BGIOSGA017490

From RiceWiki
Revision as of 16:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017490

Description

ADP-glucose pyrophosphorylase large subunit

Definition

Oryza sativa Indica Group BGIOSGA017490, complete gene.

LocusTag

OSJNBA0017N18.13

Ensembl Transcript ID

BGIOSGA017490-TA

Ensembl Protein ID

BGIOSGA017490-PA

Length

3388

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30219471..30222858

Sequence Coding Region

30222646..30222858,30222415..30222534,30221841..30222011,30221638..30221727,30221442..30221528
,30221296..30221351,30221102..30221195,30220906..30221018,30220746..30220818
,30220478..30220558,30220220..30220306,30220033..30220137,30219828..30219934
,30219665..30219725,30219471..30219572

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30219471..30222858 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30219471..30222858 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGTTCAGCAGTGTGTTTCCCTTAGAGGGTAAAGCATGCGTGAGCCCAATAAGGAGAGGTGGTGAGGGCTCAGCTAGTGATAGATTGAAGATCGGGGACAGTAGCAGCATCAAGCATGATAGAGCAGTGAGGAGGATGTGTCTTGGTTATAGGGGCACCAAAAACGGTGCACAATGTGTGCTCACCTCAGATGCTGGCCCAGACACTCTTCATGTCCGAACATCATTCCGGAGGAACTTTGCGGATCCAAATGAGGTTGCTGCTGTTATATTGGGTGGTGGCACCGGGACTCAACTTTTTCCTCTCACAAGCACAAGGGCCACGCCTGCTGTTCCTATTGGAGGATGCTATAGGCTTATCGATATCCCCATGAGCAACTGTTTCAACAGTGGCATAAACAAGATATTCATAATGACTCAATTCAACTCAGCATCTCTTAATCGTCACATTCATCGTACGTACCTTGGTGGTGGAATCAACTTTACTGATGGATCTGTTGAGGTATTAGCCGCTACACAAATGCCTGGGGAGGCTGCTGGTTGGTTCCAGGGTACAGCAGATGCAGTTAGAAAATTTATCTGGGTTCTTGAGGACTATTACAAGCATAAAGCTATAGAACACATTTTAATCTTGTCAGGAGATCAGCTTTATCGTATGGACTACATGGAGCTTGTGCAGAAACATGTTGATGACAATGCTGACATTACTTTATCATGTGCTCCTGTTGGAGAGAGTCGAGCATCTGACTATGGACTAGTGAAGTTCGACAGTTCAGGCCGTGTAATTCAATTTTCTGAAAAACCCAAGGGCACTGACTTGGAAGCAATGAAAGTGGATACCAGCTTTCTCAATTTTGCCATAGACGACCCGACTAAATTTCCCTACATTGCTTCGATGGGAGTTTATGTCTTCAAAAGAGATGTTCTTTTAAACCTTCTAAAGTCAAGATATGCAGAACTACATGACTTTGGGTCTGAAATCCTCCCAAGAGCTTTACATGAGCACAATGTACAGGCATATGTCTTCGCTGACTACTGGGAAGACATTGGAACGATCAGATCGTTCTTTGATGCAAACATGGCCCTTTGCGAGCAGCCTCCCAAGTTTGAGTTTTATGATCCAAAAACTCCCTTCTTCACTTCACCTCGATATTTGCCGCCAACAAAGTCAGATAAATGCAGGATTAAAGATGCGATAATTTCCCATGGCTGTTTCTTGCGTGAATGTACCATCGAGCATTCGATAGTTGGAGTCCGCTCACGCCTTAACTCTGCATGTGAGCTCAAGAATACCATGATGATGGGTGCGGATTTGTACGAAACTGAAGATGAAATTTCAAGACTACTGTCAGAAGGCAAGGTCCCCATTGGTGTAGGGGAAAACACAAAGATAAACAACTGCATCATCGACATGAACGCGAGGGTTGGAAGGAACGTGGTCATCACAAACAGCGAGGGTGTCCAAGAAAGTGATCGGCCTGAGGAAGGGTACTACATAAGGTCGGGAATCGTGGTGATCCTGAAGAACGCGACCATCAAGGACGGGAAGGTCATATAG</cdnaseq>

Protein Sequence

<aaseq>MQFSSVFPLEGKACVSPIRRGGEGSASDRLKIGDSSSIKHDRAVRRMCLGYRGTKNGAQCVLTSDAGPDTLHVRTSFRRNFADPNEVAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFIMTQFNSASLNRHIHRTYLGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPKGTDLEAMKVDTSFLNFAIDDPTKFPYIASMGVYVFKRDVLLNLLKSRYAELHDFGSEILPRALHEHNVQAYVFADYWEDIGTIRSFFDANMALCEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGCFLRECTIEHSIVGVRSRLNSACELKNTMMMGADLYETEDEISRLLSEGKVPIGVGENTKINNCIIDMNARVGRNVVITNSEGVQESDRPEEGYYIRSGIVVILKNATIKDGKVI</aaseq>

Gene Sequence

<dnaseqindica>1..213#325..444#848..1018#1132..1221#1331..1417#1508..1563#1664..1757#1841..1953#2041..2113#2301..2381#2553..2639#2722..2826#2925..3031#3134..3194#3287..3388#ATGCAGTTCAGCAGTGTGTTTCCCTTAGAGGGTAAAGCATGCGTGAGCCCAATAAGGAGAGGTGGTGAGGGCTCAGCTAGTGATAGATTGAAGATCGGGGACAGTAGCAGCATCAAGCATGATAGAGCAGTGAGGAGGATGTGTCTTGGTTATAGGGGCACCAAAAACGGTGCACAATGTGTGCTCACCTCAGATGCTGGCCCAGACACTCTTGTAAGTTTCATACTGTCAGTTATCAAATTGGTGGTTTCTCACTGTCCTTTTGCTATCGAATGCTATTATGCTGTTAGCATATCTAAAGCCTGATATGACAAATTATTACAGCATGTCCGAACATCATTCCGGAGGAACTTTGCGGATCCAAATGAGGTTGCTGCTGTTATATTGGGTGGTGGCACCGGGACTCAACTTTTTCCTCTCACAAGCACAAGGGCCACGCCTGCTGTAAGATGATACATTCAATTTCTGAGGTTTATTAAGTTTCAAGTTGATAGGCTTTTTGCAGTAAAGGGGTACCATTTGCAAGGAATTCTCAGTTTGATTTGCCTGCTTTGAGTTTGACAAGTCGACATGAATCAGAAGCATGGCAATTGATATGCATGACACCAGTTAAAAGTTTAGCTAATTCAGTAGCATGTTTGAGCATTGTGTATAAATTAGTATTTGGCTGTGGCCCAATGATTTTGGTAGCTGGTCCCCATGGTGCCCTCCACGGTTCCACTTTAGCCAACATGATTTCTTTTCAAGCTCAACGCTATCAAAGACTATCATGTGGCTTGTTCAGAGTTCAGTCATCTTGAAATTCCTGGCCTAATCTTTGTTTCTTTCCTTTTGTTGCATAACATAGGTTCCTATTGGAGGATGCTATAGGCTTATCGATATCCCCATGAGCAACTGTTTCAACAGTGGCATAAACAAGATATTCATAATGACTCAATTCAACTCAGCATCTCTTAATCGTCACATTCATCGTACGTACCTTGGTGGTGGAATCAACTTTACTGATGGATCTGTTGAGGTAATTCACCTTGACCTGTGATGCTTATGTTCTTCGATGATTTGCGTGGTTGTTGACTTGGTGAAGAAACAGTCACAGCTCACATTAACTGAAATGATTTTTGCCAATTGAAGGTATTAGCCGCTACACAAATGCCTGGGGAGGCTGCTGGTTGGTTCCAGGGTACAGCAGATGCAGTTAGAAAATTTATCTGGGTTCTTGAGGTAAATACTGTTTAGAAGCACACGGTGGATCTGCAGCTCATACTTGGATCTGTATCGCTAAAGTAATACTCACTATGTTGTATGTAATGTTTCTGATGTATCTGTTCAGGACTATTACAAGCATAAAGCTATAGAACACATTTTAATCTTGTCAGGAGATCAGCTTTATCGTATGGACTACATGGAGCTTGTGCAGGTTTGTCCTGGCCTCATTCTTCTGTACTTTTCCACATGCTTTTCTTTTGAACTGGCTGACTCTTCAATATATGCCATTCACCGTTTGCAGAAACATGTTGATGACAATGCTGACATTACTTTATCATGTGCTCCTGTTGGAGAGAGGTATATCGATTGTACAATATTCCAAAAGTTAGATAATATTATCAGCATTTGTCCTCAGAAAATGCAGAGCATCCTGATTTGGTTTTCTTTATTATGGTAGTCGAGCATCTGACTATGGACTAGTGAAGTTCGACAGTTCAGGCCGTGTAATTCAATTTTCTGAAAAACCCAAGGGCACTGACTTGGAAGCAATGGTTAGAATTAACCTTATCCCATACTCAGATATATATTTGAACTTAATTGCAGTATCTGAAGTATAAGTCATTGATCATTGCAGAAAGTGGATACCAGCTTTCTCAATTTTGCCATAGACGACCCGACTAAATTTCCCTACATTGCTTCGATGGGAGTTTATGTCTTCAAAAGAGATGTTCTTTTAAACCTTCTAAAGTAAGAATCTTATTGCAGTAGTATGGTTTCTCCTACAGGGCACATGCTATAGAAATATAGAATTGTAGTCTAACAGTGTCACTTTAGGTCAAGATATGCAGAACTACATGACTTTGGGTCTGAAATCCTCCCAAGAGCTTTACATGAGCACAATGTACAGGTAAAAGTTTTTAAGCTTGAGCACTATTATGTGATTTCCTTTCACTGTTTGGGAAGTCATGCCTCATGTTCAATTCAGTAATAGTCCACATTCAGTCTGAATTGCCTACTTGCACCAAATGTAGTTTGTGCAATCATGTCCGCCTTGTGGCGTGAACTGAACATCCATCTGCTTTTGTTGTTTATAGGCATATGTCTTCGCTGACTACTGGGAAGACATTGGAACGATCAGATCGTTCTTTGATGCAAACATGGCCCTTTGCGAGCAGGTATTTGGTCTGCTTCAAAATTTTAGCACTCTCAAACTGTAGAGGTAGTTGGATTGTAACACATCTGAATAATGCATTTAATAGATCTGTACAATTGTTAAGTACAGTTCAGACTTTTCAACATATTTAATACTTTCATTCTCTATTTACTCACAAGTTCCTCCATTGCAGCCTCCCAAGTTTGAGTTTTATGATCCAAAAACTCCCTTCTTCACTTCACCTCGATATTTGCCGCCAACAAAGTCAGATAAATGCAGGGTATGAGTCACATGGAATGAACTTTCTATATCAAACTTTAATATGCGTGTTTCATATCTGATTTCGGAATTTGTGCGTGCAGATTAAAGATGCGATAATTTCCCATGGCTGTTTCTTGCGTGAATGTACCATCGAGCATTCGATAGTTGGAGTCCGCTCACGCCTTAACTCTGCATGTGAGCTCAAGGTACTCTCTTTCACCAATGAAATTAAACTGAATCCATATGCATATGCCTGTATAGCATAATTGAACAACACTGGGATTGTTGCAAACAACACCTGCAGAATACCATGATGATGGGTGCGGATTTGTACGAAACTGAAGATGAAATTTCAAGACTACTGTCAGAAGGCAAGGTCCCCATTGGTGTAGGGGAAAACACAAAGATAAAGTGAGATACTGACCTGAAGGCTTGAACCACAATGCATTATGAACACATCTAGCAATATCCTGTTTCGAGCGCGATCTAAACCCGTCTTTTGATGCATTGTAGCAACTGCATCATCGACATGAACGCGAGGGTTGGAAGGAACGTGGTCATCACAAACAGCGAGGTAAGCGATCAAGCGAAAAGGAATTCCAAAGTTGCAACCTCCCAACCCATGTTTCATACAAAATTCTGAACACTGCAACCTGTTGCTGATAGGGTGTCCAAGAAAGTGATCGGCCTGAGGAAGGGTACTACATAAGGTCGGGAATCGTGGTGATCCTGAAGAACGCGACCATCAAGGACGGGAAGGTCATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017490