Os07g0616900

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0616900| Description = Protein of unknown function DUF500 family protein| Version = NM_001066814.1 GI:115473360 GeneID:4343911| Length = 39...")
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Gene Name

Os07g0616900

Description

Protein of unknown function DUF500 family protein

Version

NM_001066814.1 GI:115473360 GeneID:4343911

Length

3910 bp

Definition

Oryza sativa Japonica Group Os07g0616900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26095907..26099816

Sequence Coding Region

26096696..26097502,26097587..26097787,26098430..26098625,26099320..26099504

Expression

GEO Profiles:Os07g0616900

Genome Context

<gbrowseImage1> name=NC_008400:26095907..26099816 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26095907..26099816 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggccccgaatgaagtgacatcgtactcttccctctccaaaatcgatagcaacaaccagggaggtcatctatctagtctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagccagatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttcaaatatcaatttgaagactgtcctaactgggctggctgctattgtttcgggcacaaataagaaccaggataatacactgcagcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtgatgttaatgtacatccatctgtatgcgttcctagtgcgccaccactacttgaaacaaatgctttacaatacagtgcatacagggaggtgctacaggcagatcctccagaatggttaccagatagctctaccagtgtgtgcctgcaatgcagtttgcctttcacagctctgactcgtggaaggcaccattgccggttctgtggaggtattttctgtaaagattgttccaagggaagatgcttgatgcccatgaagttcaggcagcgtgatcctcagagagtgtgtgatgcttgctacgataggctcgatccacttcagggaatattgatcaattacaatagcaatgccatgcagccagcaaaacatgatgttatggattggacaagcacaagaagctggttgaacttgcctgttggtttatcaatggagtatgagatatacaaggcaacaaatacactaaatagatattgccaggttgctagattaaaccctgagaagtccatcccatcatctattctaaagggagctaaggggcttgctgtgataacagttgccaaggcgggtgcagttcttacatacaaagttggcactggccttgtagttgcccgaagatcagatggatcatggtctgccccatcagcaattgcatctgttggcctgggatggggagttcagtttggtggcgaactgacagattttataattgtacttcatgatcgtaaggctgtcaaggcattcagcagtcgcatgcatctttctcttggggcaggattaagtgcagcagcaggaccaattggcagggcctttgaagcagatgttagggccagtgaaaaaggttctgggctctgctacacttacagctgtagcaaaggtgcctttgttggggtctcattggaaggaaatgtcgtgacaaccagatcagagaccaatctacgcttctatggcgatgcttacttgaccacaactgatatcctgtttgggaaggtggagaaacccagagccgcccagcccctgtactcagctctagatgatctattctctaaaatggtttactag</cdnaseq>

Protein Sequence

<aaseq>MGAPNEVTSYSSLSKIDSNNQGGHLSSLVPANIYPAQDYLYEPS LEPDFPSEYDSREDPFVPTRASSNINLKTVLTGLAAIVSGTNKNQDNTLQQQSFSTDV SFLGFDKDGDVNVHPSVCVPSAPPLLETNALQYSAYREVLQADPPEWLPDSSTSVCLQ CSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQRVCDACYDRLDPLQG ILINYNSNAMQPAKHDVMDWTSTRSWLNLPVGLSMEYEIYKATNTLNRYCQVARLNPE KSIPSSILKGAKGLAVITVAKAGAVLTYKVGTGLVVARRSDGSWSAPSAIASVGLGWG VQFGGELTDFIIVLHDRKAVKAFSSRMHLSLGAGLSAAAGPIGRAFEADVRASEKGSG LCYTYSCSKGAFVGVSLEGNVVTTRSETNLRFYGDAYLTTTDILFGKVEKPRAAQPLY SALDDLFSKMVY</aaseq>

Gene Sequence

<dnaseqindica>790..1596#1681..1881#2524..2719#3414..3598#cctctcctcttctccgacgaaaccccaatccccaactccgacgcttcctccgccccggcgatcgccgccacccgaatccccccgcgaccgcctccgattgattcgatccggtaagcgccaagctcgctgatccccttcctctcctggattcgccttcgtttttgctcgccgatgtacggattaggatgggatttgggggcggccagctagcgagcggtgtgctctgctctgctcctggcgagcgatcggattgcgttgaattgggggttggattcatcgcgtctattattgattagtgttgatttggtgtagccgtgtagggttaatttgttggtctatcccatgttagggtttcgtgatctttgtttgtcttagttgcttgcacatgcacgctaggtgtagcatggttcggattatctctattggggaattatttcaagcttagctgtaagagcgcagctcacctttagtttcagttaaatatgcattcagatagatttatggtggcacttggaatggcatggatcctaaccgtgacctgttcagtttgttgcattggttattgttgatgttgaaagtgtacaggtagaaagctcctttgttttttttttgttttttttttggggtagaagtacaaagctactactaagaatcgtcattctcaaatacaaaggctttgttgtttttggactcaaattgtaatgcctgtttgctgactgtaagttatgtgcaatcacttgcaggtgatcttgtgttgttgccacatgattgttgtctctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaatcgatagcaacaaccagggaggtcatctatctagtctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagccagatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttcaaatatcaatttgaagactgtcctaactgggctggctgctattgtttcgggcacaaataagaaccaggataatacactgcagcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtgatgttaatgtacatccatctgtatgcgttcctagtgcgccaccactacttgaaacaaatgctttacaatacagtgcatacagggaggtgctacaggcagatcctccagaatggttaccagatagctctaccagtgtgtgcctgcaatgcagtttgcctttcacagctctgactcgtggaaggcaccattgccggttctgtggaggtattttctgtaaagattgttccaagggaagatgcttgatgcccatgaagttcaggcagcgtgatcctcagagagtgtgtgatgcttgctacgataggctcgatccacttcagggaatattgatcaattacaatagcaatgccatgcagccagcaaaacatgatgttatggattggacaagcacaagaagctggttgaacttgcctgttggtttatcaatggagtatgagatatacaaggcaacaaatacactaaatagatattgccaggtatgcatgatttgggttgttttgctcaaagagattacctttgtcatcctgaactgagaaaagtttctgttttgaaatatgcaggttgctagattaaaccctgagaagtccatcccatcatctattctaaagggagctaaggggcttgctgtgataacagttgccaaggcgggtgcagttcttacatacaaagttggcactggccttgtagttgcccgaagatcagatggatcatggtctgccccatcagcaattgcatctgttggcctgggatggggagttcaggtttttgtccaataaaatcttctctttctcaaatctcaatggttcaatgcacatgcatcatctgttgcttatgaacttactagatataaattcttgtggccttcaccaagaacaagaacctttatgttaataatttaagataggctgagcacaccggatttgcatttatgatttgccatatggatggtagtgcataagcaagttaattaacatagtcagtgctgatgtactccctccatccacaaaagttaaacatatttcacatttgagtttttccaaataagttgttcctatttgtagtctttatgcacccaagacttaaatgaagagataaattaaatgtttgattagaaccgagtcatctaaatactcattggttgcatgcttgcattcactccttggtcttggtgataaaagtaataggtgtaacttttgtggatggggggagtattttttttgtctaatgtgttactgcaatgctttgctttgctcgagtatatttaagtatgctgcatgtgcaaatcaatgtttacattcaacagaaagaagcaaatgatatggaaacagtgagaattctaatgagatgtactttatttttaggaattttatcttcctctgatggtggcttttttctttttccagtttggtggcgaactgacagattttataattgtacttcatgatcgtaaggctgtcaaggcattcagcagtcgcatgcatctttctcttggggcaggattaagtgcagcagcaggaccaattggcagggcctttgaagcagatgttagggccagtgaaaaaggttctgggctctgctacacttacagctgtagcaaaggtaataataagaaaactacctcttcacattattactacccttttcagagcatgtttatacattagaaatagcagattcagaagctagggtgaatattatcgacatattctaggatttttatcaactagaaagtcatgtacttctacacatggttatatcttttgcttgtcaaagaactagttagtgtccccaccttgatacagaaaacaaaatgtgcaatgttaatcaagttggcatcagataatattcttcttttttttgctttcatggtactttacatccttgagaaagtaaatgcaacatcgaactggtgataggttgacgaataaaaatttgtgacatgcaaatatctcagaacagaccttaataaccacattgatttttttttcttttttgagcaaggcaggaactctgccatatcaattacattaaaattgctaagagtttttttttaaacaaaaggctgtttgcgctgctttactttgaaagtgactccagctccgattgataaagtgcatatagaccaaccacaaagatgaaaagcagaggtccagacggctagcacacaccctctttgagaacctaaactttgctaagattattgaggctactgtgatttccttcaaaagattagataattgcggtgtaccacatggatgattgattgattttgttattttgaaacttgaaacaggtgcctttgttggggtctcattggaaggaaatgtcgtgacaaccagatcagagaccaatctacgcttctatggcgatgcttacttgaccacaactgatatcctgtttgggaaggtggagaaacccagagccgcccagcccctgtactcagctctagatgatctattctctaaaatggtttactagttctacgtgttcatgccaaaaaaaaaaaggaaaaaaagaaaaggaaaagctctccattactcattgatgtacacaatatgtatataaagaaaaaggtaggaaaatgtacagcttttaagtcctgttcggatgggtcgatttgggttaaaatcccttgcacgacttataggttcaaatgtgaaaaaggtcccaaagtattttataattcaagtacccaaatctgaacagaccaattggattgtgttccactgataatctctcggtacacatgtaaatattatcatgatatttcaggccctgttgttactttat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0616900, RefSeq:Os07g0616900