition

Oryza sativa Japonica Group Os09g0478000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18955344..18957748

Sequence Coding Region

18955344..18955350,18955616..18955713,18956459..18956653,18957066..18957197,18957575..18957748

Expression

GEO Profiles:Os09g0478000

Genome Context

<gbrowseImage1> name=NC_008402:18955344..18957748 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18955344..18957748 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggttcaattcttactttctatgctctatgggaggcctccgtgtttgcaaagcactggctaccattctgcaaaaagttataacattgagccaaggccaccagctgctttcttcgtggagtcagaagggcatcacaatctgtgcaccccaaaagaatggtcatttatcaagatacttatagatgggaaaagccaaaatgtagtagatgatgacggaaatgtgctaccaagcctggtatacatggcacgtgagaagaggcctcagtaccaccataacttcaaatcttgggctatgaacgctttgatatgtaacaaccctattatcttgaatgtggactgcgacatgtattccaataacagtgactcaatcagaggtacgttgtgcttcttccttgatgaagaaatgggccacaaaatcggatttgtacagtaccctcagaactataacaacatgaccaagaacaatatatatggaaattccctccttgttctcaatgagaggatgggagtcagtttacatcaatcctcaaagagcagcacttttgggtgtgggtccagcaacacttgcccagacaatactgcagcgcaagagatgggattatga</cdnaseq>

Protein Sequence

<aaseq>MEVQFLLSMLYGRPPCLQSTGYHSAKSYNIEPRPPAAFFVESEG HHNLCTPKEWSFIKILIDGKSQNVVDDDGNVLPSLVYMAREKRPQYHHNFKSWAMNAL ICNNPIILNVDCDMYSNNSDSIRGTLCFFLDEEMGHKIGFVQYPQNYNNMTKNNIYGN SLLVLNERMGVSLHQSSKSSTFGCGSSNTCPDNTAAQEMGL</aaseq>

Gene Sequence

<dnaseqindica>2399..2405#2036..2133#1096..1290#552..683#1..174#atggaggttcaattcttactttctatgctctatgggaggcctccgtgtttgcaaagcactggctaccattctgcaaaaagttataacattgagccaaggccaccagctgctttcttcgtggagtcagaagggcatcacaatctgtgcaccccaaaagaatggtcatttatcaaggtatgtgcatttcttaacattcttctttaagacatcgataatcaacaagtatgggatgaatatgcactcacagataattacggcttataattctcaacatttggtatggcaactgatcttcttttatcggcaggacctgtacaaagaaatgacagaggattgatacagctgtcatgttaggaaaaattcctgaagaaattaaactgaatcataaaggatttgatggaaggaactcagaaattgcctcaaaaatcatccgccaattgttcaggtaggctttactgtcctaaaaatttcatgattacaaagtaaagaaatccatactacttccattttgggaatttcaggttctaaaaaaaatgttgcttctttgatagatacttatagatgggaaaagccaaaatgtagtagatgatgacggaaatgtgctaccaagcctggtatacatggcacgtgagaagaggcctcagtaccaccataacttcaaatcttgggctatgaacgctttggtgtgttccctaaccttgtttagttttaccttgaaacaaggttaacaaatttattataaaatccctactttccattagaggttaccttacccattttgtaataaatacaacaatgcaacaagttgttccacactttcattttgaaaaatgaagtatcaagtaggtttcagttaaaaaaaaaaaagaagtatctagtaggttctacaagtgcaacaaccaaccaaaaggttatgtattgctactgtttgcttcagtcagaaaaaaaatgcatggagttagaaccatatggtcagttgtgcattgttcaatgaacaatttatcgcagcattttcacaaagtattctaacattcaggaaatgccttattcctgaaagtattttaaaatatgttaaatttcaatcctgaaatatagatatgtaacaaccctattatcttgaatgtggactgcgacatgtattccaataacagtgactcaatcagaggtacgttgtgcttcttccttgatgaagaaatgggccacaaaatcggatttgtacagtaccctcagaactataacaacatgaccaagaacaatatatatggaaattccctccttgttctcaatgaggtaagttgtatcaaattgtacttttaatacattctcttgtttttaataatctatactatcaatatacattattcggctaacaaaacaattcaatgttaaggtggatatgtgtggtatggacagtgctgttggctcaccctacattggttgttatgggcatgggccaaggccatgcaacagtttaggcatgataaattagaaataagtcacataaatataggagattacctagttaggaaagagatgaggtttattagaaagctagagacagagattggattggtttatataatactagagactagttccttatgtatctagtctgtcctccctatatatataaagggaccccatggactctataatcaatcaatcaatctctaaagttagccctaagcctcagagcctcttttagctcagcagagagaagccctgcctctgctattagagggcgagcgcctatcccccggtcttaggacccttaccctagccaatccataacattggtactggacgtttccatataagagagatcctttgtgtaggaggttcagcaaagactacaaggaagactgggagaggaataaaggaaaaaacacaggcagacatatatgagattgaagagaaggcaaaatctttagcaacctgcacttgtgaacataggacacagtggggaaatgagattgaaataaaatatggttgcacggtagaagataatcttcactgaattggcgataaattgcagaggatgggagtcagtttacatcaatcctcaaagagcagcacttttgggtgtgggtccagcaacacttgcccagacaatactgcagcgcaagagatggggtgaggataatttaacactttttttttcaaagaactgccccttcttgattggacatggaaaaattaagttacaactacagatgggctattgcttatttgggttatgggcatccaactcactgcctacgctttattatgttatgtttccatcactaggcttgtgaagggcacccctctattcccagaggtaatattacatgataaacctcactttggtttcatattgctcttattaaaactaatcctatgtttatatgccatttagattatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0478000, RefSeq:Os09g0478000